RNA–Protein interactions for RNA: ENST00000579316.5

CSNK1D-211, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 692 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-211ENST00000579316 UNGP13051 313 aaPredicted RBP13.54□□□□□ -0.24
CSNK1D-211ENST00000579316 CHRNB2P17787 502 aa13.54□□□□□ -0.24
CSNK1D-211ENST00000579316 HTR1EP28566 365 aa13.54□□□□□ -0.24
CSNK1D-211ENST00000579316 HADHAP40939 763 aa13.54□□□□□ -0.24
CSNK1D-211ENST00000579316 ARL4DP49703 201 aa13.54□□□□□ -0.24
CSNK1D-211ENST00000579316 GPR19Q15760 415 aa13.54□□□□□ -0.24
CSNK1D-211ENST00000579316 KLHDC7AQ5VTJ3 777 aa13.54□□□□□ -0.24
CSNK1D-211ENST00000579316 B3GNTL1Q67FW5 361 aaPredicted RBP13.54□□□□□ -0.24
CSNK1D-211ENST00000579316 KLHL35Q6PF15 583 aa13.54□□□□□ -0.24
CSNK1D-211ENST00000579316 SPOCD1Q6ZMY3 1216 aa13.54□□□□□ -0.24
CSNK1D-211ENST00000579316 CDH24Q86UP0 819 aa13.54□□□□□ -0.24
CSNK1D-211ENST00000579316 CARFQ8N187 725 aa13.54□□□□□ -0.24
CSNK1D-211ENST00000579316 PPP4R1Q8TF05 950 aa13.54□□□□□ -0.24
CSNK1D-211ENST00000579316 LYSMD1Q96S90 227 aa13.54□□□□□ -0.24
CSNK1D-211ENST00000579316 OR2AG1Q9H205 316 aa13.54□□□□□ -0.24
CSNK1D-211ENST00000579316 PCMTD2Q9NV79 361 aa13.54□□□□□ -0.24
CSNK1D-211ENST00000579316 GPATCH2LQ9NWQ4 482 aa13.54□□□□□ -0.24
CSNK1D-211ENST00000579316 ADAM22Q9P0K1 906 aa13.54□□□□□ -0.24
CSNK1D-211ENST00000579316 AP4E1Q9UPM8 1137 aa13.54□□□□□ -0.24
CSNK1D-211ENST00000579316 RGSL1A5PLK6 1076 aa13.53□□□□□ -0.24
CSNK1D-211ENST00000579316 LRRC10BA6NIK2 292 aa13.53□□□□□ -0.24
CSNK1D-211ENST00000579316 PRICKLE3O43900 615 aaPredicted RBP13.53□□□□□ -0.24
CSNK1D-211ENST00000579316 VEGFDO43915 354 aa13.53□□□□□ -0.24
CSNK1D-211ENST00000579316 SNRPB2P08579 225 aaKnown RBP13.53□□□□□ -0.24
CSNK1D-211ENST00000579316 ZNF7P17097 686 aaPredicted RBP13.53□□□□□ -0.24
CSNK1D-211ENST00000579316 FECHP22830 423 aa13.53□□□□□ -0.24
CSNK1D-211ENST00000579316 SPINT3P49223 89 aa13.53□□□□□ -0.24
CSNK1D-211ENST00000579316 MAXP61244 160 aa13.53□□□□□ -0.24
CSNK1D-211ENST00000579316 UBXN1Q04323 297 aa13.53□□□□□ -0.24
CSNK1D-211ENST00000579316 SEPT7Q16181 437 aaKnown RBP13.53□□□□□ -0.24
CSNK1D-211ENST00000579316 CA9Q16790 459 aa13.53□□□□□ -0.24
CSNK1D-211ENST00000579316 DNTTIP2Q5QJE6 756 aaKnown RBP13.53□□□□□ -0.24
CSNK1D-211ENST00000579316 PPP1R15BQ5SWA1 713 aa13.53□□□□□ -0.24
CSNK1D-211ENST00000579316 LUZP1Q86V48 1076 aa13.53□□□□□ -0.24
CSNK1D-211ENST00000579316 PHF13Q86YI8 300 aaPredicted RBP13.53□□□□□ -0.24
CSNK1D-211ENST00000579316 PARP9Q8IXQ6 854 aa13.53□□□□□ -0.24
CSNK1D-211ENST00000579316 SYTL1Q8IYJ3 562 aa13.53□□□□□ -0.24
CSNK1D-211ENST00000579316 BBS5Q8N3I7 341 aa13.53□□□□□ -0.24
CSNK1D-211ENST00000579316 ZNF808Q8N4W9 903 aaPredicted RBP13.53□□□□□ -0.24
CSNK1D-211ENST00000579316 CXorf40BQ96DE9 158 aa13.53□□□□□ -0.24
CSNK1D-211ENST00000579316 TRAPPC9Q96Q05 1148 aa13.53□□□□□ -0.24
CSNK1D-211ENST00000579316 DPH2Q9BQC3 489 aaPredicted RBP13.53□□□□□ -0.24
CSNK1D-211ENST00000579316 DHRS4Q9BTZ2 278 aa13.53□□□□□ -0.24
CSNK1D-211ENST00000579316 STK33Q9BYT3 514 aa13.53□□□□□ -0.24
CSNK1D-211ENST00000579316 HSD3B7Q9H2F3 369 aa13.53□□□□□ -0.24
CSNK1D-211ENST00000579316 FAM83DQ9H4H8 585 aa13.53□□□□□ -0.24
CSNK1D-211ENST00000579316 BTRCQ9Y297 605 aa13.53□□□□□ -0.24
CSNK1D-211ENST00000579316 PADI2Q9Y2J8 665 aa13.53□□□□□ -0.24
CSNK1D-211ENST00000579316 CSAG2Q9Y5P2 127 aa13.53□□□□□ -0.24
CSNK1D-211ENST00000579316 ACANP16112 2415 aa13.53□□□□□ -0.24
CSNK1D-211ENST00000579316 KMOO15229 486 aa13.52□□□□□ -0.25
CSNK1D-211ENST00000579316 KLF7O75840 302 aaPredicted RBP13.52□□□□□ -0.25
CSNK1D-211ENST00000579316 CLDN7O95471 211 aa13.52□□□□□ -0.25
CSNK1D-211ENST00000579316 ZBTB11O95625 1053 aaPredicted RBP13.52□□□□□ -0.25
CSNK1D-211ENST00000579316 SERPINC1P01008 464 aa13.52□□□□□ -0.25
CSNK1D-211ENST00000579316 CALB1P05937 261 aa13.52□□□□□ -0.25
CSNK1D-211ENST00000579316 ATP1A3P13637 1013 aa13.52□□□□□ -0.25
CSNK1D-211ENST00000579316 UCHL3P15374 230 aa13.52□□□□□ -0.25
CSNK1D-211ENST00000579316 OTX2P32243 289 aa13.52□□□□□ -0.25
CSNK1D-211ENST00000579316 NSFP46459 744 aaKnown RBP13.52□□□□□ -0.25
CSNK1D-211ENST00000579316 HCAR3P49019 387 aa13.52□□□□□ -0.25
CSNK1D-211ENST00000579316 KRTAP10-9P60411 292 aa13.52□□□□□ -0.25
CSNK1D-211ENST00000579316 OTUD4Q01804 1114 aaKnown RBP13.52□□□□□ -0.25
CSNK1D-211ENST00000579316 ABRQ12979 859 aa13.52□□□□□ -0.25
CSNK1D-211ENST00000579316 DPYSQ14117 519 aa13.52□□□□□ -0.25
CSNK1D-211ENST00000579316 INSCQ1MX18 579 aa13.52□□□□□ -0.25
CSNK1D-211ENST00000579316 ZNF789Q5FWF6 425 aa13.52□□□□□ -0.25
CSNK1D-211ENST00000579316 VWA2Q5GFL6 755 aa13.52□□□□□ -0.25
CSNK1D-211ENST00000579316 PRAMEF17Q5VTA0 474 aa13.52□□□□□ -0.25
CSNK1D-211ENST00000579316 FCRL6Q6DN72 434 aa13.52□□□□□ -0.25
CSNK1D-211ENST00000579316 CRTC3Q6UUV7 619 aa13.52□□□□□ -0.25
CSNK1D-211ENST00000579316 IGFL2Q6UWQ7 119 aa13.52□□□□□ -0.25
CSNK1D-211ENST00000579316 ADGRG6Q86SQ4 1221 aa13.52□□□□□ -0.25
CSNK1D-211ENST00000579316 KCTD15Q96SI1 283 aaPredicted RBP13.52□□□□□ -0.25
CSNK1D-211ENST00000579316 DHX35Q9H5Z1 703 aaKnown RBP13.52□□□□□ -0.25
CSNK1D-211ENST00000579316 TRIM39Q9HCM9 518 aa13.52□□□□□ -0.25
CSNK1D-211ENST00000579316 UBA6A0AVT1 1052 aaPredicted RBP13.51□□□□□ -0.25
CSNK1D-211ENST00000579316 ANKRD62A6NC57 917 aa13.51□□□□□ -0.25
CSNK1D-211ENST00000579316 OR5K3A6NET4 321 aa13.51□□□□□ -0.25
CSNK1D-211ENST00000579316 KCNN4O15554 427 aa13.51□□□□□ -0.25
CSNK1D-211ENST00000579316 DAPK3O43293 454 aa13.51□□□□□ -0.25
CSNK1D-211ENST00000579316 MAFKO60675 156 aa13.51□□□□□ -0.25
CSNK1D-211ENST00000579316 CD1EP15812 388 aa13.51□□□□□ -0.25
CSNK1D-211ENST00000579316 IDSP22304 550 aa13.51□□□□□ -0.25
CSNK1D-211ENST00000579316 RPL10P27635 214 aaKnown RBP13.51□□□□□ -0.25
CSNK1D-211ENST00000579316 MMP13P45452 471 aa13.51□□□□□ -0.25
CSNK1D-211ENST00000579316 ZNF135P52742 658 aaPredicted RBP13.51□□□□□ -0.25
CSNK1D-211ENST00000579316 RPL7AP62424 266 aaKnown RBP13.51□□□□□ -0.25
CSNK1D-211ENST00000579316 SSPNQ14714 243 aa13.51□□□□□ -0.25
CSNK1D-211ENST00000579316 PLCL1Q15111 1095 aa13.51□□□□□ -0.25
CSNK1D-211ENST00000579316 PLA2G4EQ3MJ16 856 aa13.51□□□□□ -0.25
CSNK1D-211ENST00000579316 TDRD12Q587J7 1177 aaKnown RBP13.51□□□□□ -0.25
CSNK1D-211ENST00000579316 TMTC4Q5T4D3 741 aa13.51□□□□□ -0.25
CSNK1D-211ENST00000579316 DNAJC24Q6P3W2 148 aa13.51□□□□□ -0.25
CSNK1D-211ENST00000579316 RPTNQ6XPR3 784 aa13.51□□□□□ -0.25
CSNK1D-211ENST00000579316 MRGPRGQ86SM5 289 aa13.51□□□□□ -0.25
CSNK1D-211ENST00000579316 LRRTM4Q86VH4 590 aa13.51□□□□□ -0.25
CSNK1D-211ENST00000579316 ZNF547Q8IVP9 402 aa13.51□□□□□ -0.25
CSNK1D-211ENST00000579316 MMP21Q8N119 569 aa13.51□□□□□ -0.25
CSNK1D-211ENST00000579316 CLIP3Q96DZ5 547 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms