RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 ZCCHC2Q9C0B9 1178 aaKnown RBP18.28■□□□□ 0.52
NME3-204ENST00000563498 AKIRIN1Q9H9L7 192 aaPredicted RBP18.28■□□□□ 0.52
NME3-204ENST00000563498 FGF21Q9NSA1 209 aa18.28■□□□□ 0.52
NME3-204ENST00000563498 CAPN11Q9UMQ6 739 aa18.28■□□□□ 0.52
NME3-204ENST00000563498 SPO11Q9Y5K1 396 aa18.28■□□□□ 0.52
NME3-204ENST00000563498 TLCD2A6NGC4 264 aa18.27■□□□□ 0.52
NME3-204ENST00000563498 AURKAO14965 403 aa18.27■□□□□ 0.52
NME3-204ENST00000563498 PPP1R12AO14974 1030 aaPredicted RBP18.27■□□□□ 0.52
NME3-204ENST00000563498 CPNE3O75131 537 aaKnown RBP18.27■□□□□ 0.52
NME3-204ENST00000563498 SORBS2O94875 1100 aaKnown RBP18.27■□□□□ 0.52
NME3-204ENST00000563498 H2AFZP0C0S5 128 aa18.27■□□□□ 0.52
NME3-204ENST00000563498 EBLN1P0CF75 366 aa18.27■□□□□ 0.52
NME3-204ENST00000563498 ARL4DP49703 201 aa18.27■□□□□ 0.52
NME3-204ENST00000563498 HSD11B2P80365 405 aa18.27■□□□□ 0.52
NME3-204ENST00000563498 RPE65Q16518 533 aa18.27■□□□□ 0.52
NME3-204ENST00000563498 FAM199XQ6PEV8 388 aaPredicted RBP18.27■□□□□ 0.52
NME3-204ENST00000563498 H2AFVQ71UI9 128 aa18.27■□□□□ 0.52
NME3-204ENST00000563498 D2HGDHQ8N465 521 aa18.27■□□□□ 0.52
NME3-204ENST00000563498 GPR150Q8NGU9 434 aa18.27■□□□□ 0.52
NME3-204ENST00000563498 OR8K5Q8NH50 307 aa18.27■□□□□ 0.52
NME3-204ENST00000563498 GDAP1Q8TB36 358 aa18.27■□□□□ 0.52
NME3-204ENST00000563498 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.27■□□□□ 0.52
NME3-204ENST00000563498 SSC4DQ8WTU2 575 aa18.27■□□□□ 0.52
NME3-204ENST00000563498 CTNNBL1Q8WYA6 563 aaPredicted RBP18.27■□□□□ 0.52
NME3-204ENST00000563498 MAP3K3Q99759 626 aa18.27■□□□□ 0.52
NME3-204ENST00000563498 TRABDQ9H4I3 376 aa18.27■□□□□ 0.52
NME3-204ENST00000563498 CUEDC1Q9NWM3 386 aaPredicted RBP18.27■□□□□ 0.52
NME3-204ENST00000563498 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.27■□□□□ 0.52
NME3-204ENST00000563498 TMEM63CQ9P1W3 806 aa18.27■□□□□ 0.52
NME3-204ENST00000563498 MAP4K5Q9Y4K4 846 aa18.27■□□□□ 0.52
NME3-204ENST00000563498 PCDHGB7Q9Y5F8 929 aa18.27■□□□□ 0.52
NME3-204ENST00000563498 DNMT3AQ9Y6K1 912 aaPredicted RBP18.27■□□□□ 0.52
NME3-204ENST00000563498 NBPF19A0A087WUL8 3843 aa18.27■□□□□ 0.51
NME3-204ENST00000563498 ICE1Q9Y2F5 2266 aa18.26■□□□□ 0.51
NME3-204ENST00000563498 LRRD1A4D1F6 860 aa18.26■□□□□ 0.51
NME3-204ENST00000563498 OR5K3A6NET4 321 aa18.26■□□□□ 0.51
NME3-204ENST00000563498 APOL1O14791 398 aa18.26■□□□□ 0.51
NME3-204ENST00000563498 POP7O75817 140 aaKnown RBP18.26■□□□□ 0.51
NME3-204ENST00000563498 MT-CYBP00156 380 aaPredicted RBP18.26■□□□□ 0.51
NME3-204ENST00000563498 LPOP22079 712 aaPredicted RBP18.26■□□□□ 0.51
NME3-204ENST00000563498 RPS18P62269 152 aaKnown RBP18.26■□□□□ 0.51
NME3-204ENST00000563498 TUBB4BP68371 445 aa18.26■□□□□ 0.51
NME3-204ENST00000563498 TUBB2AQ13885 445 aa18.26■□□□□ 0.51
NME3-204ENST00000563498 IQCB1Q15051 598 aa18.26■□□□□ 0.51
NME3-204ENST00000563498 NADK2Q4G0N4 442 aa18.26■□□□□ 0.51
NME3-204ENST00000563498 DNTTIP2Q5QJE6 756 aaKnown RBP18.26■□□□□ 0.51
NME3-204ENST00000563498 IZUMO3Q5VZ72 239 aa18.26■□□□□ 0.51
NME3-204ENST00000563498 CPZQ66K79 652 aa18.26■□□□□ 0.51
NME3-204ENST00000563498 CARFQ8N187 725 aa18.26■□□□□ 0.51
NME3-204ENST00000563498 SPATA22Q8NHS9 363 aa18.26■□□□□ 0.51
NME3-204ENST00000563498 TUBB2BQ9BVA1 445 aa18.26■□□□□ 0.51
NME3-204ENST00000563498 ING2Q9H160 280 aa18.26■□□□□ 0.51
NME3-204ENST00000563498 GLOD4Q9HC38 313 aa18.26■□□□□ 0.51
NME3-204ENST00000563498 BPIFA1Q9NP55 256 aa18.26■□□□□ 0.51
NME3-204ENST00000563498 IL26Q9NPH9 171 aa18.26■□□□□ 0.51
NME3-204ENST00000563498 ACSS2Q9NR19 701 aa18.26■□□□□ 0.51
NME3-204ENST00000563498 FARSAQ9Y285 508 aaKnown RBP18.26■□□□□ 0.51
NME3-204ENST00000563498 LUC7L2Q9Y383 392 aaKnown RBP18.26■□□□□ 0.51
NME3-204ENST00000563498 NOTCH2Q04721 2471 aa18.26■□□□□ 0.51
NME3-204ENST00000563498 A0A0A6YYK5 440 aaPredicted RBP18.25■□□□□ 0.51
NME3-204ENST00000563498 C3orf70A6NLC5 250 aaPredicted RBP18.25■□□□□ 0.51
NME3-204ENST00000563498 SCRG1O75711 98 aa18.25■□□□□ 0.51
NME3-204ENST00000563498 ZFXP17010 805 aaPredicted RBP18.25■□□□□ 0.51
NME3-204ENST00000563498 IL10RAQ13651 578 aa18.25■□□□□ 0.51
NME3-204ENST00000563498 PLCL1Q15111 1095 aa18.25■□□□□ 0.51
NME3-204ENST00000563498 TEX44Q53QW1 395 aa18.25■□□□□ 0.51
NME3-204ENST00000563498 LDLRAP1Q5SW96 308 aa18.25■□□□□ 0.51
NME3-204ENST00000563498 RASGEF1AQ8N9B8 481 aa18.25■□□□□ 0.51
NME3-204ENST00000563498 DDHD1Q8NEL9 900 aa18.25■□□□□ 0.51
NME3-204ENST00000563498 ZFPM2Q8WW38 1151 aa18.25■□□□□ 0.51
NME3-204ENST00000563498 LRFN5Q96NI6 719 aa18.25■□□□□ 0.51
NME3-204ENST00000563498 MAK16Q9BXY0 300 aaKnown RBP18.25■□□□□ 0.51
NME3-204ENST00000563498 LATS2Q9NRM7 1088 aa18.25■□□□□ 0.51
NME3-204ENST00000563498 KCND1Q9NSA2 647 aa18.25■□□□□ 0.51
NME3-204ENST00000563498 RP1L1Q8IWN7 2480 aaPredicted RBP18.25■□□□□ 0.51
NME3-204ENST00000563498 LOC285095A0A1B0GVY8 99 aa18.24■□□□□ 0.51
NME3-204ENST00000563498 UBA6A0AVT1 1052 aaPredicted RBP18.24■□□□□ 0.51
NME3-204ENST00000563498 ARGFXA6NJG6 315 aa18.24■□□□□ 0.51
NME3-204ENST00000563498 PMPCBO75439 489 aa18.24■□□□□ 0.51
NME3-204ENST00000563498 CEACAM4O75871 244 aa18.24■□□□□ 0.51
NME3-204ENST00000563498 ZBTB11O95625 1053 aaPredicted RBP18.24■□□□□ 0.51
NME3-204ENST00000563498 EPOP01588 193 aa18.24■□□□□ 0.51
NME3-204ENST00000563498 MTHFD1P11586 935 aaKnown RBP18.24■□□□□ 0.51
NME3-204ENST00000563498 SPAM1P38567 509 aa18.24■□□□□ 0.51
NME3-204ENST00000563498 CCL11P51671 97 aa18.24■□□□□ 0.51
NME3-204ENST00000563498 CTSCP53634 463 aa18.24■□□□□ 0.51
NME3-204ENST00000563498 CHRNA6Q15825 494 aa18.24■□□□□ 0.51
NME3-204ENST00000563498 FAM182AQ5T1J6 154 aa18.24■□□□□ 0.51
NME3-204ENST00000563498 CERS6Q6ZMG9 384 aa18.24■□□□□ 0.51
NME3-204ENST00000563498 FAM83HQ6ZRV2 1179 aaPredicted RBP18.24■□□□□ 0.51
NME3-204ENST00000563498 HPS6Q86YV9 775 aa18.24■□□□□ 0.51
NME3-204ENST00000563498 TMEM126BQ8IUX1 230 aa18.24■□□□□ 0.51
NME3-204ENST00000563498 TTC30BQ8N4P2 665 aa18.24■□□□□ 0.51
NME3-204ENST00000563498 ADAMTS17Q8TE56 1095 aa18.24■□□□□ 0.51
NME3-204ENST00000563498 CPLX3Q8WVH0 158 aa18.24■□□□□ 0.51
NME3-204ENST00000563498 MR1Q95460 341 aa18.24■□□□□ 0.51
NME3-204ENST00000563498 ZNF501Q96CX3 271 aaPredicted RBP18.24■□□□□ 0.51
NME3-204ENST00000563498 TEKT5Q96M29 485 aa18.24■□□□□ 0.51
NME3-204ENST00000563498 HRASLS2Q9NWW9 162 aa18.24■□□□□ 0.51
NME3-204ENST00000563498 PSMD13Q9UNM6 376 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms