RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 ADAMTS6Q9UKP5 1117 aa13.86□□□□□ -0.19
VPS33B-208ENST00000574755 LRCH1Q9Y2L9 728 aa13.86□□□□□ -0.19
VPS33B-208ENST00000574755 HCFC2Q9Y5Z7 792 aa13.86□□□□□ -0.19
VPS33B-208ENST00000574755 AGAP14A8MT82 685 aa13.85□□□□□ -0.19
VPS33B-208ENST00000574755 TRIM38O00635 465 aa13.85□□□□□ -0.19
VPS33B-208ENST00000574755 HOXA9P31269 272 aa13.85□□□□□ -0.19
VPS33B-208ENST00000574755 CDC16Q13042 620 aa13.85□□□□□ -0.19
VPS33B-208ENST00000574755 CBX2Q14781 532 aaPredicted RBP13.85□□□□□ -0.19
VPS33B-208ENST00000574755 ATP13A5Q4VNC0 1218 aa13.85□□□□□ -0.19
VPS33B-208ENST00000574755 SCIMPQ6UWF3 145 aa13.85□□□□□ -0.19
VPS33B-208ENST00000574755 ADGRG2Q8IZP9 1017 aa13.85□□□□□ -0.19
VPS33B-208ENST00000574755 LEMD2Q8NC56 503 aa13.85□□□□□ -0.19
VPS33B-208ENST00000574755 ING5Q8WYH8 240 aa13.85□□□□□ -0.19
VPS33B-208ENST00000574755 KLHL32Q96NJ5 620 aa13.85□□□□□ -0.19
VPS33B-208ENST00000574755 ACOX2Q99424 681 aa13.85□□□□□ -0.19
VPS33B-208ENST00000574755 NSUN3Q9H649 340 aaKnown RBP13.85□□□□□ -0.19
VPS33B-208ENST00000574755 PFDN4Q9NQP4 134 aa13.85□□□□□ -0.19
VPS33B-208ENST00000574755 SPATS2LQ9NUQ6 558 aaKnown RBP13.85□□□□□ -0.19
VPS33B-208ENST00000574755 PLXNB3Q9ULL4 1909 aa13.85□□□□□ -0.19
VPS33B-208ENST00000574755 H3BNX3 289 aa13.85□□□□□ -0.19
VPS33B-208ENST00000574755 TRIM24O15164 1050 aa13.85□□□□□ -0.19
VPS33B-208ENST00000574755 IDO1P14902 403 aa13.85□□□□□ -0.19
VPS33B-208ENST00000574755 POLR2EP19388 210 aaKnown RBP13.85□□□□□ -0.19
VPS33B-208ENST00000574755 POLR2LP62875 67 aaKnown RBP13.85□□□□□ -0.19
VPS33B-208ENST00000574755 MRPS22P82650 360 aaKnown RBP13.85□□□□□ -0.19
VPS33B-208ENST00000574755 PCBP2Q15366 365 aaKnown RBP eCLIP13.85□□□□□ -0.19
VPS33B-208ENST00000574755 GSTA3Q16772 222 aa13.85□□□□□ -0.19
VPS33B-208ENST00000574755 GPRC6AQ5T6X5 926 aa13.85□□□□□ -0.19
VPS33B-208ENST00000574755 GDPD4Q6W3E5 623 aa13.85□□□□□ -0.19
VPS33B-208ENST00000574755 RFLNAQ6ZTI6 216 aa13.85□□□□□ -0.19
VPS33B-208ENST00000574755 PCYOX1LQ8NBM8 494 aa13.85□□□□□ -0.19
VPS33B-208ENST00000574755 PDPRQ8NCN5 879 aa13.85□□□□□ -0.19
VPS33B-208ENST00000574755 OR2A12Q8NGT7 310 aa13.85□□□□□ -0.19
VPS33B-208ENST00000574755 GDPD5Q8WTR4 605 aa13.85□□□□□ -0.19
VPS33B-208ENST00000574755 COPS8Q99627 209 aa13.85□□□□□ -0.19
VPS33B-208ENST00000574755 EGFL8Q99944 293 aa13.85□□□□□ -0.19
VPS33B-208ENST00000574755 MRPL40Q9NQ50 206 aaKnown RBP13.85□□□□□ -0.19
VPS33B-208ENST00000574755 SDR39U1Q9NRG7 319 aaPredicted RBP13.85□□□□□ -0.19
VPS33B-208ENST00000574755 LATS2Q9NRM7 1088 aa13.85□□□□□ -0.19
VPS33B-208ENST00000574755 ZDHHC3Q9NYG2 299 aa13.85□□□□□ -0.19
VPS33B-208ENST00000574755 B4GALT6Q9UBX8 382 aa13.85□□□□□ -0.19
VPS33B-208ENST00000574755 SARDHQ9UL12 918 aa13.85□□□□□ -0.19
VPS33B-208ENST00000574755 OARD1Q9Y530 152 aa13.85□□□□□ -0.19
VPS33B-208ENST00000574755 LINC01553A4QN01 128 aa13.84□□□□□ -0.19
VPS33B-208ENST00000574755 BBIP1A8MTZ0 92 aa13.84□□□□□ -0.19
VPS33B-208ENST00000574755 WEE1P30291 646 aa13.84□□□□□ -0.19
VPS33B-208ENST00000574755 DIO3P55073 304 aa13.84□□□□□ -0.19
VPS33B-208ENST00000574755 ERVPABLB-1P60509 514 aa13.84□□□□□ -0.19
VPS33B-208ENST00000574755 GTF2H2Q13888 395 aa13.84□□□□□ -0.19
VPS33B-208ENST00000574755 DMC1Q14565 340 aa13.84□□□□□ -0.19
VPS33B-208ENST00000574755 TTLL9Q3SXZ7 439 aa13.84□□□□□ -0.19
VPS33B-208ENST00000574755 XKR7Q5GH72 579 aa13.84□□□□□ -0.19
VPS33B-208ENST00000574755 PRSS36Q5K4E3 855 aa13.84□□□□□ -0.19
VPS33B-208ENST00000574755 LPCAT4Q643R3 524 aa13.84□□□□□ -0.19
VPS33B-208ENST00000574755 TMEM215Q68D42 235 aa13.84□□□□□ -0.19
VPS33B-208ENST00000574755 OGFOD2Q6N063 350 aa13.84□□□□□ -0.19
VPS33B-208ENST00000574755 GTF2H2CQ6P1K8 395 aa13.84□□□□□ -0.19
VPS33B-208ENST00000574755 LETMD1Q6P1Q0 360 aa13.84□□□□□ -0.19
VPS33B-208ENST00000574755 GOLGA7Q7Z5G4 137 aa13.84□□□□□ -0.19
VPS33B-208ENST00000574755 AHI1Q8N157 1196 aa13.84□□□□□ -0.19
VPS33B-208ENST00000574755 ATP6V1E2Q96A05 226 aa13.84□□□□□ -0.19
VPS33B-208ENST00000574755 ASB9Q96DX5 294 aa13.84□□□□□ -0.19
VPS33B-208ENST00000574755 CROTQ9UKG9 612 aa13.84□□□□□ -0.19
VPS33B-208ENST00000574755 A0A1W2PQ67 120 aa13.83□□□□□ -0.19
VPS33B-208ENST00000574755 EIF4E1BA6NMX2 242 aaKnown RBP13.83□□□□□ -0.19
VPS33B-208ENST00000574755 C9JVG2 144 aa13.83□□□□□ -0.19
VPS33B-208ENST00000574755 PER2O15055 1255 aa13.83□□□□□ -0.19
VPS33B-208ENST00000574755 ANGPT2O15123 496 aa13.83□□□□□ -0.19
VPS33B-208ENST00000574755 BCAS2O75934 225 aaPredicted RBP13.83□□□□□ -0.19
VPS33B-208ENST00000574755 MATN4O95460 622 aa13.83□□□□□ -0.19
VPS33B-208ENST00000574755 HNRNPA1P09651 372 aaKnown RBP eCLIP13.83□□□□□ -0.19
VPS33B-208ENST00000574755 C1SP09871 688 aa13.83□□□□□ -0.19
VPS33B-208ENST00000574755 PRR35P0CG20 571 aa13.83□□□□□ -0.19
VPS33B-208ENST00000574755 HSPA7P48741 367 aa13.83□□□□□ -0.19
VPS33B-208ENST00000574755 UBE3AQ05086 875 aa13.83□□□□□ -0.19
VPS33B-208ENST00000574755 ARHGEF7Q14155 803 aa13.83□□□□□ -0.19
VPS33B-208ENST00000574755 TRIP10Q15642 601 aa13.83□□□□□ -0.19
VPS33B-208ENST00000574755 VPS26BQ4G0F5 336 aa13.83□□□□□ -0.19
VPS33B-208ENST00000574755 ZDHHC20Q5W0Z9 365 aa13.83□□□□□ -0.19
VPS33B-208ENST00000574755 SPATA19Q7Z5L4 167 aa13.83□□□□□ -0.19
VPS33B-208ENST00000574755 CYB5D2Q8WUJ1 264 aa13.83□□□□□ -0.19
VPS33B-208ENST00000574755 SORCS1Q8WY21 1168 aa13.83□□□□□ -0.19
VPS33B-208ENST00000574755 ROPN1LQ96C74 230 aa13.83□□□□□ -0.19
VPS33B-208ENST00000574755 ECSITQ9BQ95 431 aa13.83□□□□□ -0.19
VPS33B-208ENST00000574755 SLC39A3Q9BRY0 314 aa13.83□□□□□ -0.19
VPS33B-208ENST00000574755 VCX3BQ9H321 246 aa13.83□□□□□ -0.19
VPS33B-208ENST00000574755 BATF3Q9NR55 127 aa13.83□□□□□ -0.19
VPS33B-208ENST00000574755 RIC8BQ9NVN3 520 aa13.83□□□□□ -0.19
VPS33B-208ENST00000574755 EPS15L1Q9UBC2 864 aa13.83□□□□□ -0.19
VPS33B-208ENST00000574755 CD84Q9UIB8 345 aa13.83□□□□□ -0.19
VPS33B-208ENST00000574755 ERVW-1Q9UQF0 538 aa13.83□□□□□ -0.19
VPS33B-208ENST00000574755 RWDD3Q9Y3V2 267 aa13.83□□□□□ -0.19
VPS33B-208ENST00000574755 SOBPA7XYQ1 873 aa13.83□□□□□ -0.2
VPS33B-208ENST00000574755 ACOT8O14734 319 aa13.83□□□□□ -0.2
VPS33B-208ENST00000574755 CAPN1P07384 714 aa13.83□□□□□ -0.2
VPS33B-208ENST00000574755 VCLP18206 1134 aa13.83□□□□□ -0.2
VPS33B-208ENST00000574755 NNMTP40261 264 aa13.83□□□□□ -0.2
VPS33B-208ENST00000574755 PSMD8P48556 350 aa13.83□□□□□ -0.2
VPS33B-208ENST00000574755 SPINT3P49223 89 aa13.83□□□□□ -0.2
VPS33B-208ENST00000574755 RALGDSQ12967 914 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms