RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 COL28A1Q2UY09 1125 aa1.93□□□□□ -2.1
SMG1-212ENST00000566328 BBS12Q6ZW61 710 aa1.93□□□□□ -2.1
SMG1-212ENST00000566328 PTOV1Q86YD1 416 aa1.93□□□□□ -2.1
SMG1-212ENST00000566328 GCSAMQ8N6F7 178 aa1.93□□□□□ -2.1
SMG1-212ENST00000566328 OR1J2Q8NGS2 313 aa1.93□□□□□ -2.1
SMG1-212ENST00000566328 SMPDL3BQ92485 455 aa1.93□□□□□ -2.1
SMG1-212ENST00000566328 GTF3AQ92664 365 aaKnown RBP1.93□□□□□ -2.1
SMG1-212ENST00000566328 NSMCE3Q96MG7 304 aa1.93□□□□□ -2.1
SMG1-212ENST00000566328 TMEM39BQ9GZU3 492 aa1.93□□□□□ -2.1
SMG1-212ENST00000566328 MAGIXQ9H6Y5 334 aa1.93□□□□□ -2.1
SMG1-212ENST00000566328 SLC6A13Q9NSD5 602 aa1.93□□□□□ -2.1
SMG1-212ENST00000566328 ERAP1Q9NZ08 941 aa1.93□□□□□ -2.1
SMG1-212ENST00000566328 EPHA6Q9UF33 1036 aa1.93□□□□□ -2.1
SMG1-212ENST00000566328 ZDHHC2Q9UIJ5 367 aa1.93□□□□□ -2.1
SMG1-212ENST00000566328 HAO1Q9UJM8 370 aa1.93□□□□□ -2.1
SMG1-212ENST00000566328 TUBE1Q9UJT0 475 aa1.93□□□□□ -2.1
SMG1-212ENST00000566328 ZNF646O15015 1829 aaPredicted RBP1.92□□□□□ -2.1
SMG1-212ENST00000566328 CROCCQ5TZA2 2017 aa1.92□□□□□ -2.1
SMG1-212ENST00000566328 KANSL1LA0AUZ9 987 aa1.92□□□□□ -2.1
SMG1-212ENST00000566328 OR6C76A6NM76 312 aa1.92□□□□□ -2.1
SMG1-212ENST00000566328 ZNF197O14709 1029 aa1.92□□□□□ -2.1
SMG1-212ENST00000566328 TSPAN4O14817 238 aa1.92□□□□□ -2.1
SMG1-212ENST00000566328 JRKO75564 520 aa1.92□□□□□ -2.1
SMG1-212ENST00000566328 WISP2O76076 250 aa1.92□□□□□ -2.1
SMG1-212ENST00000566328 IGHV3-13P01766 116 aa1.92□□□□□ -2.1
SMG1-212ENST00000566328 IFIT1P09914 478 aaKnown RBP1.92□□□□□ -2.1
SMG1-212ENST00000566328 ITIH1P19827 911 aa1.92□□□□□ -2.1
SMG1-212ENST00000566328 MAGEA11P43364 429 aa1.92□□□□□ -2.1
SMG1-212ENST00000566328 MMP15P51511 669 aa1.92□□□□□ -2.1
SMG1-212ENST00000566328 UBE3AQ05086 875 aa1.92□□□□□ -2.1
SMG1-212ENST00000566328 OLIG2Q13516 323 aa1.92□□□□□ -2.1
SMG1-212ENST00000566328 KCNC3Q14003 757 aa1.92□□□□□ -2.1
SMG1-212ENST00000566328 HLA-BQ31612 363 aa1.92□□□□□ -2.1
SMG1-212ENST00000566328 MAP9Q49MG5 647 aa1.92□□□□□ -2.1
SMG1-212ENST00000566328 RAB6CQ53S08 254 aa1.92□□□□□ -2.1
SMG1-212ENST00000566328 CYP4A22Q5TCH4 519 aa1.92□□□□□ -2.1
SMG1-212ENST00000566328 FAM166AQ6J272 317 aa1.92□□□□□ -2.1
SMG1-212ENST00000566328 RAPH1Q70E73 1250 aa1.92□□□□□ -2.1
SMG1-212ENST00000566328 VPS37AQ8NEZ2 397 aa1.92□□□□□ -2.1
SMG1-212ENST00000566328 NSL1Q96IY1 281 aa1.92□□□□□ -2.1
SMG1-212ENST00000566328 USP28Q96RU2 1077 aa1.92□□□□□ -2.1
SMG1-212ENST00000566328 SMC6Q96SB8 1091 aa1.92□□□□□ -2.1
SMG1-212ENST00000566328 WWTR1Q9GZV5 400 aa1.92□□□□□ -2.1
SMG1-212ENST00000566328 RAB6CQ9H0N0 254 aa1.92□□□□□ -2.1
SMG1-212ENST00000566328 RNF186Q9NXI6 227 aa1.92□□□□□ -2.1
SMG1-212ENST00000566328 HSF4Q9ULV5 492 aa1.92□□□□□ -2.1
SMG1-212ENST00000566328 SLC7A7Q9UM01 511 aa1.92□□□□□ -2.1
SMG1-212ENST00000566328 CELA1Q9UNI1 258 aa1.92□□□□□ -2.1
SMG1-212ENST00000566328 CECR2Q9BXF3 1484 aa1.91□□□□□ -2.1
SMG1-212ENST00000566328 IGLV9-49A0A0B4J1Y8 123 aa1.91□□□□□ -2.1
SMG1-212ENST00000566328 FAM237AA0A1B0GTK4 181 aa1.91□□□□□ -2.1
SMG1-212ENST00000566328 KLF11O14901 512 aa1.91□□□□□ -2.1
SMG1-212ENST00000566328 PPM1GO15355 546 aaPredicted RBP1.91□□□□□ -2.1
SMG1-212ENST00000566328 MLYCDO95822 493 aa1.91□□□□□ -2.1
SMG1-212ENST00000566328 PIK3R1P27986 724 aa1.91□□□□□ -2.1
SMG1-212ENST00000566328 CPOXP36551 454 aa1.91□□□□□ -2.1
SMG1-212ENST00000566328 PRCPP42785 496 aa1.91□□□□□ -2.1
SMG1-212ENST00000566328 GSDMDP57764 484 aa1.91□□□□□ -2.1
SMG1-212ENST00000566328 RPS18P62269 152 aaKnown RBP1.91□□□□□ -2.1
SMG1-212ENST00000566328 CDC16Q13042 620 aa1.91□□□□□ -2.1
SMG1-212ENST00000566328 GPR17Q13304 367 aa1.91□□□□□ -2.1
SMG1-212ENST00000566328 DRP2Q13474 957 aa1.91□□□□□ -2.1
SMG1-212ENST00000566328 TAF13Q15543 124 aa1.91□□□□□ -2.1
SMG1-212ENST00000566328 PNLIPRP3Q17RR3 467 aa1.91□□□□□ -2.1
SMG1-212ENST00000566328 HIGD2BQ4VC39 106 aa1.91□□□□□ -2.1
SMG1-212ENST00000566328 SLC9B1Q4ZJI4 515 aa1.91□□□□□ -2.1
SMG1-212ENST00000566328 ANO1Q5XXA6 986 aa1.91□□□□□ -2.1
SMG1-212ENST00000566328 ATG9AQ7Z3C6 839 aa1.91□□□□□ -2.1
SMG1-212ENST00000566328 TBC1D1Q86TI0 1168 aaPredicted RBP1.91□□□□□ -2.1
SMG1-212ENST00000566328 FGFRL1Q8N441 504 aa1.91□□□□□ -2.1
SMG1-212ENST00000566328 Q8N7P7 452 aa1.91□□□□□ -2.1
SMG1-212ENST00000566328 ZNF383Q8NA42 475 aa1.91□□□□□ -2.1
SMG1-212ENST00000566328 SLC38A9Q8NBW4 561 aa1.91□□□□□ -2.1
SMG1-212ENST00000566328 PRSS33Q8NF86 280 aa1.91□□□□□ -2.1
SMG1-212ENST00000566328 OR14L1PQ8NHC6 308 aa1.91□□□□□ -2.1
SMG1-212ENST00000566328 SEMA4DQ92854 862 aa1.91□□□□□ -2.1
SMG1-212ENST00000566328 ARSGQ96EG1 525 aa1.91□□□□□ -2.1
SMG1-212ENST00000566328 KIF1BPQ96EK5 621 aa1.91□□□□□ -2.1
SMG1-212ENST00000566328 PPP1R13BQ96KQ4 1090 aa1.91□□□□□ -2.1
SMG1-212ENST00000566328 FUCA2Q9BTY2 467 aa1.91□□□□□ -2.1
SMG1-212ENST00000566328 KIF9Q9HAQ2 790 aa1.91□□□□□ -2.1
SMG1-212ENST00000566328 BRF2Q9HAW0 419 aa1.91□□□□□ -2.1
SMG1-212ENST00000566328 OLFML3Q9NRN5 406 aa1.91□□□□□ -2.1
SMG1-212ENST00000566328 NUDT4Q9NZJ9 180 aa1.91□□□□□ -2.1
SMG1-212ENST00000566328 MAU2Q9Y6X3 613 aa1.91□□□□□ -2.1
SMG1-212ENST00000566328 CC2D2AQ9P2K1 1620 aa1.91□□□□□ -2.1
SMG1-212ENST00000566328 SOS1Q07889 1333 aaPredicted RBP1.91□□□□□ -2.1
SMG1-212ENST00000566328 ZCCHC6Q5VYS8 1495 aaKnown RBP1.9□□□□□ -2.11
SMG1-212ENST00000566328 IGHV3OR16-10A0A075B7F0 116 aa1.9□□□□□ -2.11
SMG1-212ENST00000566328 IFNL4K9M1U5 179 aa1.9□□□□□ -2.11
SMG1-212ENST00000566328 SOCS3O14543 225 aa1.9□□□□□ -2.11
SMG1-212ENST00000566328 KHDRBS3O75525 346 aaKnown RBP1.9□□□□□ -2.11
SMG1-212ENST00000566328 SEC31AO94979 1220 aaKnown RBP1.9□□□□□ -2.11
SMG1-212ENST00000566328 H1F0P07305 194 aaKnown RBP1.9□□□□□ -2.11
SMG1-212ENST00000566328 CKMT2P17540 419 aa1.9□□□□□ -2.11
SMG1-212ENST00000566328 RBMS1P29558 406 aaKnown RBP1.9□□□□□ -2.11
SMG1-212ENST00000566328 GRK6P43250 576 aa1.9□□□□□ -2.11
SMG1-212ENST00000566328 CDH11P55287 796 aa1.9□□□□□ -2.11
SMG1-212ENST00000566328 TRA2BP62995 288 aaKnown RBP1.9□□□□□ -2.11
SMG1-212ENST00000566328 DLK1P80370 383 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms