RNA–Protein interactions for RNA: ENST00000570659.5

SMG6-205, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-205ENST00000570659 JRKO75564 520 aa7.01□□□□□ -1.29
SMG6-205ENST00000570659 LSM8O95777 96 aaKnown RBP7.01□□□□□ -1.29
SMG6-205ENST00000570659 F10P00742 488 aa7.01□□□□□ -1.29
SMG6-205ENST00000570659 MMP2P08253 660 aa7.01□□□□□ -1.29
SMG6-205ENST00000570659 CYP2A6P11509 494 aaPredicted RBP7.01□□□□□ -1.29
SMG6-205ENST00000570659 KRT3P12035 628 aa7.01□□□□□ -1.29
SMG6-205ENST00000570659 ZNF7P17097 686 aaPredicted RBP7.01□□□□□ -1.29
SMG6-205ENST00000570659 FECHP22830 423 aa7.01□□□□□ -1.29
SMG6-205ENST00000570659 AMPD1P23109 780 aa7.01□□□□□ -1.29
SMG6-205ENST00000570659 IL1R2P27930 398 aa7.01□□□□□ -1.29
SMG6-205ENST00000570659 NOP2P46087 812 aaKnown RBP7.01□□□□□ -1.29
SMG6-205ENST00000570659 SPINT3P49223 89 aa7.01□□□□□ -1.29
SMG6-205ENST00000570659 LMAN1P49257 510 aa7.01□□□□□ -1.29
SMG6-205ENST00000570659 CLCNKAP51800 687 aa7.01□□□□□ -1.29
SMG6-205ENST00000570659 ZNF143P52747 638 aaPredicted RBP7.01□□□□□ -1.29
SMG6-205ENST00000570659 ART1P52961 327 aa7.01□□□□□ -1.29
SMG6-205ENST00000570659 CTSCP53634 463 aa7.01□□□□□ -1.29
SMG6-205ENST00000570659 TUBB4BP68371 445 aa7.01□□□□□ -1.29
SMG6-205ENST00000570659 TMPRSS15P98073 1019 aa7.01□□□□□ -1.29
SMG6-205ENST00000570659 PMP22Q01453 160 aa7.01□□□□□ -1.29
SMG6-205ENST00000570659 OTUD4Q01804 1114 aaKnown RBP7.01□□□□□ -1.29
SMG6-205ENST00000570659 TLE4Q04727 773 aa7.01□□□□□ -1.29
SMG6-205ENST00000570659 TUBB2AQ13885 445 aa7.01□□□□□ -1.29
SMG6-205ENST00000570659 GALNT3Q14435 633 aa7.01□□□□□ -1.29
SMG6-205ENST00000570659 RPE65Q16518 533 aa7.01□□□□□ -1.29
SMG6-205ENST00000570659 IGFL2Q6UWQ7 119 aa7.01□□□□□ -1.29
SMG6-205ENST00000570659 MON1BQ7L1V2 547 aa7.01□□□□□ -1.29
SMG6-205ENST00000570659 NLRP8Q86W28 1048 aa7.01□□□□□ -1.29
SMG6-205ENST00000570659 CPNE8Q86YQ8 564 aa7.01□□□□□ -1.29
SMG6-205ENST00000570659 LILRA3Q8N6C8 439 aaPredicted RBP7.01□□□□□ -1.29
SMG6-205ENST00000570659 AVL9Q8NBF6 648 aa7.01□□□□□ -1.29
SMG6-205ENST00000570659 ARRDC2Q8TBH0 407 aa7.01□□□□□ -1.29
SMG6-205ENST00000570659 ADAMTS18Q8TE60 1221 aa7.01□□□□□ -1.29
SMG6-205ENST00000570659 ZNF653Q96CK0 615 aa7.01□□□□□ -1.29
SMG6-205ENST00000570659 SGSM3Q96HU1 749 aa7.01□□□□□ -1.29
SMG6-205ENST00000570659 CNDP1Q96KN2 507 aa7.01□□□□□ -1.29
SMG6-205ENST00000570659 PCMTD1Q96MG8 357 aaPredicted RBP7.01□□□□□ -1.29
SMG6-205ENST00000570659 WDR77Q9BQA1 342 aaPredicted RBP7.01□□□□□ -1.29
SMG6-205ENST00000570659 TUBB2BQ9BVA1 445 aa7.01□□□□□ -1.29
SMG6-205ENST00000570659 RAB33BQ9H082 229 aa7.01□□□□□ -1.29
SMG6-205ENST00000570659 PDCL3Q9H2J4 239 aa7.01□□□□□ -1.29
SMG6-205ENST00000570659 LIME1Q9H400 295 aa7.01□□□□□ -1.29
SMG6-205ENST00000570659 EPB41L1Q9H4G0 881 aa7.01□□□□□ -1.29
SMG6-205ENST00000570659 DHX35Q9H5Z1 703 aaKnown RBP7.01□□□□□ -1.29
SMG6-205ENST00000570659 CATSPERBQ9H7T0 1116 aa7.01□□□□□ -1.29
SMG6-205ENST00000570659 FAM60AQ9NP50 221 aa7.01□□□□□ -1.29
SMG6-205ENST00000570659 SLC6A20Q9NP91 592 aa7.01□□□□□ -1.29
SMG6-205ENST00000570659 NT5MQ9NPB1 228 aa7.01□□□□□ -1.29
SMG6-205ENST00000570659 KCND1Q9NSA2 647 aa7.01□□□□□ -1.29
SMG6-205ENST00000570659 SAMSN1Q9NSI8 373 aaKnown RBP7.01□□□□□ -1.29
SMG6-205ENST00000570659 PCDHGB6Q9Y5F9 930 aa7.01□□□□□ -1.29
SMG6-205ENST00000570659 TRGV8A0A0C4DH27 118 aa7□□□□□ -1.29
SMG6-205ENST00000570659 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7□□□□□ -1.29
SMG6-205ENST00000570659 A0A1W2PQJ5 194 aa7□□□□□ -1.29
SMG6-205ENST00000570659 GTPBP10A4D1E9 387 aaKnown RBP7□□□□□ -1.29
SMG6-205ENST00000570659 OR5K3A6NET4 321 aa7□□□□□ -1.29
SMG6-205ENST00000570659 SIGLEC16A6NMB1 481 aa7□□□□□ -1.29
SMG6-205ENST00000570659 TMEM150CB9EJG8 249 aa7□□□□□ -1.29
SMG6-205ENST00000570659 BHMG1C9JSJ3 638 aaPredicted RBP7□□□□□ -1.29
SMG6-205ENST00000570659 CCL21O00585 134 aa7□□□□□ -1.29
SMG6-205ENST00000570659 FGF10O15520 208 aaPredicted RBP7□□□□□ -1.29
SMG6-205ENST00000570659 CELA2AP08217 269 aa7□□□□□ -1.29
SMG6-205ENST00000570659 UCHL3P15374 230 aa7□□□□□ -1.29
SMG6-205ENST00000570659 ST6GAL1P15907 406 aa7□□□□□ -1.29
SMG6-205ENST00000570659 TSFMP43897 325 aaKnown RBP7□□□□□ -1.29
SMG6-205ENST00000570659 GABRA4P48169 554 aa7□□□□□ -1.29
SMG6-205ENST00000570659 ST13P50502 369 aaKnown RBP7□□□□□ -1.29
SMG6-205ENST00000570659 PER3P56645 1201 aa7□□□□□ -1.29
SMG6-205ENST00000570659 HSD11B2P80365 405 aa7□□□□□ -1.29
SMG6-205ENST00000570659 CDR2Q01850 454 aa7□□□□□ -1.29
SMG6-205ENST00000570659 CDC16Q13042 620 aa7□□□□□ -1.29
SMG6-205ENST00000570659 ZIC1Q15915 447 aa7□□□□□ -1.29
SMG6-205ENST00000570659 C3AR1Q16581 482 aa7□□□□□ -1.29
SMG6-205ENST00000570659 QPCTQ16769 361 aa7□□□□□ -1.29
SMG6-205ENST00000570659 INSCQ1MX18 579 aa7□□□□□ -1.29
SMG6-205ENST00000570659 DEFB110Q30KQ9 67 aa7□□□□□ -1.29
SMG6-205ENST00000570659 LYPLAL1Q5VWZ2 237 aa7□□□□□ -1.29
SMG6-205ENST00000570659 CDHR3Q6ZTQ4 885 aa7□□□□□ -1.29
SMG6-205ENST00000570659 USP45Q70EL2 814 aa7□□□□□ -1.29
SMG6-205ENST00000570659 PHYKPLQ8IUZ5 450 aa7□□□□□ -1.29
SMG6-205ENST00000570659 TRIM48Q8IWZ4 208 aa7□□□□□ -1.29
SMG6-205ENST00000570659 FAM20CQ8IXL6 584 aa7□□□□□ -1.29
SMG6-205ENST00000570659 SHISA5Q8N114 240 aa7□□□□□ -1.29
SMG6-205ENST00000570659 BEND7Q8N7W2 519 aaPredicted RBP7□□□□□ -1.29
SMG6-205ENST00000570659 UBXN4Q92575 508 aa7□□□□□ -1.29
SMG6-205ENST00000570659 ZDHHC12Q96GR4 267 aa7□□□□□ -1.29
SMG6-205ENST00000570659 LRFN5Q96NI6 719 aa7□□□□□ -1.29
SMG6-205ENST00000570659 FCRL4Q96PJ5 515 aa7□□□□□ -1.29
SMG6-205ENST00000570659 TDRD1Q9BXT4 1180 aaKnown RBP7□□□□□ -1.29
SMG6-205ENST00000570659 SPRTNQ9H040 489 aaPredicted RBP7□□□□□ -1.29
SMG6-205ENST00000570659 CARD9Q9H257 536 aa7□□□□□ -1.29
SMG6-205ENST00000570659 PLA2G3Q9NZ20 509 aa7□□□□□ -1.29
SMG6-205ENST00000570659 TINAGQ9UJW2 476 aa7□□□□□ -1.29
SMG6-205ENST00000570659 BTRCQ9Y297 605 aa7□□□□□ -1.29
SMG6-205ENST00000570659 RPH3AQ9Y2J0 694 aaPredicted RBP7□□□□□ -1.29
SMG6-205ENST00000570659 PTRH2Q9Y3E5 179 aaKnown RBP7□□□□□ -1.29
SMG6-205ENST00000570659 JMJD1CQ15652 2540 aa7□□□□□ -1.29
SMG6-205ENST00000570659 RTTNQ86VV8 2226 aa7□□□□□ -1.29
SMG6-205ENST00000570659 C1orf232A0A0U1RR37 186 aa6.99□□□□□ -1.29
SMG6-205ENST00000570659 OR6C74A6NCV1 312 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms