RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 RDH14Q9HBH5 336 aa15.34■□□□□ 0.05
COMMD4-210ENST00000564587 TMPRSS11EQ9UL52 423 aa15.34■□□□□ 0.05
COMMD4-210ENST00000564587 SCML1Q9UN30 329 aa15.34■□□□□ 0.05
COMMD4-210ENST00000564587 TRIM33Q9UPN9 1127 aa15.34■□□□□ 0.05
COMMD4-210ENST00000564587 STK38LQ9Y2H1 464 aa15.34■□□□□ 0.05
COMMD4-210ENST00000564587 TICRRQ7Z2Z1 1910 aa15.34■□□□□ 0.05
COMMD4-210ENST00000564587 TRANK1O15050 2925 aa15.33■□□□□ 0.05
COMMD4-210ENST00000564587 PIKFYVEQ9Y2I7 2098 aa15.33■□□□□ 0.04
COMMD4-210ENST00000564587 GRXCR2A6NFK2 248 aa15.33■□□□□ 0.04
COMMD4-210ENST00000564587 ZNF195O14628 629 aa15.33■□□□□ 0.04
COMMD4-210ENST00000564587 SLC16A5O15375 505 aa15.33■□□□□ 0.04
COMMD4-210ENST00000564587 SPINT1O43278 529 aa15.33■□□□□ 0.04
COMMD4-210ENST00000564587 MBTPS2O43462 519 aa15.33■□□□□ 0.04
COMMD4-210ENST00000564587 RECQL5O94762 991 aaPredicted RBP15.33■□□□□ 0.04
COMMD4-210ENST00000564587 FSBPO95073 299 aa15.33■□□□□ 0.04
COMMD4-210ENST00000564587 CHRNGP07510 517 aa15.33■□□□□ 0.04
COMMD4-210ENST00000564587 ENO2P09104 434 aaPredicted RBP15.33■□□□□ 0.04
COMMD4-210ENST00000564587 C6P13671 934 aa15.33■□□□□ 0.04
COMMD4-210ENST00000564587 MPSTP25325 297 aa15.33■□□□□ 0.04
COMMD4-210ENST00000564587 AOAHP28039 575 aa15.33■□□□□ 0.04
COMMD4-210ENST00000564587 TIE1P35590 1138 aa15.33■□□□□ 0.04
COMMD4-210ENST00000564587 SOX9P48436 509 aa15.33■□□□□ 0.04
COMMD4-210ENST00000564587 IDH3AP50213 366 aa15.33■□□□□ 0.04
COMMD4-210ENST00000564587 CCR3P51677 355 aa15.33■□□□□ 0.04
COMMD4-210ENST00000564587 B4GALNT1Q00973 533 aa15.33■□□□□ 0.04
COMMD4-210ENST00000564587 ACTN3Q08043 901 aaPredicted RBP15.33■□□□□ 0.04
COMMD4-210ENST00000564587 CNTN1Q12860 1018 aa15.33■□□□□ 0.04
COMMD4-210ENST00000564587 FBXO43Q4G163 708 aa15.33■□□□□ 0.04
COMMD4-210ENST00000564587 UNC50Q53HI1 259 aa15.33■□□□□ 0.04
COMMD4-210ENST00000564587 TMEM196Q5HYL7 178 aa15.33■□□□□ 0.04
COMMD4-210ENST00000564587 ACAD11Q709F0 780 aa15.33■□□□□ 0.04
COMMD4-210ENST00000564587 EXT2Q93063 718 aa15.33■□□□□ 0.04
COMMD4-210ENST00000564587 ZNF514Q96K75 400 aaPredicted RBP15.33■□□□□ 0.04
COMMD4-210ENST00000564587 CCDC28BQ9BUN5 200 aa15.33■□□□□ 0.04
COMMD4-210ENST00000564587 PHF7Q9BWX1 381 aaPredicted RBP15.33■□□□□ 0.04
COMMD4-210ENST00000564587 GSTO2Q9H4Y5 243 aa15.33■□□□□ 0.04
COMMD4-210ENST00000564587 COG4Q9H9E3 785 aa15.33■□□□□ 0.04
COMMD4-210ENST00000564587 FBRSL1Q9HCM7 1045 aaKnown RBP15.33■□□□□ 0.04
COMMD4-210ENST00000564587 CD274Q9NZQ7 290 aa15.33■□□□□ 0.04
COMMD4-210ENST00000564587 OARD1Q9Y530 152 aa15.33■□□□□ 0.04
COMMD4-210ENST00000564587 GOLGA8QA0A0J9YX86 632 aa15.32■□□□□ 0.04
COMMD4-210ENST00000564587 GOLGA8OA6NCC3 632 aa15.32■□□□□ 0.04
COMMD4-210ENST00000564587 PABPN1LA6NDY0 278 aaKnown RBP15.32■□□□□ 0.04
COMMD4-210ENST00000564587 CFAP73A6NFT4 308 aa15.32■□□□□ 0.04
COMMD4-210ENST00000564587 C2CD4DB7Z1M9 353 aa15.32■□□□□ 0.04
COMMD4-210ENST00000564587 GOLGA8NF8WBI6 632 aa15.32■□□□□ 0.04
COMMD4-210ENST00000564587 H3BQ06 376 aaPredicted RBP15.32■□□□□ 0.04
COMMD4-210ENST00000564587 FCHO1O14526 889 aa15.32■□□□□ 0.04
COMMD4-210ENST00000564587 NUAK1O60285 661 aa15.32■□□□□ 0.04
COMMD4-210ENST00000564587 DIAPH2O60879 1101 aa15.32■□□□□ 0.04
COMMD4-210ENST00000564587 DNAJC8O75937 253 aaPredicted RBP15.32■□□□□ 0.04
COMMD4-210ENST00000564587 MLYCDO95822 493 aa15.32■□□□□ 0.04
COMMD4-210ENST00000564587 C8GP07360 202 aa15.32■□□□□ 0.04
COMMD4-210ENST00000564587 FGF4P08620 206 aa15.32■□□□□ 0.04
COMMD4-210ENST00000564587 GM2AP17900 193 aa15.32■□□□□ 0.04
COMMD4-210ENST00000564587 ITGB6P18564 788 aa15.32■□□□□ 0.04
COMMD4-210ENST00000564587 GPR1P46091 355 aa15.32■□□□□ 0.04
COMMD4-210ENST00000564587 SP140Q13342 867 aa15.32■□□□□ 0.04
COMMD4-210ENST00000564587 GBX1Q14549 363 aa15.32■□□□□ 0.04
COMMD4-210ENST00000564587 AGERQ15109 404 aa15.32■□□□□ 0.04
COMMD4-210ENST00000564587 TGFBIQ15582 683 aa15.32■□□□□ 0.04
COMMD4-210ENST00000564587 PIP5KL1Q5T9C9 394 aa15.32■□□□□ 0.04
COMMD4-210ENST00000564587 EFL1Q7Z2Z2 1120 aaKnown RBP15.32■□□□□ 0.04
COMMD4-210ENST00000564587 CUZD1Q86UP6 607 aa15.32■□□□□ 0.04
COMMD4-210ENST00000564587 SLC44A3Q8N4M1 653 aa15.32■□□□□ 0.04
COMMD4-210ENST00000564587 CHCHD4Q8N4Q1 142 aa15.32■□□□□ 0.04
COMMD4-210ENST00000564587 LKAAEAR1Q8TD35 194 aa15.32■□□□□ 0.04
COMMD4-210ENST00000564587 ASZ1Q8WWH4 475 aa15.32■□□□□ 0.04
COMMD4-210ENST00000564587 TRIM54Q9BYV2 358 aa15.32■□□□□ 0.04
COMMD4-210ENST00000564587 UBE2ZQ9H832 354 aaPredicted RBP15.32■□□□□ 0.04
COMMD4-210ENST00000564587 KCNK12Q9HB15 430 aa15.32■□□□□ 0.04
COMMD4-210ENST00000564587 PFDN4Q9NQP4 134 aa15.32■□□□□ 0.04
COMMD4-210ENST00000564587 ZDHHC2Q9UIJ5 367 aa15.32■□□□□ 0.04
COMMD4-210ENST00000564587 ITM2BQ9Y287 266 aa15.32■□□□□ 0.04
COMMD4-210ENST00000564587 MTF2Q9Y483 593 aaPredicted RBP15.32■□□□□ 0.04
COMMD4-210ENST00000564587 PIAS3Q9Y6X2 628 aa15.32■□□□□ 0.04
COMMD4-210ENST00000564587 LAMA2P24043 3122 aaKnown RBP15.32■□□□□ 0.04
COMMD4-210ENST00000564587 PRUNE2Q8WUY3 3088 aa15.31■□□□□ 0.04
COMMD4-210ENST00000564587 FADS2P1A8MWK0 482 aa15.31■□□□□ 0.04
COMMD4-210ENST00000564587 GIPC1O14908 333 aa15.31■□□□□ 0.04
COMMD4-210ENST00000564587 MID1O15344 667 aa15.31■□□□□ 0.04
COMMD4-210ENST00000564587 MMP20O60882 483 aa15.31■□□□□ 0.04
COMMD4-210ENST00000564587 ATG13O75143 517 aa15.31■□□□□ 0.04
COMMD4-210ENST00000564587 TM7SF2O76062 418 aa15.31■□□□□ 0.04
COMMD4-210ENST00000564587 UNC5CO95185 931 aa15.31■□□□□ 0.04
COMMD4-210ENST00000564587 RPS17P08708 135 aaKnown RBP15.31■□□□□ 0.04
COMMD4-210ENST00000564587 VCLP18206 1134 aa15.31■□□□□ 0.04
COMMD4-210ENST00000564587 TEAD1P28347 426 aa15.31■□□□□ 0.04
COMMD4-210ENST00000564587 RPS14P62263 151 aaKnown RBP15.31■□□□□ 0.04
COMMD4-210ENST00000564587 CDKL1Q00532 357 aa15.31■□□□□ 0.04
COMMD4-210ENST00000564587 PLOD1Q02809 727 aaPredicted RBP15.31■□□□□ 0.04
COMMD4-210ENST00000564587 TMEM115Q12893 351 aaPredicted RBP15.31■□□□□ 0.04
COMMD4-210ENST00000564587 CDC16Q13042 620 aa15.31■□□□□ 0.04
COMMD4-210ENST00000564587 LCP2Q13094 533 aa15.31■□□□□ 0.04
COMMD4-210ENST00000564587 GTF2H3Q13889 308 aa15.31■□□□□ 0.04
COMMD4-210ENST00000564587 PCBP2Q15366 365 aaKnown RBP eCLIP15.31■□□□□ 0.041e-11■■■■■ 48
COMMD4-210ENST00000564587 ACSBG2Q5FVE4 666 aa15.31■□□□□ 0.04
COMMD4-210ENST00000564587 SH2D4BQ5SQS7 431 aa15.31■□□□□ 0.04
COMMD4-210ENST00000564587 SULT1C3Q6IMI6 304 aa15.31■□□□□ 0.04
COMMD4-210ENST00000564587 CYHR1Q6ZMK1 362 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms