RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 GNAZP19086 355 aa4.43□□□□□ -1.7
UBR1-205ENST00000564540 PPARGP37231 505 aaPredicted RBP4.43□□□□□ -1.7
UBR1-205ENST00000564540 NR2C2P49116 596 aa4.43□□□□□ -1.7
UBR1-205ENST00000564540 MEP1AQ16819 746 aa4.43□□□□□ -1.7
UBR1-205ENST00000564540 SNX30Q5VWJ9 437 aa4.43□□□□□ -1.7
UBR1-205ENST00000564540 NOTCH2NLQ7Z3S9 236 aa4.43□□□□□ -1.7
UBR1-205ENST00000564540 KRTAP7-1Q8IUC3 87 aa4.43□□□□□ -1.7
UBR1-205ENST00000564540 CMTM3Q96MX0 182 aa4.43□□□□□ -1.7
UBR1-205ENST00000564540 NUDCD1Q96RS6 583 aa4.43□□□□□ -1.7
UBR1-205ENST00000564540 MOV10L1Q9BXT6 1211 aaKnown RBP4.43□□□□□ -1.7
UBR1-205ENST00000564540 ITPAQ9BY32 194 aa4.43□□□□□ -1.7
UBR1-205ENST00000564540 PLK3Q9H4B4 646 aa4.43□□□□□ -1.7
UBR1-205ENST00000564540 RAD21L1Q9H4I0 556 aa4.43□□□□□ -1.7
UBR1-205ENST00000564540 ZBTB20Q9HC78 741 aaPredicted RBP4.43□□□□□ -1.7
UBR1-205ENST00000564540 OLA1Q9NTK5 396 aaKnown RBP4.43□□□□□ -1.7
UBR1-205ENST00000564540 DNAJB4Q9UDY4 337 aa4.43□□□□□ -1.7
UBR1-205ENST00000564540 C2CD2Q9Y426 696 aa4.43□□□□□ -1.7
UBR1-205ENST00000564540 TDRD9Q8NDG6 1382 aaKnown RBP4.42□□□□□ -1.7
UBR1-205ENST00000564540 TEX13DA0A0J9YY54 714 aaPredicted RBP4.42□□□□□ -1.7
UBR1-205ENST00000564540 TMEM8BA6NDV4 472 aa4.42□□□□□ -1.7
UBR1-205ENST00000564540 C15orf62A8K5M9 175 aa4.42□□□□□ -1.7
UBR1-205ENST00000564540 HHLA1C9JL84 531 aa4.42□□□□□ -1.7
UBR1-205ENST00000564540 LAMP2P13473 410 aa4.42□□□□□ -1.7
UBR1-205ENST00000564540 TMEM11P17152 192 aa4.42□□□□□ -1.7
UBR1-205ENST00000564540 CDH2P19022 906 aaPredicted RBP4.42□□□□□ -1.7
UBR1-205ENST00000564540 CHMP24386 653 aa4.42□□□□□ -1.7
UBR1-205ENST00000564540 MAPK4P31152 587 aa4.42□□□□□ -1.7
UBR1-205ENST00000564540 HOXC8P31273 242 aa4.42□□□□□ -1.7
UBR1-205ENST00000564540 MAN1A1P33908 653 aa4.42□□□□□ -1.7
UBR1-205ENST00000564540 VEGFCP49767 419 aa4.42□□□□□ -1.7
UBR1-205ENST00000564540 HSD17B4P51659 736 aa4.42□□□□□ -1.7
UBR1-205ENST00000564540 PMP22Q01453 160 aa4.42□□□□□ -1.7
UBR1-205ENST00000564540 PCGF3Q3KNV8 242 aa4.42□□□□□ -1.7
UBR1-205ENST00000564540 ASPRV1Q53RT3 343 aa4.42□□□□□ -1.7
UBR1-205ENST00000564540 KIAA0930Q6ICG6 404 aaPredicted RBP4.42□□□□□ -1.7
UBR1-205ENST00000564540 JADE1Q6IE81 842 aa4.42□□□□□ -1.7
UBR1-205ENST00000564540 CCDC70Q6NSX1 233 aa4.42□□□□□ -1.7
UBR1-205ENST00000564540 KLHL35Q6PF15 583 aa4.42□□□□□ -1.7
UBR1-205ENST00000564540 IKBIPQ70UQ0 350 aa4.42□□□□□ -1.7
UBR1-205ENST00000564540 GALNT13Q8IUC8 556 aa4.42□□□□□ -1.7
UBR1-205ENST00000564540 HACE1Q8IYU2 909 aa4.42□□□□□ -1.7
UBR1-205ENST00000564540 ADAD2Q8NCV1 583 aaKnown RBP4.42□□□□□ -1.7
UBR1-205ENST00000564540 ZNF248Q8NDW4 579 aa4.42□□□□□ -1.7
UBR1-205ENST00000564540 SMPDL3BQ92485 455 aa4.42□□□□□ -1.7
UBR1-205ENST00000564540 SEMA4DQ92854 862 aa4.42□□□□□ -1.7
UBR1-205ENST00000564540 WBP1Q96G27 269 aa4.42□□□□□ -1.7
UBR1-205ENST00000564540 LRR1Q96L50 414 aa4.42□□□□□ -1.7
UBR1-205ENST00000564540 SH2D4AQ9H788 454 aa4.42□□□□□ -1.7
UBR1-205ENST00000564540 PELI2Q9HAT8 420 aa4.42□□□□□ -1.7
UBR1-205ENST00000564540 TRMT1Q9NXH9 659 aaKnown RBP4.42□□□□□ -1.7
UBR1-205ENST00000564540 FLT1P17948 1338 aa4.42□□□□□ -1.7
UBR1-205ENST00000564540 A0A0G2JLW4 131 aa4.41□□□□□ -1.7
UBR1-205ENST00000564540 FRMD3A2A2Y4 597 aa4.41□□□□□ -1.7
UBR1-205ENST00000564540 A8MZ25 164 aa4.41□□□□□ -1.7
UBR1-205ENST00000564540 SLC22A2O15244 555 aa4.41□□□□□ -1.7
UBR1-205ENST00000564540 GPC4O75487 556 aa4.41□□□□□ -1.7
UBR1-205ENST00000564540 OR2C1O95371 312 aa4.41□□□□□ -1.7
UBR1-205ENST00000564540 IGHV4-38-2P0DP08 117 aa4.41□□□□□ -1.7
UBR1-205ENST00000564540 GNB3P16520 340 aa4.41□□□□□ -1.7
UBR1-205ENST00000564540 CAMPP49913 170 aa4.41□□□□□ -1.7
UBR1-205ENST00000564540 PPP2R2BQ00005 443 aa4.41□□□□□ -1.7
UBR1-205ENST00000564540 IKQ13123 557 aaPredicted RBP4.41□□□□□ -1.7
UBR1-205ENST00000564540 ZDHHC20Q5W0Z9 365 aa4.41□□□□□ -1.7
UBR1-205ENST00000564540 TPRG1Q6ZUI0 275 aa4.41□□□□□ -1.7
UBR1-205ENST00000564540 WDTC1Q8N5D0 677 aa4.41□□□□□ -1.7
UBR1-205ENST00000564540 POMGNT1Q8WZA1 660 aa4.41□□□□□ -1.7
UBR1-205ENST00000564540 KAT14Q9H8E8 782 aa4.41□□□□□ -1.7
UBR1-205ENST00000564540 PAG1Q9NWQ8 432 aa4.41□□□□□ -1.7
UBR1-205ENST00000564540 ADPRHL2Q9NX46 363 aa4.41□□□□□ -1.7
UBR1-205ENST00000564540 RUSC2Q8N2Y8 1516 aa4.41□□□□□ -1.7
UBR1-205ENST00000564540 MYO1GB0I1T2 1018 aa4.4□□□□□ -1.71
UBR1-205ENST00000564540 PLOD2O00469 737 aa4.4□□□□□ -1.71
UBR1-205ENST00000564540 HS6ST1O60243 411 aa4.4□□□□□ -1.71
UBR1-205ENST00000564540 TMCC2O75069 709 aa4.4□□□□□ -1.71
UBR1-205ENST00000564540 SRPRAP08240 638 aaKnown RBP4.4□□□□□ -1.71
UBR1-205ENST00000564540 ACTN1P12814 892 aa4.4□□□□□ -1.71
UBR1-205ENST00000564540 CBLP22681 906 aa4.4□□□□□ -1.71
UBR1-205ENST00000564540 EPHA2P29317 976 aa4.4□□□□□ -1.71
UBR1-205ENST00000564540 ARL3P36405 182 aa4.4□□□□□ -1.71
UBR1-205ENST00000564540 MAP2K2P36507 400 aa4.4□□□□□ -1.71
UBR1-205ENST00000564540 THOP1P52888 689 aa4.4□□□□□ -1.71
UBR1-205ENST00000564540 DRG2P55039 364 aaKnown RBP4.4□□□□□ -1.71
UBR1-205ENST00000564540 SETQ01105 290 aaPredicted RBP4.4□□□□□ -1.71
UBR1-205ENST00000564540 PRKAA1Q13131 559 aa4.4□□□□□ -1.71
UBR1-205ENST00000564540 RARS2Q5T160 578 aaKnown RBP4.4□□□□□ -1.71
UBR1-205ENST00000564540 SARM1Q6SZW1 724 aa4.4□□□□□ -1.71
UBR1-205ENST00000564540 ZNF843Q8N446 348 aa4.4□□□□□ -1.71
UBR1-205ENST00000564540 TMEM190Q8WZ59 177 aa4.4□□□□□ -1.71
UBR1-205ENST00000564540 USP6NLQ92738 828 aa4.4□□□□□ -1.71
UBR1-205ENST00000564540 DDOQ99489 341 aa4.4□□□□□ -1.71
UBR1-205ENST00000564540 NCAPGQ9BPX3 1015 aa4.4□□□□□ -1.71
UBR1-205ENST00000564540 HGH1Q9BTY7 390 aa4.4□□□□□ -1.71
UBR1-205ENST00000564540 EGLN1Q9GZT9 426 aa4.4□□□□□ -1.71
UBR1-205ENST00000564540 KRT84Q9NSB2 600 aa4.4□□□□□ -1.71
UBR1-205ENST00000564540 SMC4Q9NTJ3 1288 aa4.4□□□□□ -1.71
UBR1-205ENST00000564540 CMAHPQ9Y471 501 aa4.4□□□□□ -1.71
UBR1-205ENST00000564540 SESN1Q9Y6P5 492 aa4.4□□□□□ -1.71
UBR1-205ENST00000564540 NOTCH3Q9UM47 2321 aa4.39□□□□□ -1.71
UBR1-205ENST00000564540 A0A1B0GU03 582 aa4.39□□□□□ -1.71
UBR1-205ENST00000564540 SERINC4A6NH21 518 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms