RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 CILP2Q8IUL8 1156 aa25.57■■□□□ 1.68
NME3-208ENST00000565379 PHACTR4Q8IZ21 702 aa25.57■■□□□ 1.68
NME3-208ENST00000565379 SDR16C5Q8N3Y7 309 aa25.57■■□□□ 1.68
NME3-208ENST00000565379 OR1E3Q8WZA6 343 aa25.57■■□□□ 1.68
NME3-208ENST00000565379 C9orf72Q96LT7 481 aa25.57■■□□□ 1.68
NME3-208ENST00000565379 INTS10Q9NVR2 710 aaKnown RBP25.57■■□□□ 1.68
NME3-208ENST00000565379 TRNAU1APQ9NX07 287 aaKnown RBP25.57■■□□□ 1.68
NME3-208ENST00000565379 MOCS1Q9NZB8 636 aa25.57■■□□□ 1.68
NME3-208ENST00000565379 KLF15Q9UIH9 416 aa25.57■■□□□ 1.68
NME3-208ENST00000565379 MOSPD1Q9UJG1 213 aa25.57■■□□□ 1.68
NME3-208ENST00000565379 GPSM3Q9Y4H4 160 aa25.57■■□□□ 1.68
NME3-208ENST00000565379 DNMT3AQ9Y6K1 912 aaPredicted RBP25.57■■□□□ 1.68
NME3-208ENST00000565379 ITPR1Q14643 2758 aa25.56■■□□□ 1.68
NME3-208ENST00000565379 KLHL33A6NCF5 533 aa25.56■■□□□ 1.68
NME3-208ENST00000565379 DNAJC6O75061 913 aa25.56■■□□□ 1.68
NME3-208ENST00000565379 NDUFS3O75489 264 aa25.56■■□□□ 1.68
NME3-208ENST00000565379 RFPL3O75679 317 aa25.56■■□□□ 1.68
NME3-208ENST00000565379 PIAS2O75928 621 aa25.56■■□□□ 1.68
NME3-208ENST00000565379 ATP1B2P14415 290 aaPredicted RBP25.56■■□□□ 1.68
NME3-208ENST00000565379 ZNF8P17098 575 aaPredicted RBP25.56■■□□□ 1.68
NME3-208ENST00000565379 JUNDP17535 347 aa25.56■■□□□ 1.68
NME3-208ENST00000565379 PHBP35232 272 aa25.56■■□□□ 1.68
NME3-208ENST00000565379 ILF2Q12905 390 aaKnown RBP25.56■■□□□ 1.68
NME3-208ENST00000565379 CAMK2BQ13554 666 aa25.56■■□□□ 1.68
NME3-208ENST00000565379 COL9A2Q14055 689 aaPredicted RBP25.56■■□□□ 1.68
NME3-208ENST00000565379 ERCC6LQ2NKX8 1250 aa25.56■■□□□ 1.68
NME3-208ENST00000565379 KIAA0408Q6ZU52 694 aa25.56■■□□□ 1.68
NME3-208ENST00000565379 LRRC6Q86X45 466 aa25.56■■□□□ 1.68
NME3-208ENST00000565379 GALNT13Q8IUC8 556 aa25.56■■□□□ 1.68
NME3-208ENST00000565379 HID1Q8IV36 788 aa25.56■■□□□ 1.68
NME3-208ENST00000565379 CNTN4Q8IWV2 1026 aa25.56■■□□□ 1.68
NME3-208ENST00000565379 GALNT15Q8N3T1 639 aa25.56■■□□□ 1.68
NME3-208ENST00000565379 FSTL5Q8N475 847 aaPredicted RBP25.56■■□□□ 1.68
NME3-208ENST00000565379 CARS2Q9HA77 564 aaKnown RBP25.56■■□□□ 1.68
NME3-208ENST00000565379 PLAC1Q9HBJ0 212 aa25.56■■□□□ 1.68
NME3-208ENST00000565379 CYP4F12Q9HCS2 524 aa25.56■■□□□ 1.68
NME3-208ENST00000565379 NSMCE4AQ9NXX6 385 aa25.56■■□□□ 1.68
NME3-208ENST00000565379 SPASTQ9UBP0 616 aa25.56■■□□□ 1.68
NME3-208ENST00000565379 SUFUQ9UMX1 484 aa25.56■■□□□ 1.68
NME3-208ENST00000565379 ADAMTS20P59510 1910 aa25.56■■□□□ 1.68
NME3-208ENST00000565379 BAHCC1Q9P281 2608 aa25.56■■□□□ 1.68
NME3-208ENST00000565379 KMOO15229 486 aa25.55■■□□□ 1.68
NME3-208ENST00000565379 GRID2O43424 1007 aa25.55■■□□□ 1.68
NME3-208ENST00000565379 KCNJ13O60928 360 aa25.55■■□□□ 1.68
NME3-208ENST00000565379 MTX2O75431 263 aa25.55■■□□□ 1.68
NME3-208ENST00000565379 STX2P32856 288 aa25.55■■□□□ 1.68
NME3-208ENST00000565379 CA5AP35218 305 aa25.55■■□□□ 1.68
NME3-208ENST00000565379 POLD2P49005 469 aa25.55■■□□□ 1.68
NME3-208ENST00000565379 MGAT5Q09328 741 aa25.55■■□□□ 1.68
NME3-208ENST00000565379 LRP8Q14114 963 aa25.55■■□□□ 1.68
NME3-208ENST00000565379 PYCR3Q53H96 274 aa25.55■■□□□ 1.68
NME3-208ENST00000565379 HSP90AA5PQ58FG0 334 aa25.55■■□□□ 1.68
NME3-208ENST00000565379 ZNF470Q6ECI4 717 aa25.55■■□□□ 1.68
NME3-208ENST00000565379 LRRTM4Q86VH4 590 aa25.55■■□□□ 1.68
NME3-208ENST00000565379 CDKL2Q92772 493 aa25.55■■□□□ 1.68
NME3-208ENST00000565379 TSACCQ96A04 125 aaPredicted RBP25.55■■□□□ 1.68
NME3-208ENST00000565379 PDXPQ96GD0 296 aa25.55■■□□□ 1.68
NME3-208ENST00000565379 LRRC4CQ9HCJ2 640 aa25.55■■□□□ 1.68
NME3-208ENST00000565379 ARFGAP3Q9NP61 516 aa25.55■■□□□ 1.68
NME3-208ENST00000565379 PPANQ9NQ55 473 aaKnown RBP25.55■■□□□ 1.68
NME3-208ENST00000565379 MARCH4Q9P2E8 410 aaPredicted RBP25.55■■□□□ 1.68
NME3-208ENST00000565379 APOBEC3BQ9UH17 382 aaKnown RBP25.55■■□□□ 1.68
NME3-208ENST00000565379 PNMA8BQ9ULN7 279 aaPredicted RBP25.55■■□□□ 1.68
NME3-208ENST00000565379 GSTM1P09488 218 aa25.54■■□□□ 1.68
NME3-208ENST00000565379 PRSS56P0CW18 603 aa25.54■■□□□ 1.68
NME3-208ENST00000565379 CTSEP14091 401 aa25.54■■□□□ 1.68
NME3-208ENST00000565379 ADARP55265 1226 aaKnown RBP25.54■■□□□ 1.68
NME3-208ENST00000565379 GSTM4Q03013 218 aa25.54■■□□□ 1.68
NME3-208ENST00000565379 BCL7AQ4VC05 210 aa25.54■■□□□ 1.68
NME3-208ENST00000565379 KHDC1Q4VXA5 237 aaKnown RBP25.54■■□□□ 1.68
NME3-208ENST00000565379 TRMT10CQ7L0Y3 403 aaKnown RBP25.54■■□□□ 1.68
NME3-208ENST00000565379 RD3Q7Z3Z2 195 aa25.54■■□□□ 1.68
NME3-208ENST00000565379 GALNT7Q86SF2 657 aa25.54■■□□□ 1.68
NME3-208ENST00000565379 RASGEF1AQ8N9B8 481 aa25.54■■□□□ 1.68
NME3-208ENST00000565379 OR2M4Q96R27 311 aa25.54■■□□□ 1.68
NME3-208ENST00000565379 TCEAL2Q9H3H9 227 aaPredicted RBP25.54■■□□□ 1.68
NME3-208ENST00000565379 VPS37BQ9H9H4 285 aa25.54■■□□□ 1.68
NME3-208ENST00000565379 IARS2Q9NSE4 1012 aaKnown RBP25.54■■□□□ 1.68
NME3-208ENST00000565379 DKK4Q9UBT3 224 aa25.54■■□□□ 1.68
NME3-208ENST00000565379 ZNHIT2Q9UHR6 403 aa25.54■■□□□ 1.68
NME3-208ENST00000565379 PCDHGA1Q9Y5H4 931 aa25.54■■□□□ 1.68
NME3-208ENST00000565379 NBEAQ8NFP9 2946 aa25.53■■□□□ 1.68
NME3-208ENST00000565379 TRABD2BA6NFA1 517 aa25.53■■□□□ 1.68
NME3-208ENST00000565379 GOLGA8KD6RF30 607 aa25.53■■□□□ 1.68
NME3-208ENST00000565379 GOLGA8TH3BQL2 631 aa25.53■■□□□ 1.68
NME3-208ENST00000565379 PRMT5O14744 637 aaPredicted RBP25.53■■□□□ 1.68
NME3-208ENST00000565379 ERVK-10P10266 1014 aa25.53■■□□□ 1.68
NME3-208ENST00000565379 RPS3P23396 243 aaKnown RBP eCLIP25.53■■□□□ 1.68
NME3-208ENST00000565379 SSTR1P30872 391 aa25.53■■□□□ 1.68
NME3-208ENST00000565379 GNPDA1P46926 289 aa25.53■■□□□ 1.68
NME3-208ENST00000565379 GPX6P59796 221 aa25.53■■□□□ 1.68
NME3-208ENST00000565379 B4GALNT1Q00973 533 aa25.53■■□□□ 1.68
NME3-208ENST00000565379 SEMA3AQ14563 771 aa25.53■■□□□ 1.68
NME3-208ENST00000565379 ELOCQ15369 112 aa25.53■■□□□ 1.68
NME3-208ENST00000565379 ZNF648Q5T619 568 aaPredicted RBP25.53■■□□□ 1.68
NME3-208ENST00000565379 C19orf48Q6RUI8 117 aa25.53■■□□□ 1.68
NME3-208ENST00000565379 MARK2Q7KZI7 788 aaKnown RBP25.53■■□□□ 1.68
NME3-208ENST00000565379 CLPBQ9H078 707 aa25.53■■□□□ 1.68
NME3-208ENST00000565379 MRPL40Q9NQ50 206 aaKnown RBP25.53■■□□□ 1.68
NME3-208ENST00000565379 ZFATQ9P243 1243 aa25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms