RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 CACNG4Q9UBN1 327 aa9.48□□□□□ -0.89
CCDC40-212ENST00000574799 ISPDA4D126 451 aa9.48□□□□□ -0.89
CCDC40-212ENST00000574799 AP2A1O95782 977 aa9.48□□□□□ -0.89
CCDC40-212ENST00000574799 CAPN3P20807 821 aa9.48□□□□□ -0.89
CCDC40-212ENST00000574799 SLC6A2P23975 617 aa9.48□□□□□ -0.89
CCDC40-212ENST00000574799 LMO2P25791 158 aa9.48□□□□□ -0.89
CCDC40-212ENST00000574799 IFITM2Q01629 132 aa9.48□□□□□ -0.89
CCDC40-212ENST00000574799 KCNC4Q03721 635 aa9.48□□□□□ -0.89
CCDC40-212ENST00000574799 FAM219BQ5XKK7 198 aa9.48□□□□□ -0.89
CCDC40-212ENST00000574799 STEAP3Q658P3 488 aa9.48□□□□□ -0.89
CCDC40-212ENST00000574799 SMYD5Q6GMV2 418 aa9.48□□□□□ -0.89
CCDC40-212ENST00000574799 AHSA2Q719I0 299 aa9.48□□□□□ -0.89
CCDC40-212ENST00000574799 TFAP2DQ7Z6R9 452 aa9.48□□□□□ -0.89
CCDC40-212ENST00000574799 HS3ST5Q8IZT8 346 aa9.48□□□□□ -0.89
CCDC40-212ENST00000574799 OR52K2Q8NGK3 314 aa9.48□□□□□ -0.89
CCDC40-212ENST00000574799 RHOXF1Q8NHV9 184 aa9.48□□□□□ -0.89
CCDC40-212ENST00000574799 SLC35F5Q8WV83 523 aa9.48□□□□□ -0.89
CCDC40-212ENST00000574799 RPL3LQ92901 407 aaKnown RBP9.48□□□□□ -0.89
CCDC40-212ENST00000574799 CELF6Q96J87 481 aaKnown RBP9.48□□□□□ -0.89
CCDC40-212ENST00000574799 UGT2B28Q9BY64 529 aa9.48□□□□□ -0.89
CCDC40-212ENST00000574799 ARHGAP39Q9C0H5 1083 aa9.48□□□□□ -0.89
CCDC40-212ENST00000574799 C12orf4Q9NQ89 552 aa9.48□□□□□ -0.89
CCDC40-212ENST00000574799 TMEM30AQ9NV96 361 aa9.48□□□□□ -0.89
CCDC40-212ENST00000574799 ERVK-18Q9QC07 812 aa9.48□□□□□ -0.89
CCDC40-212ENST00000574799 PCDHGA11Q9Y5H2 935 aa9.48□□□□□ -0.89
CCDC40-212ENST00000574799 N6AMT1Q9Y5N5 214 aa9.48□□□□□ -0.89
CCDC40-212ENST00000574799 VWA8A3KMH1 1905 aa9.48□□□□□ -0.89
CCDC40-212ENST00000574799 A8MT66 165 aa9.48□□□□□ -0.89
CCDC40-212ENST00000574799 DLGAP1O14490 977 aa9.48□□□□□ -0.89
CCDC40-212ENST00000574799 PIP5K1BO14986 540 aa9.48□□□□□ -0.89
CCDC40-212ENST00000574799 TNFRSF21O75509 655 aa9.48□□□□□ -0.89
CCDC40-212ENST00000574799 DARSP14868 501 aaKnown RBP9.48□□□□□ -0.89
CCDC40-212ENST00000574799 AKAP5P24588 427 aa9.48□□□□□ -0.89
CCDC40-212ENST00000574799 MAP3K7CLP57077 242 aa9.48□□□□□ -0.89
CCDC40-212ENST00000574799 TMEM132DQ14C87 1099 aa9.48□□□□□ -0.89
CCDC40-212ENST00000574799 PFKFB4Q16877 469 aa9.48□□□□□ -0.89
CCDC40-212ENST00000574799 ADPRMQ3LIE5 342 aa9.48□□□□□ -0.89
CCDC40-212ENST00000574799 TBRG1Q3YBR2 411 aa9.48□□□□□ -0.89
CCDC40-212ENST00000574799 ARMCX4Q5H9R4 360 aa9.48□□□□□ -0.89
CCDC40-212ENST00000574799 SIGIRRQ6IA17 410 aa9.48□□□□□ -0.89
CCDC40-212ENST00000574799 LCLAT1Q6UWP7 414 aa9.48□□□□□ -0.89
CCDC40-212ENST00000574799 RAB43Q86YS6 212 aa9.48□□□□□ -0.89
CCDC40-212ENST00000574799 SPNS2Q8IVW8 549 aa9.48□□□□□ -0.89
CCDC40-212ENST00000574799 FAM126BQ8IXS8 530 aa9.48□□□□□ -0.89
CCDC40-212ENST00000574799 CELF2-AS1Q8N7Q2 184 aa9.48□□□□□ -0.89
CCDC40-212ENST00000574799 SETD9Q8NE22 299 aa9.48□□□□□ -0.89
CCDC40-212ENST00000574799 TSPAN17Q96FV3 270 aa9.48□□□□□ -0.89
CCDC40-212ENST00000574799 MED30Q96HR3 178 aa9.48□□□□□ -0.89
CCDC40-212ENST00000574799 EMILIN2Q9BXX0 1053 aa9.48□□□□□ -0.89
CCDC40-212ENST00000574799 EIF2B3Q9NR50 452 aaKnown RBP9.48□□□□□ -0.89
CCDC40-212ENST00000574799 AASDHPPTQ9NRN7 309 aa9.48□□□□□ -0.89
CCDC40-212ENST00000574799 C14orf119Q9NWQ9 140 aa9.48□□□□□ -0.89
CCDC40-212ENST00000574799 AASSQ9UDR5 926 aa9.48□□□□□ -0.89
CCDC40-212ENST00000574799 FBXO5Q9UKT4 447 aa9.48□□□□□ -0.89
CCDC40-212ENST00000574799 KLHL20Q9Y2M5 609 aa9.48□□□□□ -0.89
CCDC40-212ENST00000574799 ERI2A8K979 691 aaKnown RBP9.47□□□□□ -0.89
CCDC40-212ENST00000574799 SUPT3HB4E1H0 165 aa9.47□□□□□ -0.89
CCDC40-212ENST00000574799 SLC1A7O00341 560 aa9.47□□□□□ -0.89
CCDC40-212ENST00000574799 PTGESO14684 152 aa9.47□□□□□ -0.89
CCDC40-212ENST00000574799 HOXC11O43248 304 aaPredicted RBP9.47□□□□□ -0.89
CCDC40-212ENST00000574799 KPNA6O60684 536 aa9.47□□□□□ -0.89
CCDC40-212ENST00000574799 SEMA3DO95025 777 aa9.47□□□□□ -0.89
CCDC40-212ENST00000574799 ANXA6P08133 673 aa9.47□□□□□ -0.89
CCDC40-212ENST00000574799 LTA4HP09960 611 aaKnown RBP9.47□□□□□ -0.89
CCDC40-212ENST00000574799 JUNBP17275 347 aaPredicted RBP9.47□□□□□ -0.89
CCDC40-212ENST00000574799 PTGS2P35354 604 aa9.47□□□□□ -0.89
CCDC40-212ENST00000574799 SOX6P35712 828 aa9.47□□□□□ -0.89
CCDC40-212ENST00000574799 HTR2BP41595 481 aa9.47□□□□□ -0.89
CCDC40-212ENST00000574799 MTPNP58546 118 aa9.47□□□□□ -0.89
CCDC40-212ENST00000574799 CYP4F2P78329 520 aa9.47□□□□□ -0.89
CCDC40-212ENST00000574799 CYP4F3Q08477 520 aa9.47□□□□□ -0.89
CCDC40-212ENST00000574799 BST2Q10589 180 aaKnown RBP9.47□□□□□ -0.89
CCDC40-212ENST00000574799 MAP2K5Q13163 448 aa9.47□□□□□ -0.89
CCDC40-212ENST00000574799 TAB1Q15750 504 aa9.47□□□□□ -0.89
CCDC40-212ENST00000574799 CATSPEREQ5SY80 951 aa9.47□□□□□ -0.89
CCDC40-212ENST00000574799 CEP97Q8IW35 865 aa9.47□□□□□ -0.89
CCDC40-212ENST00000574799 CENPLQ8N0S6 344 aaPredicted RBP9.47□□□□□ -0.89
CCDC40-212ENST00000574799 PTGR2Q8N8N7 351 aaPredicted RBP9.47□□□□□ -0.89
CCDC40-212ENST00000574799 SPERTQ8NA61 448 aa9.47□□□□□ -0.89
CCDC40-212ENST00000574799 FAM83FQ8NEG4 500 aaPredicted RBP9.47□□□□□ -0.89
CCDC40-212ENST00000574799 TWIST2Q8WVJ9 160 aa9.47□□□□□ -0.89
CCDC40-212ENST00000574799 FICDQ9BVA6 458 aa9.47□□□□□ -0.89
CCDC40-212ENST00000574799 LEF1Q9UJU2 399 aaPredicted RBP9.47□□□□□ -0.89
CCDC40-212ENST00000574799 STAP1Q9ULZ2 295 aa9.47□□□□□ -0.89
CCDC40-212ENST00000574799 GMPPBQ9Y5P6 360 aa9.47□□□□□ -0.89
CCDC40-212ENST00000574799 A0A087X1B8 175 aa9.47□□□□□ -0.89
CCDC40-212ENST00000574799 LOC100130705A0A1B0GUX0 176 aa9.47□□□□□ -0.89
CCDC40-212ENST00000574799 SMIM35A0A1B0GVV1 85 aa9.47□□□□□ -0.89
CCDC40-212ENST00000574799 NCF1BA6NI72 391 aaPredicted RBP9.47□□□□□ -0.89
CCDC40-212ENST00000574799 C12orf71A8MTZ7 269 aa9.47□□□□□ -0.89
CCDC40-212ENST00000574799 NCF1CA8MVU1 366 aaPredicted RBP9.47□□□□□ -0.89
CCDC40-212ENST00000574799 RGS10O43665 173 aa9.47□□□□□ -0.89
CCDC40-212ENST00000574799 CAPNS1P04632 268 aa9.47□□□□□ -0.89
CCDC40-212ENST00000574799 NCF1P14598 390 aaPredicted RBP9.47□□□□□ -0.89
CCDC40-212ENST00000574799 PRKCAP17252 672 aa9.47□□□□□ -0.89
CCDC40-212ENST00000574799 PURAQ00577 322 aaKnown RBP9.47□□□□□ -0.89
CCDC40-212ENST00000574799 CD83Q01151 205 aa9.47□□□□□ -0.89
CCDC40-212ENST00000574799 DPYSL2Q16555 572 aa9.47□□□□□ -0.89
CCDC40-212ENST00000574799 FSCN1Q16658 493 aaKnown RBP9.47□□□□□ -0.89
CCDC40-212ENST00000574799 CYP20A1Q6UW02 462 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms