RNA–Protein interactions for RNA: ENST00000568095.5

LINC01541-202, Transcript of long intergenic non-protein coding RNA 1541, humanhuman

TSL 1 (best) BASIC

Gene LINC01541, Length 3,105 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01541-202ENST00000568095 PPP2R2BQ00005 443 aa5.39□□□□□ -1.55
LINC01541-202ENST00000568095 EMX1Q04741 257 aaPredicted RBP5.39□□□□□ -1.55
LINC01541-202ENST00000568095 ORC1Q13415 861 aa5.39□□□□□ -1.55
LINC01541-202ENST00000568095 CDK10Q15131 360 aa5.39□□□□□ -1.55
LINC01541-202ENST00000568095 CYP51A1Q16850 503 aa5.39□□□□□ -1.55
LINC01541-202ENST00000568095 CCDC58Q4VC31 144 aa5.39□□□□□ -1.55
LINC01541-202ENST00000568095 PAGE2BQ5JRK9 111 aa5.39□□□□□ -1.55
LINC01541-202ENST00000568095 GNASQ5JWF2 1037 aa5.39□□□□□ -1.55
LINC01541-202ENST00000568095 SCYL2Q6P3W7 929 aa5.39□□□□□ -1.55
LINC01541-202ENST00000568095 BLOC1S3Q6QNY0 202 aa5.39□□□□□ -1.55
LINC01541-202ENST00000568095 LAYNQ6UX15 382 aa5.39□□□□□ -1.55
LINC01541-202ENST00000568095 KIAA0907Q7Z7F0 614 aaPredicted RBP5.39□□□□□ -1.55
LINC01541-202ENST00000568095 FAM35AQ86V20 835 aa5.39□□□□□ -1.55
LINC01541-202ENST00000568095 CCDC117Q8IWD4 279 aaPredicted RBP5.39□□□□□ -1.55
LINC01541-202ENST00000568095 DCP1BQ8IZD4 617 aaKnown RBP5.39□□□□□ -1.55
LINC01541-202ENST00000568095 C8orf59Q8N0T1 100 aaPredicted RBP5.39□□□□□ -1.55
LINC01541-202ENST00000568095 SVOPQ8N4V2 548 aa5.39□□□□□ -1.55
LINC01541-202ENST00000568095 AFAP1L2Q8N4X5 818 aa5.39□□□□□ -1.55
LINC01541-202ENST00000568095 CCDC185Q8N715 623 aa5.39□□□□□ -1.55
LINC01541-202ENST00000568095 SPERTQ8NA61 448 aa5.39□□□□□ -1.55
LINC01541-202ENST00000568095 OR7A2PQ8NGA2 310 aa5.39□□□□□ -1.55
LINC01541-202ENST00000568095 BIRC7Q96CA5 298 aa5.39□□□□□ -1.55
LINC01541-202ENST00000568095 REXO5Q96IC2 774 aaKnown RBP5.39□□□□□ -1.55
LINC01541-202ENST00000568095 C3orf30Q96M34 536 aa5.39□□□□□ -1.55
LINC01541-202ENST00000568095 MLPHQ9BV36 600 aaPredicted RBP5.39□□□□□ -1.55
LINC01541-202ENST00000568095 AMBRA1Q9C0C7 1298 aa5.39□□□□□ -1.55
LINC01541-202ENST00000568095 MARCH7Q9H992 704 aa5.39□□□□□ -1.55
LINC01541-202ENST00000568095 CCDC177Q9NQR7 707 aaPredicted RBP5.39□□□□□ -1.55
LINC01541-202ENST00000568095 POLE4Q9NR33 117 aa5.39□□□□□ -1.55
LINC01541-202ENST00000568095 SDR39U1Q9NRG7 319 aaPredicted RBP5.39□□□□□ -1.55
LINC01541-202ENST00000568095 TMEM45AQ9NWC5 275 aa5.39□□□□□ -1.55
LINC01541-202ENST00000568095 BFARQ9NZS9 450 aa5.39□□□□□ -1.55
LINC01541-202ENST00000568095 PCDHB3Q9Y5E6 796 aa5.39□□□□□ -1.55
LINC01541-202ENST00000568095 PCDHGA3Q9Y5H0 932 aa5.39□□□□□ -1.55
LINC01541-202ENST00000568095 N6AMT1Q9Y5N5 214 aa5.39□□□□□ -1.55
LINC01541-202ENST00000568095 TRPV2Q9Y5S1 764 aa5.39□□□□□ -1.55
LINC01541-202ENST00000568095 TTC3P53804 2025 aa5.39□□□□□ -1.55
LINC01541-202ENST00000568095 A0A1W2PQ67 120 aa5.39□□□□□ -1.55
LINC01541-202ENST00000568095 A6NL46 340 aa5.39□□□□□ -1.55
LINC01541-202ENST00000568095 A8MT66 165 aa5.39□□□□□ -1.55
LINC01541-202ENST00000568095 SLC1A7O00341 560 aa5.39□□□□□ -1.55
LINC01541-202ENST00000568095 SLC16A6O15403 523 aa5.39□□□□□ -1.55
LINC01541-202ENST00000568095 TULP3O75386 442 aa5.39□□□□□ -1.55
LINC01541-202ENST00000568095 GRAP2O75791 330 aa5.39□□□□□ -1.55
LINC01541-202ENST00000568095 SNX4O95219 450 aa5.39□□□□□ -1.55
LINC01541-202ENST00000568095 NADKO95544 446 aaPredicted RBP5.39□□□□□ -1.55
LINC01541-202ENST00000568095 KRT19P08727 400 aa5.39□□□□□ -1.55
LINC01541-202ENST00000568095 PRR35P0CG20 571 aa5.39□□□□□ -1.55
LINC01541-202ENST00000568095 HNRNPLP14866 589 aaKnown RBP eCLIP5.39□□□□□ -1.55
LINC01541-202ENST00000568095 GOT1P17174 413 aa5.39□□□□□ -1.55
LINC01541-202ENST00000568095 KCNA5P22460 613 aa5.39□□□□□ -1.55
LINC01541-202ENST00000568095 PTPN3P26045 913 aa5.39□□□□□ -1.55
LINC01541-202ENST00000568095 YWHAQP27348 245 aa5.39□□□□□ -1.55
LINC01541-202ENST00000568095 IL12AP29459 219 aa5.39□□□□□ -1.55
LINC01541-202ENST00000568095 ETV6P41212 452 aa5.39□□□□□ -1.55
LINC01541-202ENST00000568095 GLRBP48167 497 aa5.39□□□□□ -1.55
LINC01541-202ENST00000568095 NKX2-5P52952 324 aaPredicted RBP5.39□□□□□ -1.55
LINC01541-202ENST00000568095 LIMK1P53667 647 aa5.39□□□□□ -1.55
LINC01541-202ENST00000568095 P2RX3P56373 397 aa5.39□□□□□ -1.55
LINC01541-202ENST00000568095 STX1BP61266 288 aa5.39□□□□□ -1.55
LINC01541-202ENST00000568095 NFKB2Q00653 900 aa5.39□□□□□ -1.55
LINC01541-202ENST00000568095 GRIK2Q13002 908 aa5.39□□□□□ -1.55
LINC01541-202ENST00000568095 IL18R1Q13478 541 aa5.39□□□□□ -1.55
LINC01541-202ENST00000568095 OLIG2Q13516 323 aa5.39□□□□□ -1.55
LINC01541-202ENST00000568095 USP10Q14694 798 aaKnown RBP5.39□□□□□ -1.55
LINC01541-202ENST00000568095 TOMM20Q15388 145 aa5.39□□□□□ -1.55
LINC01541-202ENST00000568095 ZC3H12BQ5HYM0 836 aaKnown RBP5.39□□□□□ -1.55
LINC01541-202ENST00000568095 FBXO47Q5MNV8 452 aa5.39□□□□□ -1.55
LINC01541-202ENST00000568095 CCNJQ5T5M9 372 aa5.39□□□□□ -1.55
LINC01541-202ENST00000568095 KIAA0319Q5VV43 1072 aa5.39□□□□□ -1.55
LINC01541-202ENST00000568095 ZNF691Q5VV52 312 aa5.39□□□□□ -1.55
LINC01541-202ENST00000568095 AGAP6Q5VW22 663 aa5.39□□□□□ -1.55
LINC01541-202ENST00000568095 STEAP3Q658P3 488 aa5.39□□□□□ -1.55
LINC01541-202ENST00000568095 NOTUMQ6P988 496 aa5.39□□□□□ -1.55
LINC01541-202ENST00000568095 RFPL4BQ6ZWI9 263 aa5.39□□□□□ -1.55
LINC01541-202ENST00000568095 RBM23Q86U06 439 aaKnown RBP5.39□□□□□ -1.55
LINC01541-202ENST00000568095 CDR2LQ86X02 465 aaPredicted RBP5.39□□□□□ -1.55
LINC01541-202ENST00000568095 SLC41A1Q8IVJ1 513 aa5.39□□□□□ -1.55
LINC01541-202ENST00000568095 ASCC1Q8N9N2 400 aaKnown RBP5.39□□□□□ -1.55
LINC01541-202ENST00000568095 PCSK9Q8NBP7 692 aaKnown RBP5.39□□□□□ -1.55
LINC01541-202ENST00000568095 HEXDCQ8WVB3 486 aa5.39□□□□□ -1.55
LINC01541-202ENST00000568095 LINC01599Q8WXQ3 324 aa5.39□□□□□ -1.55
LINC01541-202ENST00000568095 NACC2Q96BF6 587 aa5.39□□□□□ -1.55
LINC01541-202ENST00000568095 TSNARE1Q96NA8 513 aa5.39□□□□□ -1.55
LINC01541-202ENST00000568095 AGAP4Q96P64 663 aa5.39□□□□□ -1.55
LINC01541-202ENST00000568095 ASB2Q96Q27 587 aa5.39□□□□□ -1.55
LINC01541-202ENST00000568095 SIGLEC11Q96RL6 698 aa5.39□□□□□ -1.55
LINC01541-202ENST00000568095 CDK5RAP1Q96SZ6 601 aaKnown RBP5.39□□□□□ -1.55
LINC01541-202ENST00000568095 SH3GL1Q99961 368 aa5.39□□□□□ -1.55
LINC01541-202ENST00000568095 CHID1Q9BWS9 393 aa5.39□□□□□ -1.55
LINC01541-202ENST00000568095 RNF38Q9H0F5 515 aa5.39□□□□□ -1.55
LINC01541-202ENST00000568095 TOR3AQ9H497 397 aa5.39□□□□□ -1.55
LINC01541-202ENST00000568095 NXF3Q9H4D5 531 aaKnown RBP5.39□□□□□ -1.55
LINC01541-202ENST00000568095 TM9SF3Q9HD45 589 aa5.39□□□□□ -1.55
LINC01541-202ENST00000568095 NGRNQ9NPE2 291 aaKnown RBP5.39□□□□□ -1.55
LINC01541-202ENST00000568095 TSPAN16Q9UKR8 245 aa5.39□□□□□ -1.55
LINC01541-202ENST00000568095 ANGPTL3Q9Y5C1 460 aa5.39□□□□□ -1.55
LINC01541-202ENST00000568095 FAM92AA1XBS5 289 aa5.39□□□□□ -1.55
LINC01541-202ENST00000568095 CLDN24A6NM45 220 aa5.39□□□□□ -1.55
LINC01541-202ENST00000568095 GOLGA8CPA6NN73 597 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms