RNA–Protein interactions for RNA: ENST00000564578.5

KARS-204, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5

Gene KARS, Length 1,942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-204ENST00000564578 LRP8Q14114 963 aa12.27□□□□□ -0.44
KARS-204ENST00000564578 PLA2G4EQ3MJ16 856 aa12.27□□□□□ -0.44
KARS-204ENST00000564578 STPG1Q5TH74 334 aa12.27□□□□□ -0.44
KARS-204ENST00000564578 ZNF549Q6P9A3 640 aa12.27□□□□□ -0.44
KARS-204ENST00000564578 CNSTQ6PJW8 725 aa12.27□□□□□ -0.44
KARS-204ENST00000564578 CEP128Q6ZU80 1094 aa12.27□□□□□ -0.44
KARS-204ENST00000564578 SFTPA2Q8IWL1 248 aa12.27□□□□□ -0.44
KARS-204ENST00000564578 OTUD6BQ8N6M0 293 aa12.27□□□□□ -0.44
KARS-204ENST00000564578 SCG3Q8WXD2 468 aaKnown RBP12.27□□□□□ -0.44
KARS-204ENST00000564578 LINC00615Q96LM1 132 aaPredicted RBP12.27□□□□□ -0.44
KARS-204ENST00000564578 FBXO6Q9NRD1 293 aaPredicted RBP12.27□□□□□ -0.44
KARS-204ENST00000564578 INTS10Q9NVR2 710 aaKnown RBP12.27□□□□□ -0.44
KARS-204ENST00000564578 BTBD3Q9Y2F9 522 aa12.27□□□□□ -0.44
KARS-204ENST00000564578 CSNK1G3Q9Y6M4 447 aa12.27□□□□□ -0.44
KARS-204ENST00000564578 CNOT1A5YKK6 2376 aaKnown RBP12.27□□□□□ -0.45
KARS-204ENST00000564578 FAM159BA6NKW6 160 aa12.27□□□□□ -0.45
KARS-204ENST00000564578 IQCF5A8MTL0 148 aa12.27□□□□□ -0.45
KARS-204ENST00000564578 AP2A2O94973 939 aa12.27□□□□□ -0.45
KARS-204ENST00000564578 PPARGP37231 505 aaPredicted RBP12.27□□□□□ -0.45
KARS-204ENST00000564578 PLA2G5P39877 138 aa12.27□□□□□ -0.45
KARS-204ENST00000564578 SLC14A1Q13336 389 aa12.27□□□□□ -0.45
KARS-204ENST00000564578 GTF2H3Q13889 308 aa12.27□□□□□ -0.45
KARS-204ENST00000564578 SLMAPQ14BN4 828 aa12.27□□□□□ -0.45
KARS-204ENST00000564578 ELOCQ15369 112 aa12.27□□□□□ -0.45
KARS-204ENST00000564578 CTSL3PQ5NE16 218 aa12.27□□□□□ -0.45
KARS-204ENST00000564578 ZNF449Q6P9G9 518 aa12.27□□□□□ -0.45
KARS-204ENST00000564578 LILRA3Q8N6C8 439 aaPredicted RBP12.27□□□□□ -0.45
KARS-204ENST00000564578 FBF1Q8TES7 1133 aa12.27□□□□□ -0.45
KARS-204ENST00000564578 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.27□□□□□ -0.45
KARS-204ENST00000564578 TIMM29Q9BSF4 260 aa12.27□□□□□ -0.45
KARS-204ENST00000564578 MCMBPQ9BTE3 642 aa12.27□□□□□ -0.45
KARS-204ENST00000564578 EPB41L4BQ9H329 900 aa12.27□□□□□ -0.45
KARS-204ENST00000564578 SPATS2LQ9NUQ6 558 aaKnown RBP12.27□□□□□ -0.45
KARS-204ENST00000564578 RAB21Q9UL25 225 aa12.27□□□□□ -0.45
KARS-204ENST00000564578 KCNK6Q9Y257 313 aa12.27□□□□□ -0.45
KARS-204ENST00000564578 MED16Q9Y2X0 877 aa12.27□□□□□ -0.45
KARS-204ENST00000564578 PCDHGB2Q9Y5G2 931 aa12.27□□□□□ -0.45
KARS-204ENST00000564578 UBA6A0AVT1 1052 aaPredicted RBP12.26□□□□□ -0.45
KARS-204ENST00000564578 TRIM38O00635 465 aa12.26□□□□□ -0.45
KARS-204ENST00000564578 SPAG6O75602 509 aa12.26□□□□□ -0.45
KARS-204ENST00000564578 ACSL3O95573 720 aa12.26□□□□□ -0.45
KARS-204ENST00000564578 EML2O95834 649 aa12.26□□□□□ -0.45
KARS-204ENST00000564578 RPS3P23396 243 aaKnown RBP eCLIP12.26□□□□□ -0.451e-6■■□□□ 13.8
KARS-204ENST00000564578 ILF3Q12906 894 aaKnown RBP eCLIP12.26□□□□□ -0.45
KARS-204ENST00000564578 DEFB133Q30KQ1 61 aa12.26□□□□□ -0.45
KARS-204ENST00000564578 KBTBD12Q3ZCT8 623 aa12.26□□□□□ -0.45
KARS-204ENST00000564578 RNF187Q5TA31 235 aaPredicted RBP12.26□□□□□ -0.45
KARS-204ENST00000564578 SLC30A9Q6PML9 568 aa12.26□□□□□ -0.45
KARS-204ENST00000564578 FAM83HQ6ZRV2 1179 aaPredicted RBP12.26□□□□□ -0.45
KARS-204ENST00000564578 KIAA0408Q6ZU52 694 aa12.26□□□□□ -0.45
KARS-204ENST00000564578 GALNT7Q86SF2 657 aa12.26□□□□□ -0.45
KARS-204ENST00000564578 AMZ2Q86W34 360 aa12.26□□□□□ -0.45
KARS-204ENST00000564578 SDR16C5Q8N3Y7 309 aa12.26□□□□□ -0.45
KARS-204ENST00000564578 FSTL5Q8N475 847 aaPredicted RBP12.26□□□□□ -0.45
KARS-204ENST00000564578 OR2L2Q8NH16 312 aa12.26□□□□□ -0.45
KARS-204ENST00000564578 LKAAEAR1Q8TD35 194 aa12.26□□□□□ -0.45
KARS-204ENST00000564578 FUT8Q9BYC5 575 aa12.26□□□□□ -0.45
KARS-204ENST00000564578 VPS37BQ9H9H4 285 aa12.26□□□□□ -0.45
KARS-204ENST00000564578 KLC4Q9NSK0 619 aa12.26□□□□□ -0.45
KARS-204ENST00000564578 ZFATQ9P243 1243 aa12.26□□□□□ -0.45
KARS-204ENST00000564578 TBC1D29Q9UFV1 150 aa12.26□□□□□ -0.45
KARS-204ENST00000564578 RABGEF1Q9UJ41 708 aa12.26□□□□□ -0.45
KARS-204ENST00000564578 DNAJC16Q9Y2G8 782 aa12.26□□□□□ -0.45
KARS-204ENST00000564578 DNMT3AQ9Y6K1 912 aaPredicted RBP12.26□□□□□ -0.45
KARS-204ENST00000564578 A6NCN8 305 aa12.25□□□□□ -0.45
KARS-204ENST00000564578 NEMP2A6NFY4 417 aa12.25□□□□□ -0.45
KARS-204ENST00000564578 TPP1O14773 563 aa12.25□□□□□ -0.45
KARS-204ENST00000564578 FFAR2O15552 330 aa12.25□□□□□ -0.45
KARS-204ENST00000564578 FMO4P31512 558 aa12.25□□□□□ -0.45
KARS-204ENST00000564578 ACTR1BP42025 376 aa12.25□□□□□ -0.45
KARS-204ENST00000564578 ABCG1P45844 678 aa12.25□□□□□ -0.45
KARS-204ENST00000564578 LIMK1P53667 647 aa12.25□□□□□ -0.45
KARS-204ENST00000564578 EIF3BP55884 814 aaKnown RBP12.25□□□□□ -0.45
KARS-204ENST00000564578 ACTR1AP61163 376 aa12.25□□□□□ -0.45
KARS-204ENST00000564578 ARHGAP8P85298 464 aa12.25□□□□□ -0.45
KARS-204ENST00000564578 DMPKQ09013 629 aa12.25□□□□□ -0.45
KARS-204ENST00000564578 NFE2L1Q14494 772 aa12.25□□□□□ -0.45
KARS-204ENST00000564578 INSCQ1MX18 579 aa12.25□□□□□ -0.45
KARS-204ENST00000564578 UAP1L1Q3KQV9 507 aa12.25□□□□□ -0.45
KARS-204ENST00000564578 TAF8Q7Z7C8 310 aa12.25□□□□□ -0.45
KARS-204ENST00000564578 ALYREFQ86V81 257 aaKnown RBP12.25□□□□□ -0.45
KARS-204ENST00000564578 SPNS2Q8IVW8 549 aa12.25□□□□□ -0.45
KARS-204ENST00000564578 FAM122AQ96E09 287 aa12.25□□□□□ -0.45
KARS-204ENST00000564578 TAAR2Q9P1P5 351 aa12.25□□□□□ -0.45
KARS-204ENST00000564578 PCNX2A6NKB5 2137 aa12.25□□□□□ -0.45
KARS-204ENST00000564578 C17orf113A0A1B0GUU1 675 aa12.25□□□□□ -0.45
KARS-204ENST00000564578 MGAT4DA6NG13 374 aa12.25□□□□□ -0.45
KARS-204ENST00000564578 TM4SF5O14894 197 aa12.25□□□□□ -0.45
KARS-204ENST00000564578 SH3BP5O60239 455 aa12.25□□□□□ -0.45
KARS-204ENST00000564578 ESR1P03372 595 aa12.25□□□□□ -0.45
KARS-204ENST00000564578 OR56A5P0C7T3 313 aa12.25□□□□□ -0.45
KARS-204ENST00000564578 BRAFP15056 766 aa12.25□□□□□ -0.45
KARS-204ENST00000564578 PBLDP30039 288 aaPredicted RBP12.25□□□□□ -0.45
KARS-204ENST00000564578 CCR7P32248 378 aa12.25□□□□□ -0.45
KARS-204ENST00000564578 CLCNKAP51800 687 aa12.25□□□□□ -0.45
KARS-204ENST00000564578 PMS2P54278 862 aa12.25□□□□□ -0.45
KARS-204ENST00000564578 TIAL1Q01085 375 aaKnown RBP eCLIP12.25□□□□□ -0.45
KARS-204ENST00000564578 EFTUD2Q15029 972 aaKnown RBP eCLIP12.25□□□□□ -0.453e-6■■■■■ 41.9
KARS-204ENST00000564578 METRNLQ641Q3 311 aa12.25□□□□□ -0.45
KARS-204ENST00000564578 LVRNQ6Q4G3 990 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms