RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 CCDC63Q8NA47 563 aa10.08□□□□□ -0.8
SS18-210ENST00000578700 OR2AP1Q8NGE2 309 aa10.08□□□□□ -0.8
SS18-210ENST00000578700 OR4C6Q8NH72 309 aa10.08□□□□□ -0.8
SS18-210ENST00000578700 MAPK15Q8TD08 544 aa10.08□□□□□ -0.8
SS18-210ENST00000578700 STYXQ8WUJ0 223 aa10.08□□□□□ -0.8
SS18-210ENST00000578700 OR8D1Q8WZ84 308 aa10.08□□□□□ -0.8
SS18-210ENST00000578700 GRAMD1AQ96CP6 724 aa10.08□□□□□ -0.8
SS18-210ENST00000578700 TSPAN17Q96FV3 270 aa10.08□□□□□ -0.8
SS18-210ENST00000578700 WBP1Q96G27 269 aa10.08□□□□□ -0.8
SS18-210ENST00000578700 HIC2Q96JB3 615 aa10.08□□□□□ -0.8
SS18-210ENST00000578700 VPS39Q96JC1 886 aa10.08□□□□□ -0.8
SS18-210ENST00000578700 ZNF778Q96MU6 729 aa10.08□□□□□ -0.8
SS18-210ENST00000578700 TUBGCP5Q96RT8 1024 aa10.08□□□□□ -0.8
SS18-210ENST00000578700 TRIB3Q96RU7 358 aa10.08□□□□□ -0.8
SS18-210ENST00000578700 AGAP2Q99490 1192 aa10.08□□□□□ -0.8
SS18-210ENST00000578700 TM6SF2Q9BZW4 377 aa10.08□□□□□ -0.8
SS18-210ENST00000578700 VPS11Q9H270 941 aa10.08□□□□□ -0.8
SS18-210ENST00000578700 POLR1BQ9H9Y6 1135 aa10.08□□□□□ -0.8
SS18-210ENST00000578700 MLXIPLQ9NP71 852 aa10.08□□□□□ -0.8
SS18-210ENST00000578700 IL1RAPL1Q9NZN1 696 aa10.08□□□□□ -0.8
SS18-210ENST00000578700 DMTF1Q9Y222 760 aa10.08□□□□□ -0.8
SS18-210ENST00000578700 HS3ST2Q9Y278 367 aa10.08□□□□□ -0.8
SS18-210ENST00000578700 VPS9D1Q9Y2B5 631 aa10.08□□□□□ -0.8
SS18-210ENST00000578700 PCDHGC4Q9Y5F7 938 aa10.08□□□□□ -0.8
SS18-210ENST00000578700 ACTL7AQ9Y615 435 aa10.08□□□□□ -0.8
SS18-210ENST00000578700 PSAT1Q9Y617 370 aa10.08□□□□□ -0.8
SS18-210ENST00000578700 CPED1A4D0V7 1026 aa10.07□□□□□ -0.8
SS18-210ENST00000578700 ERICH4A6NGS2 130 aa10.07□□□□□ -0.8
SS18-210ENST00000578700 TCP11X1B4DZS4 312 aa10.07□□□□□ -0.8
SS18-210ENST00000578700 ANKRD66B4E2M5 251 aa10.07□□□□□ -0.8
SS18-210ENST00000578700 C10orf142B7Z368 130 aa10.07□□□□□ -0.8
SS18-210ENST00000578700 C1QTNF3-AMACRE9PGA6 284 aa10.07□□□□□ -0.8
SS18-210ENST00000578700 GOLGA8TH3BQL2 631 aa10.07□□□□□ -0.8
SS18-210ENST00000578700 EBAG9O00559 213 aa10.07□□□□□ -0.8
SS18-210ENST00000578700 STX7O15400 261 aaKnown RBP10.07□□□□□ -0.8
SS18-210ENST00000578700 PLRG1O43660 514 aaKnown RBP10.07□□□□□ -0.8
SS18-210ENST00000578700 WISP1O95388 367 aa10.07□□□□□ -0.8
SS18-210ENST00000578700 ASMTLO95671 621 aa10.07□□□□□ -0.8
SS18-210ENST00000578700 APOA4P06727 396 aa10.07□□□□□ -0.8
SS18-210ENST00000578700 GSTA1P08263 222 aa10.07□□□□□ -0.8
SS18-210ENST00000578700 LPOP22079 712 aaPredicted RBP10.07□□□□□ -0.8
SS18-210ENST00000578700 CRABP2P29373 138 aa10.07□□□□□ -0.8
SS18-210ENST00000578700 RBMS1P29558 406 aaKnown RBP10.07□□□□□ -0.8
SS18-210ENST00000578700 PPARGP37231 505 aaPredicted RBP10.07□□□□□ -0.8
SS18-210ENST00000578700 ARCN1P48444 511 aaKnown RBP10.07□□□□□ -0.8
SS18-210ENST00000578700 LSSP48449 732 aa10.07□□□□□ -0.8
SS18-210ENST00000578700 CLDN2P57739 230 aa10.07□□□□□ -0.8
SS18-210ENST00000578700 POLR2LP62875 67 aaKnown RBP10.07□□□□□ -0.8
SS18-210ENST00000578700 MPP2Q14168 576 aa10.07□□□□□ -0.8
SS18-210ENST00000578700 USP10Q14694 798 aaKnown RBP10.07□□□□□ -0.8
SS18-210ENST00000578700 PDK4Q16654 411 aa10.07□□□□□ -0.8
SS18-210ENST00000578700 ZSCAN26Q16670 478 aa10.07□□□□□ -0.8
SS18-210ENST00000578700 FASTKD1Q53R41 847 aaKnown RBP10.07□□□□□ -0.8
SS18-210ENST00000578700 AARS2Q5JTZ9 985 aaKnown RBP10.07□□□□□ -0.8
SS18-210ENST00000578700 ATXN7L2Q5T6C5 722 aaPredicted RBP10.07□□□□□ -0.8
SS18-210ENST00000578700 ATG16L1Q676U5 607 aa10.07□□□□□ -0.8
SS18-210ENST00000578700 C22orf39Q6P5X5 142 aa10.07□□□□□ -0.8
SS18-210ENST00000578700 AFTPHQ6ULP2 937 aa10.07□□□□□ -0.8
SS18-210ENST00000578700 CRTC1Q6UUV9 634 aa10.07□□□□□ -0.8
SS18-210ENST00000578700 CCDC91Q7Z6B0 441 aa10.07□□□□□ -0.8
SS18-210ENST00000578700 DSG4Q86SJ6 1040 aa10.07□□□□□ -0.8
SS18-210ENST00000578700 PPP1R14CQ8TAE6 165 aa10.07□□□□□ -0.8
SS18-210ENST00000578700 IFI44Q8TCB0 444 aa10.07□□□□□ -0.8
SS18-210ENST00000578700 DENND1AQ8TEH3 1009 aa10.07□□□□□ -0.8
SS18-210ENST00000578700 ZNF473Q8WTR7 871 aaKnown RBP10.07□□□□□ -0.8
SS18-210ENST00000578700 SCG3Q8WXD2 468 aaKnown RBP10.07□□□□□ -0.8
SS18-210ENST00000578700 TTC9Q92623 222 aa10.07□□□□□ -0.8
SS18-210ENST00000578700 HDAC10Q969S8 669 aa10.07□□□□□ -0.8
SS18-210ENST00000578700 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.07□□□□□ -0.8
SS18-210ENST00000578700 ATXN7L3BQ96GX2 97 aa10.07□□□□□ -0.8
SS18-210ENST00000578700 APOLD1Q96LR9 279 aa10.07□□□□□ -0.8
SS18-210ENST00000578700 FAM111AQ96PZ2 611 aa10.07□□□□□ -0.8
SS18-210ENST00000578700 TTC1Q99614 292 aa10.07□□□□□ -0.8
SS18-210ENST00000578700 GPR63Q9BZJ6 419 aa10.07□□□□□ -0.8
SS18-210ENST00000578700 TRIM4Q9C037 500 aa10.07□□□□□ -0.8
SS18-210ENST00000578700 KDM4CQ9H3R0 1056 aa10.07□□□□□ -0.8
SS18-210ENST00000578700 SNX15Q9NRS6 342 aa10.07□□□□□ -0.8
SS18-210ENST00000578700 THSD1Q9NS62 852 aa10.07□□□□□ -0.8
SS18-210ENST00000578700 SLC17A6Q9P2U8 582 aa10.07□□□□□ -0.8
SS18-210ENST00000578700 SLC2A6Q9UGQ3 507 aa10.07□□□□□ -0.8
SS18-210ENST00000578700 MID2Q9UJV3 735 aa10.07□□□□□ -0.8
SS18-210ENST00000578700 FBXO5Q9UKT4 447 aa10.07□□□□□ -0.8
SS18-210ENST00000578700 SLC39A10Q9ULF5 831 aa10.07□□□□□ -0.8
SS18-210ENST00000578700 SATB2Q9UPW6 733 aa10.07□□□□□ -0.8
SS18-210ENST00000578700 PLLPQ9Y342 182 aa10.07□□□□□ -0.8
SS18-210ENST00000578700 PKP3Q9Y446 797 aa10.07□□□□□ -0.8
SS18-210ENST00000578700 A0A1W2PQU0 124 aa10.06□□□□□ -0.8
SS18-210ENST00000578700 K7ERQ8 282 aa10.06□□□□□ -0.8
SS18-210ENST00000578700 CD3EAPO15446 510 aaKnown RBP10.06□□□□□ -0.8
SS18-210ENST00000578700 SMAD6O43541 496 aaKnown RBP10.06□□□□□ -0.8
SS18-210ENST00000578700 LDB2O43679 373 aa10.06□□□□□ -0.8
SS18-210ENST00000578700 PIAS2O75928 621 aa10.06□□□□□ -0.8
SS18-210ENST00000578700 PCDH8O95206 1070 aa10.06□□□□□ -0.8
SS18-210ENST00000578700 PGLSO95336 258 aa10.06□□□□□ -0.8
SS18-210ENST00000578700 POP4O95707 220 aaKnown RBP10.06□□□□□ -0.8
SS18-210ENST00000578700 CD160O95971 181 aa10.06□□□□□ -0.8
SS18-210ENST00000578700 MT-CO1P00395 513 aa10.06□□□□□ -0.8
SS18-210ENST00000578700 CKMT1AP12532 417 aa10.06□□□□□ -0.8
SS18-210ENST00000578700 SRCP12931 536 aa10.06□□□□□ -0.8
SS18-210ENST00000578700 STMN1P16949 149 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms