RNA–Protein interactions for RNA: ENST00000578010.1

PPP4R1-207, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-207ENST00000578010 PEX13Q92968 403 aa6.6□□□□□ -1.35
PPP4R1-207ENST00000578010 LRRC39Q96DD0 335 aa6.6□□□□□ -1.35
PPP4R1-207ENST00000578010 LRRC61Q9BV99 259 aa6.6□□□□□ -1.35
PPP4R1-207ENST00000578010 DUSP23Q9BVJ7 150 aa6.6□□□□□ -1.35
PPP4R1-207ENST00000578010 BOCQ9BWV1 1114 aa6.6□□□□□ -1.35
PPP4R1-207ENST00000578010 CLPBQ9H078 707 aa6.6□□□□□ -1.35
PPP4R1-207ENST00000578010 OSGEPL1Q9H4B0 414 aa6.6□□□□□ -1.35
PPP4R1-207ENST00000578010 GPR27Q9NS67 375 aa6.6□□□□□ -1.35
PPP4R1-207ENST00000578010 IARS2Q9NSE4 1012 aaKnown RBP6.6□□□□□ -1.35
PPP4R1-207ENST00000578010 KLC4Q9NSK0 619 aa6.6□□□□□ -1.35
PPP4R1-207ENST00000578010 TREX1Q9NSU2 369 aa6.6□□□□□ -1.35
PPP4R1-207ENST00000578010 TRNAU1APQ9NX07 287 aaKnown RBP6.6□□□□□ -1.35
PPP4R1-207ENST00000578010 GRHL1Q9NZI5 618 aa6.6□□□□□ -1.35
PPP4R1-207ENST00000578010 IL1RAPL1Q9NZN1 696 aa6.6□□□□□ -1.35
PPP4R1-207ENST00000578010 VPS18Q9P253 973 aa6.6□□□□□ -1.35
PPP4R1-207ENST00000578010 FAM8A1Q9UBU6 413 aa6.6□□□□□ -1.35
PPP4R1-207ENST00000578010 MTRF1LQ9UGC7 380 aaKnown RBP6.6□□□□□ -1.35
PPP4R1-207ENST00000578010 SLC23A2Q9UGH3 650 aa6.6□□□□□ -1.35
PPP4R1-207ENST00000578010 DMGDHQ9UI17 866 aaKnown RBP6.6□□□□□ -1.35
PPP4R1-207ENST00000578010 CHMP2BQ9UQN3 213 aa6.6□□□□□ -1.35
PPP4R1-207ENST00000578010 BTBD3Q9Y2F9 522 aa6.6□□□□□ -1.35
PPP4R1-207ENST00000578010 CSNK1G3Q9Y6M4 447 aa6.6□□□□□ -1.35
PPP4R1-207ENST00000578010 DOCK9Q9BZ29 2069 aa6.6□□□□□ -1.35
PPP4R1-207ENST00000578010 TRPM6Q9BX84 2022 aa6.59□□□□□ -1.35
PPP4R1-207ENST00000578010 UBA6A0AVT1 1052 aaPredicted RBP6.59□□□□□ -1.35
PPP4R1-207ENST00000578010 B4DGG1 531 aa6.59□□□□□ -1.35
PPP4R1-207ENST00000578010 GPR89AB7ZAQ6 455 aa6.59□□□□□ -1.35
PPP4R1-207ENST00000578010 LMO7DNF2Z398 122 aa6.59□□□□□ -1.35
PPP4R1-207ENST00000578010 TPP1O14773 563 aa6.59□□□□□ -1.35
PPP4R1-207ENST00000578010 EIF3HO15372 352 aaKnown RBP eCLIP6.59□□□□□ -1.35
PPP4R1-207ENST00000578010 FLRT2O43155 660 aa6.59□□□□□ -1.35
PPP4R1-207ENST00000578010 OR1I1O60431 355 aa6.59□□□□□ -1.35
PPP4R1-207ENST00000578010 KCNJ13O60928 360 aa6.59□□□□□ -1.35
PPP4R1-207ENST00000578010 SLU7O95391 586 aaKnown RBP6.59□□□□□ -1.35
PPP4R1-207ENST00000578010 OR56A5P0C7T3 313 aa6.59□□□□□ -1.35
PPP4R1-207ENST00000578010 GPR89BP0CG08 455 aa6.59□□□□□ -1.35
PPP4R1-207ENST00000578010 CHRM3P20309 590 aa6.59□□□□□ -1.35
PPP4R1-207ENST00000578010 IDSP22304 550 aa6.59□□□□□ -1.35
PPP4R1-207ENST00000578010 FOXN2P32314 431 aa6.59□□□□□ -1.35
PPP4R1-207ENST00000578010 NSG1P42857 185 aa6.59□□□□□ -1.35
PPP4R1-207ENST00000578010 MAGEA3P43357 314 aa6.59□□□□□ -1.35
PPP4R1-207ENST00000578010 MAGEA4P43358 317 aa6.59□□□□□ -1.35
PPP4R1-207ENST00000578010 ARCN1P48444 511 aaKnown RBP6.59□□□□□ -1.35
PPP4R1-207ENST00000578010 TTPAP49638 278 aa6.59□□□□□ -1.35
PPP4R1-207ENST00000578010 DUSP3P51452 185 aaPredicted RBP6.59□□□□□ -1.35
PPP4R1-207ENST00000578010 NOVA1P51513 510 aaKnown RBP6.59□□□□□ -1.35
PPP4R1-207ENST00000578010 CTSCP53634 463 aa6.59□□□□□ -1.35
PPP4R1-207ENST00000578010 LIMK1P53667 647 aa6.59□□□□□ -1.35
PPP4R1-207ENST00000578010 ACVR1Q04771 509 aa6.59□□□□□ -1.35
PPP4R1-207ENST00000578010 CTBP1Q13363 440 aa6.59□□□□□ -1.35
PPP4R1-207ENST00000578010 KRT33BQ14525 404 aa6.59□□□□□ -1.35
PPP4R1-207ENST00000578010 ITIH4Q14624 930 aa6.59□□□□□ -1.35
PPP4R1-207ENST00000578010 BRD3Q15059 726 aa6.59□□□□□ -1.35
PPP4R1-207ENST00000578010 NR0B2Q15466 257 aa6.59□□□□□ -1.35
PPP4R1-207ENST00000578010 TRIP6Q15654 476 aaKnown RBP6.59□□□□□ -1.35
PPP4R1-207ENST00000578010 ARMC3Q5W041 872 aa6.59□□□□□ -1.35
PPP4R1-207ENST00000578010 KIAA0930Q6ICG6 404 aaPredicted RBP6.59□□□□□ -1.35
PPP4R1-207ENST00000578010 LVRNQ6Q4G3 990 aa6.59□□□□□ -1.35
PPP4R1-207ENST00000578010 ZDHHC24Q6UX98 284 aa6.59□□□□□ -1.35
PPP4R1-207ENST00000578010 UNC5AQ6ZN44 842 aa6.59□□□□□ -1.35
PPP4R1-207ENST00000578010 DBX2Q6ZNG2 339 aa6.59□□□□□ -1.35
PPP4R1-207ENST00000578010 CEP128Q6ZU80 1094 aa6.59□□□□□ -1.35
PPP4R1-207ENST00000578010 NRROSQ86YC3 692 aa6.59□□□□□ -1.35
PPP4R1-207ENST00000578010 UNC5BQ8IZJ1 945 aa6.59□□□□□ -1.35
PPP4R1-207ENST00000578010 AGGF1Q8N302 714 aaeCLIP6.59□□□□□ -1.358e-17■■■■■ 39.9
PPP4R1-207ENST00000578010 SDR16C5Q8N3Y7 309 aa6.59□□□□□ -1.35
PPP4R1-207ENST00000578010 LRRN4CLQ8ND94 238 aa6.59□□□□□ -1.35
PPP4R1-207ENST00000578010 DDHD1Q8NEL9 900 aa6.59□□□□□ -1.35
PPP4R1-207ENST00000578010 CALML6Q8TD86 181 aa6.59□□□□□ -1.35
PPP4R1-207ENST00000578010 GPBAR1Q8TDU6 330 aa6.59□□□□□ -1.35
PPP4R1-207ENST00000578010 ZDHHC1Q8WTX9 485 aa6.59□□□□□ -1.35
PPP4R1-207ENST00000578010 SCARF2Q96GP6 870 aaPredicted RBP6.59□□□□□ -1.35
PPP4R1-207ENST00000578010 SGSM3Q96HU1 749 aa6.59□□□□□ -1.35
PPP4R1-207ENST00000578010 ZNF514Q96K75 400 aaPredicted RBP6.59□□□□□ -1.35
PPP4R1-207ENST00000578010 CNDP2Q96KP4 475 aaKnown RBP6.59□□□□□ -1.35
PPP4R1-207ENST00000578010 CDC6Q99741 560 aa6.59□□□□□ -1.35
PPP4R1-207ENST00000578010 CCM2Q9BSQ5 444 aa6.59□□□□□ -1.35
PPP4R1-207ENST00000578010 FOXP3Q9BZS1 431 aa6.59□□□□□ -1.35
PPP4R1-207ENST00000578010 TSPYL1Q9H0U9 437 aa6.59□□□□□ -1.35
PPP4R1-207ENST00000578010 VPS37BQ9H9H4 285 aa6.59□□□□□ -1.35
PPP4R1-207ENST00000578010 L2HGDHQ9H9P8 463 aa6.59□□□□□ -1.35
PPP4R1-207ENST00000578010 SPATS2LQ9NUQ6 558 aaKnown RBP6.59□□□□□ -1.35
PPP4R1-207ENST00000578010 SMOXQ9NWM0 555 aa6.59□□□□□ -1.35
PPP4R1-207ENST00000578010 NLGN3Q9NZ94 848 aa6.59□□□□□ -1.35
PPP4R1-207ENST00000578010 TAAR2Q9P1P5 351 aa6.59□□□□□ -1.35
PPP4R1-207ENST00000578010 MARCH4Q9P2E8 410 aaPredicted RBP6.59□□□□□ -1.35
PPP4R1-207ENST00000578010 FTSJ1Q9UET6 329 aa6.59□□□□□ -1.35
PPP4R1-207ENST00000578010 CRYL1Q9Y2S2 319 aa6.59□□□□□ -1.35
PPP4R1-207ENST00000578010 PCYT1BQ9Y5K3 369 aaPredicted RBP6.59□□□□□ -1.35
PPP4R1-207ENST00000578010 TEX264Q9Y6I9 313 aa6.59□□□□□ -1.35
PPP4R1-207ENST00000578010 DNMT3AQ9Y6K1 912 aaPredicted RBP6.59□□□□□ -1.35
PPP4R1-207ENST00000578010 PRSS21Q9Y6M0 314 aa6.59□□□□□ -1.35
PPP4R1-207ENST00000578010 SDK1Q7Z5N4 2213 aa6.59□□□□□ -1.35
PPP4R1-207ENST00000578010 GPR179Q6PRD1 2367 aa6.59□□□□□ -1.35
PPP4R1-207ENST00000578010 CACNA1HO95180 2353 aa6.58□□□□□ -1.36
PPP4R1-207ENST00000578010 TRBV5-4A0A0C4DH59 114 aa6.58□□□□□ -1.36
PPP4R1-207ENST00000578010 ZCWPW2A0A1B0GU75 182 aa6.58□□□□□ -1.36
PPP4R1-207ENST00000578010 SPAARA0A1B0GVQ0 90 aa6.58□□□□□ -1.36
PPP4R1-207ENST00000578010 MGAT4DA6NG13 374 aa6.58□□□□□ -1.36
PPP4R1-207ENST00000578010 AGAP14A8MT82 685 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms