RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 SLC9A7Q96T83 725 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 RUBCNLQ9H714 662 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 MAP10Q9P2G4 905 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 ZC3H7BQ9UGR2 993 aaKnown RBP3.32□□□□□ -1.88
CHD9-213ENST00000564845 RPS6KA6Q9UK32 745 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 Q9Y3F1 56 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 DOCK6Q96HP0 2047 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 TSC2P49815 1807 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 SLC12A8A0AV02 714 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 MTA2O94776 668 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 UBXN7O94888 489 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 LYPLA2O95372 231 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 ALDOAP04075 364 aaKnown RBP3.32□□□□□ -1.88
CHD9-213ENST00000564845 MLNP12872 115 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 IRS1P35568 1242 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 SRSF5Q13243 272 aaKnown RBP3.32□□□□□ -1.88
CHD9-213ENST00000564845 MELKQ14680 651 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 PAMR1Q6UXH9 720 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 GLB1L3Q8NCI6 653 aaPredicted RBP3.32□□□□□ -1.88
CHD9-213ENST00000564845 OR6P1Q8NGX9 317 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 IRGQQ8WZA9 623 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 RAB39BQ96DA2 213 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 GLT1D1Q96MS3 346 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 IL22Q9GZX6 179 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 SMOC2Q9H3U7 446 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 FAM220BPB1ANY3 271 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 TRIM38O00635 465 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 TOR1BO14657 336 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 PMM2O15305 246 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 SMNDC1O75940 238 aaKnown RBP eCLIP3.32□□□□□ -1.88
CHD9-213ENST00000564845 CHRM3P20309 590 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 AGTR2P50052 363 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 PKNOX1P55347 436 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 TAF10Q12962 218 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 TSNQ15631 228 aaKnown RBP3.32□□□□□ -1.88
CHD9-213ENST00000564845 ASB18Q6ZVZ8 466 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 CARNMT1Q8N4J0 409 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 DEFB119Q8N690 84 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 LRRC52Q8N7C0 313 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 ZNF781Q8N8C0 355 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 FLCNQ8NFG4 579 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 GRIN3AQ8TCU5 1115 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 TCEAL4Q96EI5 215 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 FCRL2Q96LA5 508 aaPredicted RBP3.32□□□□□ -1.88
CHD9-213ENST00000564845 RDH12Q96NR8 316 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 CATSPER2Q96P56 530 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 FICDQ9BVA6 458 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 COLEC11Q9BWP8 271 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 SPATA9Q9BWV2 254 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 TMEM121BQ9BXQ6 578 aaPredicted RBP3.32□□□□□ -1.88
CHD9-213ENST00000564845 DCLRE1BQ9H816 532 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 MARCH4Q9P2E8 410 aaPredicted RBP3.32□□□□□ -1.88
CHD9-213ENST00000564845 GLS2Q9UI32 602 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 TMED5Q9Y3A6 229 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 TIMM22Q9Y584 194 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 PDCD11Q14690 1871 aaKnown RBP3.32□□□□□ -1.88
CHD9-213ENST00000564845 CCDC154A6NI56 674 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 PIRO00625 290 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 DNALI1O14645 258 aaPredicted RBP3.32□□□□□ -1.88
CHD9-213ENST00000564845 RECQL5O94762 991 aaPredicted RBP3.32□□□□□ -1.88
CHD9-213ENST00000564845 PBLDP30039 288 aaPredicted RBP3.32□□□□□ -1.88
CHD9-213ENST00000564845 TTPAP49638 278 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 ARSDP51689 593 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 LBX1P52954 281 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 VAC14Q08AM6 782 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 GSTA3Q16772 222 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 TMEM259Q4ZIN3 620 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 SGO1Q5FBB7 561 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 ERICH5Q6P6B1 374 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 TRIM67Q6ZTA4 783 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 USP45Q70EL2 814 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 LRRC8DQ7L1W4 858 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 TMPRSS6Q8IU80 811 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 DND1Q8IYX4 353 aaKnown RBP3.32□□□□□ -1.88
CHD9-213ENST00000564845 LINC01465Q8N7H1 131 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 ZBTB8BQ8NAP8 495 aaPredicted RBP3.32□□□□□ -1.88
CHD9-213ENST00000564845 CDC26Q8NHZ8 85 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 SKA2Q8WVK7 121 aaPredicted RBP3.32□□□□□ -1.88
CHD9-213ENST00000564845 PLEKHA8Q96JA3 519 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 SLC40A1Q9NP59 571 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.32□□□□□ -1.882e-6■■□□□ 11.7
CHD9-213ENST00000564845 C2CD2Q9Y426 696 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 TRBV23OR9-2A0A075B6M9 112 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 HYKKA2RU49 373 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 DUXAA6NLW8 204 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 COPEO14579 308 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 TNFRSF10BO14763 440 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 TRIM3O75382 744 aaPredicted RBP3.32□□□□□ -1.88
CHD9-213ENST00000564845 INMTO95050 263 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 IDO1P14902 403 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 NPR3P17342 541 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 ATF6P18850 670 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 UGT1A6P19224 532 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 DRD4P21917 467 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 UGT1A1P22309 533 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 UGT1A4P22310 534 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 YWHAQP27348 245 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 MZF1P28698 734 aaPredicted RBP3.32□□□□□ -1.88
CHD9-213ENST00000564845 UGT1A3P35503 534 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 UGT1A5P35504 534 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms