RNA–Protein interactions for RNA: ENST00000574872.1

PFN1-203, Transcript of profilin 1, humanhuman

TSL 2 BASIC

Gene PFN1, Length 1,173 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-203ENST00000574872 ARL10Q8N8L6 244 aa16■□□□□ 0.15
PFN1-203ENST00000574872 ZDHHC1Q8WTX9 485 aa16■□□□□ 0.15
PFN1-203ENST00000574872 CDC6Q99741 560 aa16■□□□□ 0.15
PFN1-203ENST00000574872 PPANQ9NQ55 473 aaKnown RBP16■□□□□ 0.15
PFN1-203ENST00000574872 PRDM8Q9NQV8 689 aa16■□□□□ 0.15
PFN1-203ENST00000574872 IARS2Q9NSE4 1012 aaKnown RBP16■□□□□ 0.15
PFN1-203ENST00000574872 ZDHHC18Q9NUE0 388 aa16■□□□□ 0.15
PFN1-203ENST00000574872 TBC1D29Q9UFV1 150 aa16■□□□□ 0.15
PFN1-203ENST00000574872 U3KQA8 63 aa16■□□□□ 0.15
PFN1-203ENST00000574872 PCNX2A6NKB5 2137 aa16■□□□□ 0.15
PFN1-203ENST00000574872 ARHGEF17Q96PE2 2063 aaPredicted RBP15.99■□□□□ 0.15
PFN1-203ENST00000574872 TRBV23OR9-2A0A075B6M9 112 aa15.99■□□□□ 0.15
PFN1-203ENST00000574872 UBA6A0AVT1 1052 aaPredicted RBP15.99■□□□□ 0.15
PFN1-203ENST00000574872 NOBOXO60393 691 aa15.99■□□□□ 0.15
PFN1-203ENST00000574872 VCLP18206 1134 aa15.99■□□□□ 0.15
PFN1-203ENST00000574872 ITGB6P18564 788 aa15.99■□□□□ 0.15
PFN1-203ENST00000574872 RPL10P27635 214 aaKnown RBP15.99■□□□□ 0.15
PFN1-203ENST00000574872 SLC1A2P43004 574 aa15.99■□□□□ 0.15
PFN1-203ENST00000574872 EIF3BP55884 814 aaKnown RBP15.99■□□□□ 0.15
PFN1-203ENST00000574872 MAZP56270 477 aaKnown RBP15.99■□□□□ 0.15
PFN1-203ENST00000574872 SIM1P81133 766 aaPredicted RBP15.99■□□□□ 0.15
PFN1-203ENST00000574872 CTBP1Q13363 440 aa15.99■□□□□ 0.15
PFN1-203ENST00000574872 NFE2L1Q14494 772 aa15.99■□□□□ 0.15
PFN1-203ENST00000574872 PUM1Q14671 1186 aaKnown RBP eCLIP15.99■□□□□ 0.154e-8■□□□□ 10.6
PFN1-203ENST00000574872 NR0B2Q15466 257 aa15.99■□□□□ 0.15
PFN1-203ENST00000574872 STEAP4Q687X5 459 aa15.99■□□□□ 0.15
PFN1-203ENST00000574872 CILP2Q8IUL8 1156 aa15.99■□□□□ 0.15
PFN1-203ENST00000574872 CCNJLQ8IV13 435 aa15.99■□□□□ 0.15
PFN1-203ENST00000574872 FAM181AQ8N9Y4 354 aa15.99■□□□□ 0.15
PFN1-203ENST00000574872 GPR150Q8NGU9 434 aa15.99■□□□□ 0.15
PFN1-203ENST00000574872 PYROXD1Q8WU10 500 aa15.99■□□□□ 0.15
PFN1-203ENST00000574872 CERS2Q96G23 380 aa15.99■□□□□ 0.15
PFN1-203ENST00000574872 FBXO6Q9NRD1 293 aaPredicted RBP15.99■□□□□ 0.15
PFN1-203ENST00000574872 SLC17A6Q9P2U8 582 aa15.99■□□□□ 0.15
PFN1-203ENST00000574872 SPTBN2O15020 2390 aa15.99■□□□□ 0.15
PFN1-203ENST00000574872 DCHS1Q96JQ0 3298 aa15.98■□□□□ 0.15
PFN1-203ENST00000574872 CPED1A4D0V7 1026 aa15.98■□□□□ 0.15
PFN1-203ENST00000574872 PDZK1P1A8MUH7 402 aa15.98■□□□□ 0.15
PFN1-203ENST00000574872 PRMT5O14744 637 aaPredicted RBP15.98■□□□□ 0.15
PFN1-203ENST00000574872 EIF3HO15372 352 aaKnown RBP eCLIP15.98■□□□□ 0.15
PFN1-203ENST00000574872 TNFSF14O43557 240 aa15.98■□□□□ 0.15
PFN1-203ENST00000574872 AP2A2O94973 939 aa15.98■□□□□ 0.15
PFN1-203ENST00000574872 CEACAM1P13688 526 aa15.98■□□□□ 0.15
PFN1-203ENST00000574872 OGNP20774 298 aaKnown RBP15.98■□□□□ 0.15
PFN1-203ENST00000574872 FMO4P31512 558 aa15.98■□□□□ 0.15
PFN1-203ENST00000574872 CARSP49589 748 aaKnown RBP15.98■□□□□ 0.15
PFN1-203ENST00000574872 MPP1Q00013 466 aa15.98■□□□□ 0.15
PFN1-203ENST00000574872 TYSND1Q2T9J0 566 aa15.98■□□□□ 0.15
PFN1-203ENST00000574872 ZNF789Q5FWF6 425 aa15.98■□□□□ 0.15
PFN1-203ENST00000574872 GUSBP11Q6P575 273 aa15.98■□□□□ 0.15
PFN1-203ENST00000574872 NAGSQ8N159 534 aa15.98■□□□□ 0.15
PFN1-203ENST00000574872 LILRA3Q8N6C8 439 aaPredicted RBP15.98■□□□□ 0.15
PFN1-203ENST00000574872 GLMNQ92990 594 aa15.98■□□□□ 0.15
PFN1-203ENST00000574872 C9orf72Q96LT7 481 aa15.98■□□□□ 0.15
PFN1-203ENST00000574872 FAM167BQ9BTA0 163 aa15.98■□□□□ 0.15
PFN1-203ENST00000574872 CRYL1Q9Y2S2 319 aa15.98■□□□□ 0.15
PFN1-203ENST00000574872 DNMT3AQ9Y6K1 912 aaPredicted RBP15.98■□□□□ 0.15
PFN1-203ENST00000574872 ZFC3H1O60293 1989 aaKnown RBP15.98■□□□□ 0.15
PFN1-203ENST00000574872 COL5A1P20908 1838 aaPredicted RBP15.97■□□□□ 0.15
PFN1-203ENST00000574872 MGAT4DA6NG13 374 aa15.97■□□□□ 0.15
PFN1-203ENST00000574872 PRR19A6NJB7 356 aa15.97■□□□□ 0.15
PFN1-203ENST00000574872 IQCF5A8MTL0 148 aa15.97■□□□□ 0.15
PFN1-203ENST00000574872 OR56A5P0C7T3 313 aa15.97■□□□□ 0.15
PFN1-203ENST00000574872 CKMT1AP12532 417 aa15.97■□□□□ 0.15
PFN1-203ENST00000574872 CKMT2P17540 419 aa15.97■□□□□ 0.15
PFN1-203ENST00000574872 IDSP22304 550 aa15.97■□□□□ 0.15
PFN1-203ENST00000574872 ECHS1P30084 290 aa15.97■□□□□ 0.15
PFN1-203ENST00000574872 MAGEA4P43358 317 aa15.97■□□□□ 0.15
PFN1-203ENST00000574872 RPIAP49247 311 aa15.97■□□□□ 0.15
PFN1-203ENST00000574872 CLCNKAP51800 687 aa15.97■□□□□ 0.15
PFN1-203ENST00000574872 C14orf28Q4W4Y0 310 aa15.97■□□□□ 0.15
PFN1-203ENST00000574872 PPM1JQ5JR12 505 aa15.97■□□□□ 0.15
PFN1-203ENST00000574872 RNF187Q5TA31 235 aaPredicted RBP15.97■□□□□ 0.15
PFN1-203ENST00000574872 PTRHD1Q6GMV3 140 aaKnown RBP15.97■□□□□ 0.15
PFN1-203ENST00000574872 OGFOD3Q6PK18 319 aa15.97■□□□□ 0.15
PFN1-203ENST00000574872 NAPRTQ6XQN6 538 aa15.97■□□□□ 0.15
PFN1-203ENST00000574872 EFL1Q7Z2Z2 1120 aaKnown RBP15.97■□□□□ 0.15
PFN1-203ENST00000574872 PALM2Q8IXS6 379 aa15.97■□□□□ 0.15
PFN1-203ENST00000574872 CFAP206Q8IYR0 622 aa15.97■□□□□ 0.15
PFN1-203ENST00000574872 KRT222Q8N1A0 295 aa15.97■□□□□ 0.15
PFN1-203ENST00000574872 GPR156Q8NFN8 814 aa15.97■□□□□ 0.15
PFN1-203ENST00000574872 OR2L2Q8NH16 312 aa15.97■□□□□ 0.15
PFN1-203ENST00000574872 GSDMBQ8TAX9 411 aa15.97■□□□□ 0.15
PFN1-203ENST00000574872 HM13Q8TCT9 377 aa15.97■□□□□ 0.15
PFN1-203ENST00000574872 LKAAEAR1Q8TD35 194 aa15.97■□□□□ 0.15
PFN1-203ENST00000574872 CALML6Q8TD86 181 aa15.97■□□□□ 0.15
PFN1-203ENST00000574872 LPGAT1Q92604 370 aa15.97■□□□□ 0.15
PFN1-203ENST00000574872 LINC00615Q96LM1 132 aaPredicted RBP15.97■□□□□ 0.15
PFN1-203ENST00000574872 CCM2Q9BSQ5 444 aa15.97■□□□□ 0.15
PFN1-203ENST00000574872 FOXP3Q9BZS1 431 aa15.97■□□□□ 0.15
PFN1-203ENST00000574872 VPS37BQ9H9H4 285 aa15.97■□□□□ 0.15
PFN1-203ENST00000574872 SCHIP1Q9P0W5 487 aaPredicted RBP15.97■□□□□ 0.15
PFN1-203ENST00000574872 MTRF1LQ9UGC7 380 aaKnown RBP15.97■□□□□ 0.15
PFN1-203ENST00000574872 FBXO5Q9UKT4 447 aa15.97■□□□□ 0.15
PFN1-203ENST00000574872 PADI4Q9UM07 663 aa15.97■□□□□ 0.15
PFN1-203ENST00000574872 PSMD13Q9UNM6 376 aa15.97■□□□□ 0.15
PFN1-203ENST00000574872 A6NCN8 305 aa15.96■□□□□ 0.15
PFN1-203ENST00000574872 PFDN6O15212 129 aa15.96■□□□□ 0.15
PFN1-203ENST00000574872 TRIM16O95361 564 aa15.96■□□□□ 0.15
PFN1-203ENST00000574872 S1PR4O95977 384 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms