RNA–Protein interactions for RNA: ENST00000565224.5

SMG1-210, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-210ENST00000565224 DOCK3Q8IZD9 2030 aa7.17□□□□□ -1.26
SMG1-210ENST00000565224 TDRD15B5MCY1 1934 aaKnown RBP7.17□□□□□ -1.26
SMG1-210ENST00000565224 H0Y858 1186 aa7.17□□□□□ -1.26
SMG1-210ENST00000565224 IFRD1O00458 451 aaPredicted RBP7.17□□□□□ -1.26
SMG1-210ENST00000565224 SYN3O14994 580 aa7.17□□□□□ -1.26
SMG1-210ENST00000565224 OR1I1O60431 355 aa7.17□□□□□ -1.26
SMG1-210ENST00000565224 PRSS23O95084 383 aa7.17□□□□□ -1.26
SMG1-210ENST00000565224 PRLP01236 227 aa7.17□□□□□ -1.26
SMG1-210ENST00000565224 ANXA6P08133 673 aa7.17□□□□□ -1.26
SMG1-210ENST00000565224 RAP2AP10114 183 aa7.17□□□□□ -1.26
SMG1-210ENST00000565224 LPOP22079 712 aaPredicted RBP7.17□□□□□ -1.26
SMG1-210ENST00000565224 MC4RP32245 332 aa7.17□□□□□ -1.26
SMG1-210ENST00000565224 VEGFBP49765 207 aa7.17□□□□□ -1.26
SMG1-210ENST00000565224 CLCN4P51793 760 aa7.17□□□□□ -1.26
SMG1-210ENST00000565224 OXCT1P55809 520 aa7.17□□□□□ -1.26
SMG1-210ENST00000565224 HUNKP57058 714 aa7.17□□□□□ -1.26
SMG1-210ENST00000565224 MTPNP58546 118 aa7.17□□□□□ -1.26
SMG1-210ENST00000565224 DAG1Q14118 895 aa7.17□□□□□ -1.26
SMG1-210ENST00000565224 SELPLGQ14242 412 aa7.17□□□□□ -1.26
SMG1-210ENST00000565224 ZNF829Q3KNS6 432 aaPredicted RBP7.17□□□□□ -1.26
SMG1-210ENST00000565224 C5orf22Q49AR2 442 aa7.17□□□□□ -1.26
SMG1-210ENST00000565224 FAM98BQ52LJ0 330 aaKnown RBP7.17□□□□□ -1.26
SMG1-210ENST00000565224 PSAPL1Q6NUJ1 521 aa7.17□□□□□ -1.26
SMG1-210ENST00000565224 FAM117BQ6P1L5 589 aa7.17□□□□□ -1.26
SMG1-210ENST00000565224 LETMD1Q6P1Q0 360 aa7.17□□□□□ -1.26
SMG1-210ENST00000565224 IL27RAQ6UWB1 636 aa7.17□□□□□ -1.26
SMG1-210ENST00000565224 CPNE9Q8IYJ1 553 aa7.17□□□□□ -1.26
SMG1-210ENST00000565224 DTWD1Q8N5C7 304 aa7.17□□□□□ -1.26
SMG1-210ENST00000565224 OR52B6Q8NGF0 335 aa7.17□□□□□ -1.26
SMG1-210ENST00000565224 OR13F1Q8NGS4 319 aa7.17□□□□□ -1.26
SMG1-210ENST00000565224 ITFG1Q8TB96 612 aa7.17□□□□□ -1.26
SMG1-210ENST00000565224 TBC1D15Q8TC07 691 aa7.17□□□□□ -1.26
SMG1-210ENST00000565224 METTL6Q8TCB7 284 aa7.17□□□□□ -1.26
SMG1-210ENST00000565224 KCNJ9Q92806 393 aa7.17□□□□□ -1.26
SMG1-210ENST00000565224 BORCS5Q969J3 196 aa7.17□□□□□ -1.26
SMG1-210ENST00000565224 NSMCE3Q96MG7 304 aa7.17□□□□□ -1.26
SMG1-210ENST00000565224 PPM1MQ96MI6 270 aa7.17□□□□□ -1.26
SMG1-210ENST00000565224 MUS81Q96NY9 551 aa7.17□□□□□ -1.26
SMG1-210ENST00000565224 CDK15Q96Q40 435 aa7.17□□□□□ -1.26
SMG1-210ENST00000565224 CGREF1Q99674 301 aa7.17□□□□□ -1.26
SMG1-210ENST00000565224 SPON2Q9BUD6 331 aa7.17□□□□□ -1.26
SMG1-210ENST00000565224 NAA50Q9GZZ1 169 aaKnown RBP7.17□□□□□ -1.26
SMG1-210ENST00000565224 CCSER2Q9H7U1 834 aa7.17□□□□□ -1.26
SMG1-210ENST00000565224 NTN4Q9HB63 628 aa7.17□□□□□ -1.26
SMG1-210ENST00000565224 SCUBE2Q9NQ36 999 aa7.17□□□□□ -1.26
SMG1-210ENST00000565224 TLR9Q9NR96 1032 aa7.17□□□□□ -1.26
SMG1-210ENST00000565224 COMMD8Q9NX08 183 aa7.17□□□□□ -1.26
SMG1-210ENST00000565224 CHCHD3Q9NX63 227 aaKnown RBP7.17□□□□□ -1.26
SMG1-210ENST00000565224 FKBPLQ9UIM3 349 aa7.17□□□□□ -1.26
SMG1-210ENST00000565224 ABT1Q9ULW3 272 aaKnown RBP7.17□□□□□ -1.26
SMG1-210ENST00000565224 ANKRD36A6QL64 1941 aa7.16□□□□□ -1.26
SMG1-210ENST00000565224 E5RI56 91 aa7.16□□□□□ -1.26
SMG1-210ENST00000565224 UPK1AO00322 258 aa7.16□□□□□ -1.26
SMG1-210ENST00000565224 TLR5O60602 858 aa7.16□□□□□ -1.26
SMG1-210ENST00000565224 GMNNO75496 209 aa7.16□□□□□ -1.26
SMG1-210ENST00000565224 HPRP00739 348 aa7.16□□□□□ -1.26
SMG1-210ENST00000565224 ALPLP05186 524 aa7.16□□□□□ -1.26
SMG1-210ENST00000565224 CAPN1P07384 714 aa7.16□□□□□ -1.26
SMG1-210ENST00000565224 HNRNPCP07910 306 aaKnown RBP eCLIP7.16□□□□□ -1.26
SMG1-210ENST00000565224 THRBP10828 461 aa7.16□□□□□ -1.26
SMG1-210ENST00000565224 MBL2P11226 248 aaPredicted RBP7.16□□□□□ -1.26
SMG1-210ENST00000565224 G6PDP11413 515 aa7.16□□□□□ -1.26
SMG1-210ENST00000565224 CYBAP13498 195 aa7.16□□□□□ -1.26
SMG1-210ENST00000565224 JUNBP17275 347 aaPredicted RBP7.16□□□□□ -1.26
SMG1-210ENST00000565224 GGT1P19440 569 aa7.16□□□□□ -1.26
SMG1-210ENST00000565224 CR2P20023 1033 aa7.16□□□□□ -1.26
SMG1-210ENST00000565224 EEF1B2P24534 225 aaKnown RBP7.16□□□□□ -1.26
SMG1-210ENST00000565224 ELK4P28324 431 aa7.16□□□□□ -1.26
SMG1-210ENST00000565224 ARL1P40616 181 aaPredicted RBP7.16□□□□□ -1.26
SMG1-210ENST00000565224 HTR6P50406 440 aa7.16□□□□□ -1.26
SMG1-210ENST00000565224 KCNQ1P51787 676 aa7.16□□□□□ -1.26
SMG1-210ENST00000565224 TMBIM6P55061 237 aa7.16□□□□□ -1.26
SMG1-210ENST00000565224 CHRNB3Q05901 458 aa7.16□□□□□ -1.26
SMG1-210ENST00000565224 PWP1Q13610 501 aa7.16□□□□□ -1.26
SMG1-210ENST00000565224 TGFBIQ15582 683 aa7.16□□□□□ -1.26
SMG1-210ENST00000565224 ZIK1Q3SY52 487 aaPredicted RBP7.16□□□□□ -1.26
SMG1-210ENST00000565224 ZRANB3Q5FWF4 1079 aa7.16□□□□□ -1.26
SMG1-210ENST00000565224 FGD3Q5JSP0 725 aa7.16□□□□□ -1.26
SMG1-210ENST00000565224 CLLU1OSQ5K130 101 aa7.16□□□□□ -1.26
SMG1-210ENST00000565224 BROXQ5VW32 411 aa7.16□□□□□ -1.26
SMG1-210ENST00000565224 CYP20A1Q6UW02 462 aa7.16□□□□□ -1.26
SMG1-210ENST00000565224 C17orf99Q6UX52 265 aa7.16□□□□□ -1.26
SMG1-210ENST00000565224 CHST15Q7LFX5 561 aaPredicted RBP7.16□□□□□ -1.26
SMG1-210ENST00000565224 FAM126BQ8IXS8 530 aa7.16□□□□□ -1.26
SMG1-210ENST00000565224 CLEC4FQ8N1N0 589 aa7.16□□□□□ -1.26
SMG1-210ENST00000565224 AADATQ8N5Z0 425 aa7.16□□□□□ -1.26
SMG1-210ENST00000565224 OR8J3Q8NGG0 315 aa7.16□□□□□ -1.26
SMG1-210ENST00000565224 TMBIM1Q969X1 311 aa7.16□□□□□ -1.26
SMG1-210ENST00000565224 EXOC2Q96KP1 924 aa7.16□□□□□ -1.26
SMG1-210ENST00000565224 CCDC115Q96NT0 180 aa7.16□□□□□ -1.26
SMG1-210ENST00000565224 SMIM14Q96QK8 99 aa7.16□□□□□ -1.26
SMG1-210ENST00000565224 SEPT5Q99719 369 aaPredicted RBP7.16□□□□□ -1.26
SMG1-210ENST00000565224 ZBED2Q9BTP6 218 aa7.16□□□□□ -1.26
SMG1-210ENST00000565224 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.16□□□□□ -1.26
SMG1-210ENST00000565224 ING2Q9H160 280 aa7.16□□□□□ -1.26
SMG1-210ENST00000565224 ACTL8Q9H568 366 aa7.16□□□□□ -1.26
SMG1-210ENST00000565224 FANCEQ9HB96 536 aa7.16□□□□□ -1.26
SMG1-210ENST00000565224 TNPO3Q9Y5L0 923 aaKnown RBP7.16□□□□□ -1.26
SMG1-210ENST00000565224 COMMD10Q9Y6G5 202 aa7.16□□□□□ -1.26
SMG1-210ENST00000565224 OR6C75A6NL08 312 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms