RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 FBXO39Q8N4B4 442 aa4.33□□□□□ -1.72
CHD9-215ENST00000565442 GCSAMQ8N6F7 178 aa4.33□□□□□ -1.72
CHD9-215ENST00000565442 POMGNT2Q8NAT1 580 aa4.33□□□□□ -1.72
CHD9-215ENST00000565442 RTP4Q96DX8 246 aa4.33□□□□□ -1.72
CHD9-215ENST00000565442 DGAT2Q96PD7 388 aa4.33□□□□□ -1.72
CHD9-215ENST00000565442 CCDC106Q9BWC9 280 aa4.33□□□□□ -1.72
CHD9-215ENST00000565442 MRPL1Q9BYD6 325 aaKnown RBP4.33□□□□□ -1.72
CHD9-215ENST00000565442 SEMA6AQ9H2E6 1030 aa4.33□□□□□ -1.72
CHD9-215ENST00000565442 LRRC4Q9HBW1 653 aa4.33□□□□□ -1.72
CHD9-215ENST00000565442 TMEM30AQ9NV96 361 aa4.33□□□□□ -1.72
CHD9-215ENST00000565442 KLHL9Q9P2J3 617 aa4.33□□□□□ -1.72
CHD9-215ENST00000565442 AMACRQ9UHK6 382 aa4.33□□□□□ -1.72
CHD9-215ENST00000565442 VDAC3Q9Y277 283 aa4.33□□□□□ -1.72
CHD9-215ENST00000565442 TRIP12Q14669 1992 aaPredicted RBP4.33□□□□□ -1.72
CHD9-215ENST00000565442 LILRA5A6NI73 299 aa4.32□□□□□ -1.72
CHD9-215ENST00000565442 H0YIN7 160 aa4.32□□□□□ -1.72
CHD9-215ENST00000565442 NDUFS4O43181 175 aa4.32□□□□□ -1.72
CHD9-215ENST00000565442 PSMD10O75832 226 aa4.32□□□□□ -1.72
CHD9-215ENST00000565442 CAMTA2O94983 1202 aa4.32□□□□□ -1.72
CHD9-215ENST00000565442 CSPG5O95196 566 aa4.32□□□□□ -1.72
CHD9-215ENST00000565442 VPREB1P12018 145 aa4.32□□□□□ -1.72
CHD9-215ENST00000565442 GJA1P17302 382 aa4.32□□□□□ -1.72
CHD9-215ENST00000565442 DNASE1P24855 282 aa4.32□□□□□ -1.72
CHD9-215ENST00000565442 CAPZA2P47755 286 aa4.32□□□□□ -1.72
CHD9-215ENST00000565442 PPP5CP53041 499 aa4.32□□□□□ -1.72
CHD9-215ENST00000565442 SIRPAP78324 504 aa4.32□□□□□ -1.72
CHD9-215ENST00000565442 RELQ04864 619 aaPredicted RBP4.32□□□□□ -1.72
CHD9-215ENST00000565442 KIF5AQ12840 1032 aa4.32□□□□□ -1.72
CHD9-215ENST00000565442 TMEM35AQ53FP2 167 aa4.32□□□□□ -1.72
CHD9-215ENST00000565442 GFI1BQ5VTD9 330 aa4.32□□□□□ -1.72
CHD9-215ENST00000565442 DHRS7BQ6IAN0 325 aaPredicted RBP4.32□□□□□ -1.72
CHD9-215ENST00000565442 TEX38Q6PEX7 206 aa4.32□□□□□ -1.72
CHD9-215ENST00000565442 PLPPR4Q7Z2D5 763 aa4.32□□□□□ -1.72
CHD9-215ENST00000565442 ADIPOR2Q86V24 386 aa4.32□□□□□ -1.72
CHD9-215ENST00000565442 TMEM219Q86XT9 240 aa4.32□□□□□ -1.72
CHD9-215ENST00000565442 FOXP4Q8IVH2 680 aaPredicted RBP4.32□□□□□ -1.72
CHD9-215ENST00000565442 ZNF441Q8N8Z8 693 aa4.32□□□□□ -1.72
CHD9-215ENST00000565442 RBM15BQ8NDT2 890 aaKnown RBP4.32□□□□□ -1.72
CHD9-215ENST00000565442 BBS10Q8TAM1 723 aa4.32□□□□□ -1.72
CHD9-215ENST00000565442 PPP4R1Q8TF05 950 aa4.32□□□□□ -1.72
CHD9-215ENST00000565442 ZFAND2BQ8WV99 257 aa4.32□□□□□ -1.72
CHD9-215ENST00000565442 NUDCD2Q8WVJ2 157 aa4.32□□□□□ -1.72
CHD9-215ENST00000565442 FIG4Q92562 907 aa4.32□□□□□ -1.72
CHD9-215ENST00000565442 ZNF385AQ96PM9 386 aaKnown RBP4.32□□□□□ -1.72
CHD9-215ENST00000565442 LRMDAQ9H2I8 198 aa4.32□□□□□ -1.72
CHD9-215ENST00000565442 MMP27Q9H306 513 aa4.32□□□□□ -1.72
CHD9-215ENST00000565442 RCC2Q9P258 522 aaKnown RBP4.32□□□□□ -1.72
CHD9-215ENST00000565442 ZNF711Q9Y462 761 aa4.32□□□□□ -1.72
CHD9-215ENST00000565442 OR5K3A6NET4 321 aa4.31□□□□□ -1.72
CHD9-215ENST00000565442 UBE2CO00762 179 aa4.31□□□□□ -1.72
CHD9-215ENST00000565442 EIF5BO60841 1220 aaKnown RBP4.31□□□□□ -1.72
CHD9-215ENST00000565442 LDB3O75112 727 aa4.31□□□□□ -1.72
CHD9-215ENST00000565442 CREG1O75629 220 aa4.31□□□□□ -1.72
CHD9-215ENST00000565442 HLA-DOBP13765 273 aa4.31□□□□□ -1.72
CHD9-215ENST00000565442 POLR2CP19387 275 aaPredicted RBP4.31□□□□□ -1.72
CHD9-215ENST00000565442 CTSCP53634 463 aa4.31□□□□□ -1.72
CHD9-215ENST00000565442 SNRPEP62304 92 aaKnown RBP4.31□□□□□ -1.72
CHD9-215ENST00000565442 RUNX1T1Q06455 604 aa4.31□□□□□ -1.72
CHD9-215ENST00000565442 ZBTB17Q13105 803 aa4.31□□□□□ -1.72
CHD9-215ENST00000565442 ZNF234Q14588 700 aa4.31□□□□□ -1.72
CHD9-215ENST00000565442 ASIC2Q16515 512 aa4.31□□□□□ -1.72
CHD9-215ENST00000565442 C9orf152Q5JTZ5 239 aa4.31□□□□□ -1.72
CHD9-215ENST00000565442 ERMARDQ5T6L9 678 aa4.31□□□□□ -1.72
CHD9-215ENST00000565442 TMEM211Q6ICI0 200 aa4.31□□□□□ -1.72
CHD9-215ENST00000565442 OR7E24Q6IFN5 339 aa4.31□□□□□ -1.72
CHD9-215ENST00000565442 TRNP1Q6NT89 227 aa4.31□□□□□ -1.72
CHD9-215ENST00000565442 Q75L30 129 aa4.31□□□□□ -1.72
CHD9-215ENST00000565442 ARMC9Q7Z3E5 817 aa4.31□□□□□ -1.72
CHD9-215ENST00000565442 SFR1Q86XK3 245 aa4.31□□□□□ -1.72
CHD9-215ENST00000565442 CEP57Q86XR8 500 aa4.31□□□□□ -1.72
CHD9-215ENST00000565442 C1orf52Q8N6N3 182 aaKnown RBP4.31□□□□□ -1.72
CHD9-215ENST00000565442 OR52I2Q8NH67 350 aa4.31□□□□□ -1.72
CHD9-215ENST00000565442 WDR20Q8TBZ3 569 aa4.31□□□□□ -1.72
CHD9-215ENST00000565442 TAS1R2Q8TE23 839 aa4.31□□□□□ -1.72
CHD9-215ENST00000565442 SECISBP2LQ93073 1101 aaKnown RBP4.31□□□□□ -1.72
CHD9-215ENST00000565442 CDCA5Q96FF9 252 aa4.31□□□□□ -1.72
CHD9-215ENST00000565442 PGAP3Q96FM1 320 aaPredicted RBP4.31□□□□□ -1.72
CHD9-215ENST00000565442 BICD1Q96G01 975 aa4.31□□□□□ -1.72
CHD9-215ENST00000565442 CNDP2Q96KP4 475 aaKnown RBP4.31□□□□□ -1.72
CHD9-215ENST00000565442 GOLPH3LQ9H4A5 285 aa4.31□□□□□ -1.72
CHD9-215ENST00000565442 DENND2DQ9H6A0 471 aaPredicted RBP4.31□□□□□ -1.72
CHD9-215ENST00000565442 UBTD1Q9HAC8 227 aa4.31□□□□□ -1.72
CHD9-215ENST00000565442 CCDC177Q9NQR7 707 aaPredicted RBP4.31□□□□□ -1.72
CHD9-215ENST00000565442 GDE1Q9NZC3 331 aa4.31□□□□□ -1.72
CHD9-215ENST00000565442 CRNNQ9UBG3 495 aaPredicted RBP4.31□□□□□ -1.72
CHD9-215ENST00000565442 ANAPC2Q9UJX6 822 aa4.31□□□□□ -1.72
CHD9-215ENST00000565442 RALYQ9UKM9 306 aaKnown RBP4.31□□□□□ -1.72
CHD9-215ENST00000565442 WBP11Q9Y2W2 641 aaKnown RBP4.31□□□□□ -1.72
CHD9-215ENST00000565442 SAA2-SAA4A0A096LPE2 208 aa4.3□□□□□ -1.72
CHD9-215ENST00000565442 OR2M5A3KFT3 312 aa4.3□□□□□ -1.72
CHD9-215ENST00000565442 MAGEA13PA6NCF6 341 aa4.3□□□□□ -1.72
CHD9-215ENST00000565442 SERINC4A6NH21 518 aa4.3□□□□□ -1.72
CHD9-215ENST00000565442 IFITM10A6NMD0 228 aa4.3□□□□□ -1.72
CHD9-215ENST00000565442 WISP2O76076 250 aa4.3□□□□□ -1.72
CHD9-215ENST00000565442 PPP1R3DO95685 299 aa4.3□□□□□ -1.72
CHD9-215ENST00000565442 DAOP14920 347 aa4.3□□□□□ -1.72
CHD9-215ENST00000565442 NR2F2P24468 414 aa4.3□□□□□ -1.72
CHD9-215ENST00000565442 GABRA5P31644 462 aa4.3□□□□□ -1.72
CHD9-215ENST00000565442 USP8P40818 1118 aa4.3□□□□□ -1.72
CHD9-215ENST00000565442 CDH13P55290 713 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms