RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 BRSK1Q8TDC3 778 aa17.76■□□□□ 0.43
CHD3-214ENST00000572579 RBM41Q96IZ5 413 aaKnown RBP17.76■□□□□ 0.43
CHD3-214ENST00000572579 SLC45A3Q96JT2 553 aa17.76■□□□□ 0.43
CHD3-214ENST00000572579 ZNF768Q9H5H4 540 aaKnown RBP17.76■□□□□ 0.43
CHD3-214ENST00000572579 POT1Q9NUX5 634 aa17.76■□□□□ 0.43
CHD3-214ENST00000572579 GEMIN8Q9NWZ8 242 aaKnown RBP17.76■□□□□ 0.43
CHD3-214ENST00000572579 HACD3Q9P035 362 aa17.76■□□□□ 0.43
CHD3-214ENST00000572579 TERTO14746 1132 aaKnown RBP17.75■□□□□ 0.43
CHD3-214ENST00000572579 SLC28A2O43868 658 aa17.75■□□□□ 0.43
CHD3-214ENST00000572579 NDUFA10O95299 355 aa17.75■□□□□ 0.43
CHD3-214ENST00000572579 AMD1P17707 334 aa17.75■□□□□ 0.43
CHD3-214ENST00000572579 MAP4P27816 1152 aaKnown RBP17.75■□□□□ 0.43
CHD3-214ENST00000572579 PSMB4P28070 264 aa17.75■□□□□ 0.43
CHD3-214ENST00000572579 CAPZBP47756 277 aa17.75■□□□□ 0.43
CHD3-214ENST00000572579 SPA17Q15506 151 aa17.75■□□□□ 0.43
CHD3-214ENST00000572579 ANKRD20A2Q5SQ80 823 aa17.75■□□□□ 0.43
CHD3-214ENST00000572579 ANKRD20A1Q5TYW2 823 aa17.75■□□□□ 0.43
CHD3-214ENST00000572579 ANKRD20A3Q5VUR7 823 aa17.75■□□□□ 0.43
CHD3-214ENST00000572579 CERS6Q6ZMG9 384 aa17.75■□□□□ 0.43
CHD3-214ENST00000572579 FAM92BQ6ZTR7 304 aa17.75■□□□□ 0.43
CHD3-214ENST00000572579 AMZ2Q86W34 360 aa17.75■□□□□ 0.43
CHD3-214ENST00000572579 TRIM48Q8IWZ4 208 aa17.75■□□□□ 0.43
CHD3-214ENST00000572579 OR4K2Q8NGD2 314 aa17.75■□□□□ 0.43
CHD3-214ENST00000572579 ZNF398Q8TD17 642 aa17.75■□□□□ 0.43
CHD3-214ENST00000572579 KLHL6Q8WZ60 621 aa17.75■□□□□ 0.43
CHD3-214ENST00000572579 PANX2Q96RD6 677 aa17.75■□□□□ 0.43
CHD3-214ENST00000572579 ARHGAP9Q9BRR9 750 aa17.75■□□□□ 0.43
CHD3-214ENST00000572579 ZPBPQ9BS86 351 aa17.75■□□□□ 0.43
CHD3-214ENST00000572579 OSBPL8Q9BZF1 889 aa17.75■□□□□ 0.43
CHD3-214ENST00000572579 SMOXQ9NWM0 555 aa17.75■□□□□ 0.43
CHD3-214ENST00000572579 SEMA5BQ9P283 1151 aa17.75■□□□□ 0.43
CHD3-214ENST00000572579 EPHA6Q9UF33 1036 aa17.75■□□□□ 0.43
CHD3-214ENST00000572579 PSMD13Q9UNM6 376 aa17.75■□□□□ 0.43
CHD3-214ENST00000572579 EFR3BQ9Y2G0 817 aa17.75■□□□□ 0.43
CHD3-214ENST00000572579 MRPS18BQ9Y676 258 aaKnown RBP17.75■□□□□ 0.43
CHD3-214ENST00000572579 GRID2IPA4D2P6 1211 aa17.74■□□□□ 0.43
CHD3-214ENST00000572579 PJA2O43164 708 aa17.74■□□□□ 0.43
CHD3-214ENST00000572579 SUV39H1O43463 412 aa17.74■□□□□ 0.43
CHD3-214ENST00000572579 TIAF1O95411 115 aa17.74■□□□□ 0.43
CHD3-214ENST00000572579 OAS2P29728 719 aaKnown RBP17.74■□□□□ 0.43
CHD3-214ENST00000572579 COPS2P61201 443 aa17.74■□□□□ 0.43
CHD3-214ENST00000572579 SPARCL1Q14515 664 aa17.74■□□□□ 0.43
CHD3-214ENST00000572579 LDLRAP1Q5SW96 308 aa17.74■□□□□ 0.43
CHD3-214ENST00000572579 METRNLQ641Q3 311 aa17.74■□□□□ 0.43
CHD3-214ENST00000572579 DET1Q7L5Y6 550 aa17.74■□□□□ 0.43
CHD3-214ENST00000572579 PRSS42Q7Z5A4 293 aa17.74■□□□□ 0.43
CHD3-214ENST00000572579 LILRA3Q8N6C8 439 aaPredicted RBP17.74■□□□□ 0.43
CHD3-214ENST00000572579 ACRBPQ8NEB7 543 aa17.74■□□□□ 0.43
CHD3-214ENST00000572579 SPDYE1Q8NFV5 336 aaPredicted RBP17.74■□□□□ 0.43
CHD3-214ENST00000572579 CCDC110Q8TBZ0 833 aa17.74■□□□□ 0.43
CHD3-214ENST00000572579 CXorf40BQ96DE9 158 aa17.74■□□□□ 0.43
CHD3-214ENST00000572579 ELMO2Q96JJ3 720 aa17.74■□□□□ 0.43
CHD3-214ENST00000572579 INSM2Q96T92 566 aaPredicted RBP17.74■□□□□ 0.43
CHD3-214ENST00000572579 TRIM4Q9C037 500 aa17.74■□□□□ 0.43
CHD3-214ENST00000572579 FKBPLQ9UIM3 349 aa17.74■□□□□ 0.43
CHD3-214ENST00000572579 CFAP20Q9Y6A4 193 aaKnown RBP17.74■□□□□ 0.43
CHD3-214ENST00000572579 SPENQ96T58 3664 aaKnown RBP17.74■□□□□ 0.43
CHD3-214ENST00000572579 IGHV5-51A0A0C4DH38 117 aa17.73■□□□□ 0.43
CHD3-214ENST00000572579 STX7O15400 261 aaKnown RBP17.73■□□□□ 0.43
CHD3-214ENST00000572579 TOX3O15405 576 aaPredicted RBP17.73■□□□□ 0.43
CHD3-214ENST00000572579 PRKAR1AP10644 381 aa17.73■□□□□ 0.43
CHD3-214ENST00000572579 FOLR1P15328 257 aa17.73■□□□□ 0.43
CHD3-214ENST00000572579 CTNNA2P26232 953 aa17.73■□□□□ 0.43
CHD3-214ENST00000572579 PTPN7P35236 360 aa17.73■□□□□ 0.43
CHD3-214ENST00000572579 STAT5AP42229 794 aa17.73■□□□□ 0.43
CHD3-214ENST00000572579 FOXM1Q08050 763 aa17.73■□□□□ 0.43
CHD3-214ENST00000572579 ABHD18Q0P651 414 aa17.73■□□□□ 0.43
CHD3-214ENST00000572579 TAF1AQ15573 450 aaPredicted RBP17.73■□□□□ 0.43
CHD3-214ENST00000572579 FNBP1LQ5T0N5 605 aa17.73■□□□□ 0.43
CHD3-214ENST00000572579 ZDHHC20Q5W0Z9 365 aa17.73■□□□□ 0.43
CHD3-214ENST00000572579 BORAQ6PGQ7 559 aa17.73■□□□□ 0.43
CHD3-214ENST00000572579 PRICKLE2Q7Z3G6 844 aa17.73■□□□□ 0.43
CHD3-214ENST00000572579 GAS2L3Q86XJ1 694 aa17.73■□□□□ 0.43
CHD3-214ENST00000572579 KLHDC8BQ8IXV7 354 aa17.73■□□□□ 0.43
CHD3-214ENST00000572579 OR13C4Q8NGS5 318 aa17.73■□□□□ 0.43
CHD3-214ENST00000572579 OR6C1Q96RD1 312 aa17.73■□□□□ 0.43
CHD3-214ENST00000572579 NRTNQ99748 197 aa17.73■□□□□ 0.43
CHD3-214ENST00000572579 RAB33BQ9H082 229 aa17.73■□□□□ 0.43
CHD3-214ENST00000572579 AKIRIN1Q9H9L7 192 aaPredicted RBP17.73■□□□□ 0.43
CHD3-214ENST00000572579 GPN2Q9H9Y4 310 aaPredicted RBP17.73■□□□□ 0.43
CHD3-214ENST00000572579 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.73■□□□□ 0.43
CHD3-214ENST00000572579 PKP3Q9Y446 797 aa17.73■□□□□ 0.43
CHD3-214ENST00000572579 DNMT3AQ9Y6K1 912 aaPredicted RBP17.73■□□□□ 0.43
CHD3-214ENST00000572579 RELNP78509 3460 aa17.73■□□□□ 0.43
CHD3-214ENST00000572579 MYO18BQ8IUG5 2567 aa17.72■□□□□ 0.43
CHD3-214ENST00000572579 ZNF891A8MT65 544 aaPredicted RBP17.72■□□□□ 0.43
CHD3-214ENST00000572579 AGAP14A8MT82 685 aa17.72■□□□□ 0.43
CHD3-214ENST00000572579 BTNL10A8MVZ5 291 aa17.72■□□□□ 0.43
CHD3-214ENST00000572579 CCL22O00626 93 aa17.72■□□□□ 0.43
CHD3-214ENST00000572579 KCNJ13O60928 360 aa17.72■□□□□ 0.43
CHD3-214ENST00000572579 SRP72O76094 671 aaKnown RBP17.72■□□□□ 0.43
CHD3-214ENST00000572579 PRAMEF1O95521 474 aa17.72■□□□□ 0.43
CHD3-214ENST00000572579 RBP3P10745 1247 aa17.72■□□□□ 0.43
CHD3-214ENST00000572579 FGF5P12034 268 aa17.72■□□□□ 0.43
CHD3-214ENST00000572579 NELFEP18615 380 aaKnown RBP17.72■□□□□ 0.43
CHD3-214ENST00000572579 LPOP22079 712 aaPredicted RBP17.72■□□□□ 0.43
CHD3-214ENST00000572579 PBLDP30039 288 aaPredicted RBP17.72■□□□□ 0.43
CHD3-214ENST00000572579 CYLC1P35663 651 aaPredicted RBP17.72■□□□□ 0.43
CHD3-214ENST00000572579 GEMP55040 296 aa17.72■□□□□ 0.43
CHD3-214ENST00000572579 POLE2P56282 527 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms