RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 PRAMEF19Q5SWL8 479 aa7.55□□□□□ -1.2
ATXN3-250ENST00000568290 CLEC6AQ6EIG7 209 aa7.55□□□□□ -1.2
ATXN3-250ENST00000568290 PTRHD1Q6GMV3 140 aaKnown RBP7.55□□□□□ -1.2
ATXN3-250ENST00000568290 GLYATQ6IB77 296 aa7.55□□□□□ -1.2
ATXN3-250ENST00000568290 GDF6Q6KF10 455 aaPredicted RBP7.55□□□□□ -1.2
ATXN3-250ENST00000568290 ERICH5Q6P6B1 374 aa7.55□□□□□ -1.2
ATXN3-250ENST00000568290 ZNF549Q6P9A3 640 aa7.55□□□□□ -1.2
ATXN3-250ENST00000568290 C17orf99Q6UX52 265 aa7.55□□□□□ -1.2
ATXN3-250ENST00000568290 ATG14Q6ZNE5 492 aa7.55□□□□□ -1.2
ATXN3-250ENST00000568290 THAP5Q7Z6K1 395 aa7.55□□□□□ -1.2
ATXN3-250ENST00000568290 AMIGO2Q86SJ2 522 aa7.55□□□□□ -1.2
ATXN3-250ENST00000568290 LRRTM3Q86VH5 581 aa7.55□□□□□ -1.2
ATXN3-250ENST00000568290 ZFAND4Q86XD8 727 aa7.55□□□□□ -1.2
ATXN3-250ENST00000568290 SPPL2CQ8IUH8 684 aa7.55□□□□□ -1.2
ATXN3-250ENST00000568290 CLVS1Q8IUQ0 354 aaPredicted RBP7.55□□□□□ -1.2
ATXN3-250ENST00000568290 MFSD6LQ8IWD5 586 aa7.55□□□□□ -1.2
ATXN3-250ENST00000568290 ADGRG5Q8IZF4 528 aa7.55□□□□□ -1.2
ATXN3-250ENST00000568290 LGI2Q8N0V4 545 aa7.55□□□□□ -1.2
ATXN3-250ENST00000568290 TMEM132CQ8N3T6 1108 aa7.55□□□□□ -1.2
ATXN3-250ENST00000568290 SPATA6LQ8N4H0 392 aa7.55□□□□□ -1.2
ATXN3-250ENST00000568290 FIBCD1Q8N539 461 aa7.55□□□□□ -1.2
ATXN3-250ENST00000568290 PAF1Q8N7H5 531 aa7.55□□□□□ -1.2
ATXN3-250ENST00000568290 SNX31Q8N9S9 440 aa7.55□□□□□ -1.2
ATXN3-250ENST00000568290 NETO2Q8NC67 525 aa7.55□□□□□ -1.2
ATXN3-250ENST00000568290 OR10T2Q8NGX3 314 aa7.55□□□□□ -1.2
ATXN3-250ENST00000568290 ANKRD49Q8WVL7 239 aa7.55□□□□□ -1.2
ATXN3-250ENST00000568290 HDAC2Q92769 488 aaKnown RBP7.55□□□□□ -1.2
ATXN3-250ENST00000568290 LPPQ93052 612 aa7.55□□□□□ -1.2
ATXN3-250ENST00000568290 EXT2Q93063 718 aa7.55□□□□□ -1.2
ATXN3-250ENST00000568290 TMEM125Q96AQ2 219 aa7.55□□□□□ -1.2
ATXN3-250ENST00000568290 ULK4Q96C45 1275 aa7.55□□□□□ -1.2
ATXN3-250ENST00000568290 METTL2AQ96IZ6 378 aaKnown RBP7.55□□□□□ -1.2
ATXN3-250ENST00000568290 DNAJC1Q96KC8 554 aaKnown RBP7.55□□□□□ -1.2
ATXN3-250ENST00000568290 TSEN34Q9BSV6 310 aaKnown RBP7.55□□□□□ -1.2
ATXN3-250ENST00000568290 TTLL2Q9BWV7 592 aa7.55□□□□□ -1.2
ATXN3-250ENST00000568290 TDRD1Q9BXT4 1180 aaKnown RBP7.55□□□□□ -1.2
ATXN3-250ENST00000568290 ASPSCR1Q9BZE9 553 aa7.55□□□□□ -1.2
ATXN3-250ENST00000568290 CXorf21Q9HAI6 301 aa7.55□□□□□ -1.2
ATXN3-250ENST00000568290 RDH14Q9HBH5 336 aa7.55□□□□□ -1.2
ATXN3-250ENST00000568290 ANKHQ9HCJ1 492 aa7.55□□□□□ -1.2
ATXN3-250ENST00000568290 RAD18Q9NS91 495 aa7.55□□□□□ -1.2
ATXN3-250ENST00000568290 OLAHQ9NV23 265 aa7.55□□□□□ -1.2
ATXN3-250ENST00000568290 TMEM161AQ9NX61 479 aa7.55□□□□□ -1.2
ATXN3-250ENST00000568290 TRPM5Q9NZQ8 1165 aa7.55□□□□□ -1.2
ATXN3-250ENST00000568290 ENOPH1Q9UHY7 261 aa7.55□□□□□ -1.2
ATXN3-250ENST00000568290 PACSIN3Q9UKS6 424 aa7.55□□□□□ -1.2
ATXN3-250ENST00000568290 AGO1Q9UL18 857 aaKnown RBP7.55□□□□□ -1.2
ATXN3-250ENST00000568290 LRFN2Q9ULH4 789 aa7.55□□□□□ -1.2
ATXN3-250ENST00000568290 CORO2BQ9UQ03 480 aa7.55□□□□□ -1.2
ATXN3-250ENST00000568290 ZNF510Q9Y2H8 683 aa7.55□□□□□ -1.2
ATXN3-250ENST00000568290 DHRS7Q9Y394 339 aa7.55□□□□□ -1.2
ATXN3-250ENST00000568290 MAP4K5Q9Y4K4 846 aa7.55□□□□□ -1.2
ATXN3-250ENST00000568290 SH3PXD2BA1X283 911 aa7.54□□□□□ -1.2
ATXN3-250ENST00000568290 C7orf72A4D263 438 aa7.54□□□□□ -1.2
ATXN3-250ENST00000568290 TRIM64A6NGJ6 449 aa7.54□□□□□ -1.2
ATXN3-250ENST00000568290 EVPLLA8MZ36 301 aa7.54□□□□□ -1.2
ATXN3-250ENST00000568290 QSOX1O00391 747 aa7.54□□□□□ -1.2
ATXN3-250ENST00000568290 NME4O00746 187 aa7.54□□□□□ -1.2
ATXN3-250ENST00000568290 TLR5O60602 858 aa7.54□□□□□ -1.2
ATXN3-250ENST00000568290 UGT2B11O75310 529 aa7.54□□□□□ -1.2
ATXN3-250ENST00000568290 ECI2O75521 394 aa7.54□□□□□ -1.2
ATXN3-250ENST00000568290 CELF2O95319 508 aaKnown RBP7.54□□□□□ -1.2
ATXN3-250ENST00000568290 BCL10O95999 233 aa7.54□□□□□ -1.2
ATXN3-250ENST00000568290 EIF2S1P05198 315 aaKnown RBP7.54□□□□□ -1.2
ATXN3-250ENST00000568290 JUNP05412 331 aaKnown RBP7.54□□□□□ -1.2
ATXN3-250ENST00000568290 RETP07949 1114 aa7.54□□□□□ -1.2
ATXN3-250ENST00000568290 ALDOCP09972 364 aaKnown RBP7.54□□□□□ -1.2
ATXN3-250ENST00000568290 HIST1H2AGP0C0S8 130 aaPredicted RBP7.54□□□□□ -1.2
ATXN3-250ENST00000568290 LINC00032P0C843 101 aa7.54□□□□□ -1.2
ATXN3-250ENST00000568290 EBLN1P0CF75 366 aa7.54□□□□□ -1.2
ATXN3-250ENST00000568290 THRBP10828 461 aa7.54□□□□□ -1.2
ATXN3-250ENST00000568290 HAPLN1P10915 354 aaPredicted RBP7.54□□□□□ -1.2
ATXN3-250ENST00000568290 ETS2P15036 469 aa7.54□□□□□ -1.2
ATXN3-250ENST00000568290 CCNA2P20248 432 aa7.54□□□□□ -1.2
ATXN3-250ENST00000568290 HIST1H2ADP20671 130 aa7.54□□□□□ -1.2
ATXN3-250ENST00000568290 PPIBP23284 216 aaKnown RBP7.54□□□□□ -1.2
ATXN3-250ENST00000568290 MC4RP32245 332 aa7.54□□□□□ -1.2
ATXN3-250ENST00000568290 CCR10P46092 362 aa7.54□□□□□ -1.2
ATXN3-250ENST00000568290 PSMD7P51665 324 aa7.54□□□□□ -1.2
ATXN3-250ENST00000568290 MAXP61244 160 aa7.54□□□□□ -1.2
ATXN3-250ENST00000568290 FAM189BP81408 668 aa7.54□□□□□ -1.2
ATXN3-250ENST00000568290 MVKQ03426 396 aa7.54□□□□□ -1.2
ATXN3-250ENST00000568290 BFSP2Q13515 415 aa7.54□□□□□ -1.2
ATXN3-250ENST00000568290 DAG1Q14118 895 aa7.54□□□□□ -1.2
ATXN3-250ENST00000568290 GK3PQ14409 553 aa7.54□□□□□ -1.2
ATXN3-250ENST00000568290 ARHGEF6Q15052 776 aa7.54□□□□□ -1.2
ATXN3-250ENST00000568290 MAPKAPK3Q16644 382 aa7.54□□□□□ -1.2
ATXN3-250ENST00000568290 PPP1R3AQ16821 1122 aa7.54□□□□□ -1.2
ATXN3-250ENST00000568290 ZRANB3Q5FWF4 1079 aa7.54□□□□□ -1.2
ATXN3-250ENST00000568290 C6orf136Q5SQH8 315 aa7.54□□□□□ -1.2
ATXN3-250ENST00000568290 HECTD3Q5T447 861 aa7.54□□□□□ -1.2
ATXN3-250ENST00000568290 ATG9BQ674R7 924 aa7.54□□□□□ -1.2
ATXN3-250ENST00000568290 GRAMD4Q6IC98 578 aa7.54□□□□□ -1.2
ATXN3-250ENST00000568290 RETSATQ6NUM9 610 aa7.54□□□□□ -1.2
ATXN3-250ENST00000568290 ZNF773Q6PK81 442 aa7.54□□□□□ -1.2
ATXN3-250ENST00000568290 PAQR3Q6TCH7 311 aa7.54□□□□□ -1.2
ATXN3-250ENST00000568290 LRRC8DQ7L1W4 858 aa7.54□□□□□ -1.2
ATXN3-250ENST00000568290 TAS2R42Q7RTR8 314 aa7.54□□□□□ -1.2
ATXN3-250ENST00000568290 MILR1Q7Z6M3 343 aa7.54□□□□□ -1.2
ATXN3-250ENST00000568290 GPR180Q86V85 440 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms