RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 KDM4EB2RXH2 506 aaPredicted RBP4.11□□□□□ -1.75
NUP88-202ENST00000570937 FAM86B1E9PN63 330 aa4.11□□□□□ -1.75
NUP88-202ENST00000570937 M0QZ92 97 aa4.11□□□□□ -1.75
NUP88-202ENST00000570937 HAS3O00219 553 aa4.11□□□□□ -1.75
NUP88-202ENST00000570937 PER2O15055 1255 aa4.11□□□□□ -1.75
NUP88-202ENST00000570937 ATP9AO75110 1047 aa4.11□□□□□ -1.75
NUP88-202ENST00000570937 PPP1R3DO95685 299 aa4.11□□□□□ -1.75
NUP88-202ENST00000570937 MMP1P03956 469 aa4.11□□□□□ -1.75
NUP88-202ENST00000570937 FAM86B2P0C5J1 330 aa4.11□□□□□ -1.75
NUP88-202ENST00000570937 ZNF286BP0CG31 522 aa4.11□□□□□ -1.75
NUP88-202ENST00000570937 SMIM10L2AP0DMW4 78 aa4.11□□□□□ -1.75
NUP88-202ENST00000570937 SMIM10L2BP0DMW5 78 aa4.11□□□□□ -1.75
NUP88-202ENST00000570937 RYKP34925 604 aa4.11□□□□□ -1.75
NUP88-202ENST00000570937 MXI1P50539 228 aa4.11□□□□□ -1.75
NUP88-202ENST00000570937 ART1P52961 327 aa4.11□□□□□ -1.75
NUP88-202ENST00000570937 UBE3AQ05086 875 aa4.11□□□□□ -1.75
NUP88-202ENST00000570937 NFATC4Q14934 902 aa4.11□□□□□ -1.75
NUP88-202ENST00000570937 PLCB4Q15147 1175 aa4.11□□□□□ -1.75
NUP88-202ENST00000570937 LETM2Q2VYF4 491 aa4.11□□□□□ -1.75
NUP88-202ENST00000570937 LRIT3Q3SXY7 679 aa4.11□□□□□ -1.75
NUP88-202ENST00000570937 SERINC5Q86VE9 423 aa4.11□□□□□ -1.75
NUP88-202ENST00000570937 MON1AQ86VX9 555 aa4.11□□□□□ -1.75
NUP88-202ENST00000570937 CPOQ8IVL8 374 aa4.11□□□□□ -1.75
NUP88-202ENST00000570937 EXOC8Q8IYI6 725 aa4.11□□□□□ -1.75
NUP88-202ENST00000570937 DCP1BQ8IZD4 617 aaKnown RBP4.11□□□□□ -1.75
NUP88-202ENST00000570937 NME8Q8N427 588 aa4.11□□□□□ -1.75
NUP88-202ENST00000570937 RDM1Q8NG50 284 aa4.11□□□□□ -1.75
NUP88-202ENST00000570937 RFWD2Q8NHY2 731 aa4.11□□□□□ -1.75
NUP88-202ENST00000570937 CRYGNQ8WXF5 182 aa4.11□□□□□ -1.75
NUP88-202ENST00000570937 C8orf76Q96K31 380 aa4.11□□□□□ -1.75
NUP88-202ENST00000570937 FAM20AQ96MK3 541 aa4.11□□□□□ -1.75
NUP88-202ENST00000570937 YME1L1Q96TA2 773 aa4.11□□□□□ -1.75
NUP88-202ENST00000570937 C16orf70Q9BSU1 422 aa4.11□□□□□ -1.75
NUP88-202ENST00000570937 PHF7Q9BWX1 381 aaPredicted RBP4.11□□□□□ -1.75
NUP88-202ENST00000570937 TEKT3Q9BXF9 490 aa4.11□□□□□ -1.75
NUP88-202ENST00000570937 FTOQ9C0B1 505 aaKnown RBP eCLIP4.11□□□□□ -1.75
NUP88-202ENST00000570937 PRO3102Q9H379 93 aa4.11□□□□□ -1.75
NUP88-202ENST00000570937 C6orf106Q9H6K1 298 aaPredicted RBP4.11□□□□□ -1.75
NUP88-202ENST00000570937 ZNF302Q9NR11 478 aa4.11□□□□□ -1.75
NUP88-202ENST00000570937 ALKBH4Q9NXW9 302 aa4.11□□□□□ -1.75
NUP88-202ENST00000570937 DDX25Q9UHL0 483 aaKnown RBP4.11□□□□□ -1.75
NUP88-202ENST00000570937 NOL7Q9UMY1 257 aaKnown RBP4.11□□□□□ -1.75
NUP88-202ENST00000570937 KCNJ14Q9UNX9 436 aa4.11□□□□□ -1.75
NUP88-202ENST00000570937 NOTCH4Q99466 2003 aa4.11□□□□□ -1.75
NUP88-202ENST00000570937 BAZ2BQ9UIF8 2168 aaKnown RBP4.1□□□□□ -1.75
NUP88-202ENST00000570937 IGLV3-22A0A075B6J6 115 aa4.1□□□□□ -1.75
NUP88-202ENST00000570937 IGLV5-52A0A0A0MRZ9 124 aa4.1□□□□□ -1.75
NUP88-202ENST00000570937 GOLGA6L10A0A0M3HER8 536 aa4.1□□□□□ -1.75
NUP88-202ENST00000570937 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.1□□□□□ -1.75
NUP88-202ENST00000570937 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.1□□□□□ -1.75
NUP88-202ENST00000570937 ARHGAP10A1A4S6 786 aa4.1□□□□□ -1.75
NUP88-202ENST00000570937 RSPH10B2B2RC85 870 aa4.1□□□□□ -1.75
NUP88-202ENST00000570937 H3BQV1 296 aa4.1□□□□□ -1.75
NUP88-202ENST00000570937 DDX39AO00148 427 aaKnown RBP4.1□□□□□ -1.75
NUP88-202ENST00000570937 CEP104O60308 925 aa4.1□□□□□ -1.75
NUP88-202ENST00000570937 NEMFO60524 1076 aa4.1□□□□□ -1.75
NUP88-202ENST00000570937 KCNJ13O60928 360 aa4.1□□□□□ -1.75
NUP88-202ENST00000570937 BAIAP3O94812 1187 aa4.1□□□□□ -1.75
NUP88-202ENST00000570937 CTDNEP1O95476 244 aa4.1□□□□□ -1.75
NUP88-202ENST00000570937 IQCF3P0C7M6 154 aa4.1□□□□□ -1.75
NUP88-202ENST00000570937 RSPH10BP0C881 870 aa4.1□□□□□ -1.75
NUP88-202ENST00000570937 FDPSP14324 419 aaKnown RBP4.1□□□□□ -1.75
NUP88-202ENST00000570937 CSF2RAP15509 400 aa4.1□□□□□ -1.75
NUP88-202ENST00000570937 PTPN2P17706 415 aa4.1□□□□□ -1.75
NUP88-202ENST00000570937 TMOD1P28289 359 aa4.1□□□□□ -1.75
NUP88-202ENST00000570937 GPD2P43304 727 aa4.1□□□□□ -1.75
NUP88-202ENST00000570937 CCR5P51681 352 aa4.1□□□□□ -1.75
NUP88-202ENST00000570937 CCL23P55773 120 aa4.1□□□□□ -1.75
NUP88-202ENST00000570937 BNC1Q01954 994 aa4.1□□□□□ -1.75
NUP88-202ENST00000570937 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.1□□□□□ -1.75
NUP88-202ENST00000570937 ITGB3BPQ13352 177 aaPredicted RBP4.1□□□□□ -1.75
NUP88-202ENST00000570937 ORC2Q13416 577 aaPredicted RBP4.1□□□□□ -1.75
NUP88-202ENST00000570937 CAPSQ13938 189 aa4.1□□□□□ -1.75
NUP88-202ENST00000570937 SHHQ15465 462 aa4.1□□□□□ -1.75
NUP88-202ENST00000570937 EDRF1Q3B7T1 1238 aa4.1□□□□□ -1.75
NUP88-202ENST00000570937 ATG16L1Q676U5 607 aa4.1□□□□□ -1.75
NUP88-202ENST00000570937 KRTAP5-11Q6L8G4 156 aa4.1□□□□□ -1.75
NUP88-202ENST00000570937 LRRC8DQ7L1W4 858 aa4.1□□□□□ -1.75
NUP88-202ENST00000570937 OTUD6AQ7L8S5 288 aa4.1□□□□□ -1.75
NUP88-202ENST00000570937 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.1□□□□□ -1.75
NUP88-202ENST00000570937 RPAINQ86UA6 219 aa4.1□□□□□ -1.75
NUP88-202ENST00000570937 FJX1Q86VR8 437 aa4.1□□□□□ -1.75
NUP88-202ENST00000570937 CCDC83Q8IWF9 413 aa4.1□□□□□ -1.75
NUP88-202ENST00000570937 SFTPA2Q8IWL1 248 aa4.1□□□□□ -1.75
NUP88-202ENST00000570937 DIS3L2Q8IYB7 885 aaKnown RBP4.1□□□□□ -1.75
NUP88-202ENST00000570937 SMRP1Q8NCR6 262 aa4.1□□□□□ -1.75
NUP88-202ENST00000570937 ATP8B4Q8TF62 1192 aa4.1□□□□□ -1.75
NUP88-202ENST00000570937 GDPD5Q8WTR4 605 aa4.1□□□□□ -1.75
NUP88-202ENST00000570937 STAMQ92783 540 aa4.1□□□□□ -1.75
NUP88-202ENST00000570937 APBB2Q92870 758 aa4.1□□□□□ -1.75
NUP88-202ENST00000570937 JPH2Q9BR39 696 aaPredicted RBP4.1□□□□□ -1.75
NUP88-202ENST00000570937 KRTAP2-2Q9BYT5 123 aa4.1□□□□□ -1.75
NUP88-202ENST00000570937 SETD4Q9NVD3 440 aa4.1□□□□□ -1.75
NUP88-202ENST00000570937 TMEM51Q9NW97 253 aa4.1□□□□□ -1.75
NUP88-202ENST00000570937 NDRG3Q9UGV2 375 aa4.1□□□□□ -1.75
NUP88-202ENST00000570937 TUBE1Q9UJT0 475 aa4.1□□□□□ -1.75
NUP88-202ENST00000570937 PROCRQ9UNN8 238 aa4.1□□□□□ -1.75
NUP88-202ENST00000570937 SMC3Q9UQE7 1217 aa4.1□□□□□ -1.75
NUP88-202ENST00000570937 MCM3APO60318 1980 aa4.1□□□□□ -1.75
NUP88-202ENST00000570937 FRMPD3Q5JV73 1810 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms