RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 ASF1BQ9NVP2 202 aa11.55□□□□□ -0.56
GTF3C1-209ENST00000568569 TCFL5Q9UL49 500 aa11.55□□□□□ -0.56
GTF3C1-209ENST00000568569 WDR37Q9Y2I8 494 aa11.55□□□□□ -0.56
GTF3C1-209ENST00000568569 FBN2P35556 2912 aa11.55□□□□□ -0.56
GTF3C1-209ENST00000568569 POLEQ07864 2286 aa11.55□□□□□ -0.56
GTF3C1-209ENST00000568569 OTOGQ6ZRI0 2925 aa11.54□□□□□ -0.56
GTF3C1-209ENST00000568569 UBA6A0AVT1 1052 aaPredicted RBP11.54□□□□□ -0.56
GTF3C1-209ENST00000568569 ANKUB1A6NFN9 424 aa11.54□□□□□ -0.56
GTF3C1-209ENST00000568569 LRRC10BA6NIK2 292 aa11.54□□□□□ -0.56
GTF3C1-209ENST00000568569 MEN1O00255 615 aa11.54□□□□□ -0.56
GTF3C1-209ENST00000568569 MMP2P08253 660 aa11.54□□□□□ -0.56
GTF3C1-209ENST00000568569 CD48P09326 243 aa11.54□□□□□ -0.56
GTF3C1-209ENST00000568569 MX2P20592 715 aa11.54□□□□□ -0.56
GTF3C1-209ENST00000568569 GTF2H3Q13889 308 aa11.54□□□□□ -0.56
GTF3C1-209ENST00000568569 ELOAQ14241 798 aaKnown RBP11.54□□□□□ -0.56
GTF3C1-209ENST00000568569 GALNT3Q14435 633 aa11.54□□□□□ -0.56
GTF3C1-209ENST00000568569 ASIC2Q16515 512 aa11.54□□□□□ -0.56
GTF3C1-209ENST00000568569 KHDC1Q4VXA5 237 aaKnown RBP11.54□□□□□ -0.56
GTF3C1-209ENST00000568569 VWA5B1Q5TIE3 1220 aa11.54□□□□□ -0.56
GTF3C1-209ENST00000568569 CERS6Q6ZMG9 384 aa11.54□□□□□ -0.56
GTF3C1-209ENST00000568569 ZNF571Q7Z3V5 609 aaPredicted RBP11.54□□□□□ -0.56
GTF3C1-209ENST00000568569 C11orf96Q7Z7L8 435 aa11.54□□□□□ -0.56
GTF3C1-209ENST00000568569 SRRM1Q8IYB3 904 aaKnown RBP11.54□□□□□ -0.56
GTF3C1-209ENST00000568569 SLC34A3Q8N130 599 aa11.54□□□□□ -0.56
GTF3C1-209ENST00000568569 NIPA2Q8N8Q9 360 aa11.54□□□□□ -0.56
GTF3C1-209ENST00000568569 SLC38A9Q8NBW4 561 aa11.54□□□□□ -0.56
GTF3C1-209ENST00000568569 GPR150Q8NGU9 434 aa11.54□□□□□ -0.56
GTF3C1-209ENST00000568569 CPT1BQ92523 772 aa11.54□□□□□ -0.56
GTF3C1-209ENST00000568569 VPS35Q96QK1 796 aa11.54□□□□□ -0.56
GTF3C1-209ENST00000568569 TMEM63CQ9P1W3 806 aa11.54□□□□□ -0.56
GTF3C1-209ENST00000568569 SRPK3Q9UPE1 567 aa11.54□□□□□ -0.56
GTF3C1-209ENST00000568569 SHOC2Q9UQ13 582 aa11.54□□□□□ -0.56
GTF3C1-209ENST00000568569 B3GNT3Q9Y2A9 372 aa11.54□□□□□ -0.56
GTF3C1-209ENST00000568569 POLQO75417 2590 aa11.53□□□□□ -0.56
GTF3C1-209ENST00000568569 OR5K3A6NET4 321 aa11.53□□□□□ -0.56
GTF3C1-209ENST00000568569 LRRC53A6NM62 1247 aa11.53□□□□□ -0.56
GTF3C1-209ENST00000568569 DDX3XO00571 662 aaKnown RBP eCLIP11.53□□□□□ -0.56
GTF3C1-209ENST00000568569 KCNJ13O60928 360 aa11.53□□□□□ -0.56
GTF3C1-209ENST00000568569 ZBTB11O95625 1053 aaPredicted RBP11.53□□□□□ -0.56
GTF3C1-209ENST00000568569 CDK11BP21127 795 aaKnown RBP11.53□□□□□ -0.56
GTF3C1-209ENST00000568569 ITGA1P56199 1179 aa11.53□□□□□ -0.56
GTF3C1-209ENST00000568569 RIPPLY3P57055 190 aa11.53□□□□□ -0.56
GTF3C1-209ENST00000568569 MYL5Q02045 173 aa11.53□□□□□ -0.56
GTF3C1-209ENST00000568569 DMPKQ09013 629 aa11.53□□□□□ -0.56
GTF3C1-209ENST00000568569 GPR19Q15760 415 aa11.53□□□□□ -0.56
GTF3C1-209ENST00000568569 PLEKHS1Q5SXH7 462 aa11.53□□□□□ -0.56
GTF3C1-209ENST00000568569 TMTC4Q5T4D3 741 aa11.53□□□□□ -0.56
GTF3C1-209ENST00000568569 CCDC183Q5T5S1 534 aa11.53□□□□□ -0.56
GTF3C1-209ENST00000568569 TMC3Q7Z5M5 1100 aa11.53□□□□□ -0.56
GTF3C1-209ENST00000568569 OOSP2Q86WS3 158 aa11.53□□□□□ -0.56
GTF3C1-209ENST00000568569 DSELQ8IZU8 1212 aa11.53□□□□□ -0.56
GTF3C1-209ENST00000568569 CARFQ8N187 725 aa11.53□□□□□ -0.56
GTF3C1-209ENST00000568569 TTC30BQ8N4P2 665 aa11.53□□□□□ -0.56
GTF3C1-209ENST00000568569 CISD2Q8N5K1 135 aaKnown RBP11.53□□□□□ -0.56
GTF3C1-209ENST00000568569 FAM71BQ8TC56 605 aa11.53□□□□□ -0.56
GTF3C1-209ENST00000568569 ZNF501Q96CX3 271 aaPredicted RBP11.53□□□□□ -0.56
GTF3C1-209ENST00000568569 HDAC11Q96DB2 347 aa11.53□□□□□ -0.56
GTF3C1-209ENST00000568569 SGSM3Q96HU1 749 aa11.53□□□□□ -0.56
GTF3C1-209ENST00000568569 TTC25Q96NG3 672 aa11.53□□□□□ -0.56
GTF3C1-209ENST00000568569 GPR63Q9BZJ6 419 aa11.53□□□□□ -0.56
GTF3C1-209ENST00000568569 FANCEQ9HB96 536 aa11.53□□□□□ -0.56
GTF3C1-209ENST00000568569 MAGEE1Q9HCI5 957 aa11.53□□□□□ -0.56
GTF3C1-209ENST00000568569 SOHLH2Q9NX45 425 aa11.53□□□□□ -0.56
GTF3C1-209ENST00000568569 C5AR2Q9P296 337 aa11.53□□□□□ -0.56
GTF3C1-209ENST00000568569 IP6K2Q9UHH9 426 aa11.53□□□□□ -0.56
GTF3C1-209ENST00000568569 ZNF711Q9Y462 761 aa11.53□□□□□ -0.56
GTF3C1-209ENST00000568569 HNRNPRO43390 633 aaKnown RBP11.52□□□□□ -0.57
GTF3C1-209ENST00000568569 ALPPP05187 535 aa11.52□□□□□ -0.57
GTF3C1-209ENST00000568569 PIRTP0C851 137 aa11.52□□□□□ -0.57
GTF3C1-209ENST00000568569 BPIP17213 487 aa11.52□□□□□ -0.57
GTF3C1-209ENST00000568569 POU3F2P20265 443 aaPredicted RBP11.52□□□□□ -0.57
GTF3C1-209ENST00000568569 RORAP35398 523 aa11.52□□□□□ -0.57
GTF3C1-209ENST00000568569 PRKCIP41743 596 aa11.52□□□□□ -0.57
GTF3C1-209ENST00000568569 CDK18Q07002 472 aa11.52□□□□□ -0.57
GTF3C1-209ENST00000568569 TMEM115Q12893 351 aaPredicted RBP11.52□□□□□ -0.57
GTF3C1-209ENST00000568569 RAPSNQ13702 412 aa11.52□□□□□ -0.57
GTF3C1-209ENST00000568569 ATP1A4Q13733 1029 aa11.52□□□□□ -0.57
GTF3C1-209ENST00000568569 DPYSL3Q14195 570 aa11.52□□□□□ -0.57
GTF3C1-209ENST00000568569 RPE65Q16518 533 aa11.52□□□□□ -0.57
GTF3C1-209ENST00000568569 PLEKHN1Q494U1 663 aaPredicted RBP11.52□□□□□ -0.57
GTF3C1-209ENST00000568569 FAM69BQ5VUD6 431 aa11.52□□□□□ -0.57
GTF3C1-209ENST00000568569 LCN10Q6JVE6 187 aa11.52□□□□□ -0.57
GTF3C1-209ENST00000568569 FAM198BQ6UWH4 519 aa11.52□□□□□ -0.57
GTF3C1-209ENST00000568569 APTXQ7Z2E3 356 aaKnown RBP11.52□□□□□ -0.57
GTF3C1-209ENST00000568569 AMZ2Q86W34 360 aa11.52□□□□□ -0.57
GTF3C1-209ENST00000568569 ZBTB2Q8N680 514 aa11.52□□□□□ -0.57
GTF3C1-209ENST00000568569 GDAP1Q8TB36 358 aa11.52□□□□□ -0.57
GTF3C1-209ENST00000568569 MOCOSQ96EN8 888 aa11.52□□□□□ -0.57
GTF3C1-209ENST00000568569 TRIB3Q96RU7 358 aa11.52□□□□□ -0.57
GTF3C1-209ENST00000568569 ZNF670Q9BS34 389 aa11.52□□□□□ -0.57
GTF3C1-209ENST00000568569 XPO4Q9C0E2 1151 aaKnown RBP11.52□□□□□ -0.57
GTF3C1-209ENST00000568569 ISCUQ9H1K1 167 aa11.52□□□□□ -0.57
GTF3C1-209ENST00000568569 HRASLS2Q9NWW9 162 aa11.52□□□□□ -0.57
GTF3C1-209ENST00000568569 ANAPC7Q9UJX3 599 aa11.52□□□□□ -0.57
GTF3C1-209ENST00000568569 BTRCQ9Y297 605 aa11.52□□□□□ -0.57
GTF3C1-209ENST00000568569 KCNK1O00180 336 aa11.51□□□□□ -0.57
GTF3C1-209ENST00000568569 KLHL41O60662 606 aa11.51□□□□□ -0.57
GTF3C1-209ENST00000568569 MTHFD1P11586 935 aaKnown RBP11.51□□□□□ -0.57
GTF3C1-209ENST00000568569 SSR1P43307 286 aaKnown RBP11.51□□□□□ -0.57
GTF3C1-209ENST00000568569 ARSEP51690 589 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms