RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 CREG1O75629 220 aa16.45■□□□□ 0.22
HDGFL3-203ENST00000563404 POP7O75817 140 aaKnown RBP16.45■□□□□ 0.22
HDGFL3-203ENST00000563404 DNAJB5O75953 348 aa16.45■□□□□ 0.22
HDGFL3-203ENST00000563404 PECAM1P16284 738 aaPredicted RBP16.45■□□□□ 0.22
HDGFL3-203ENST00000563404 ZFXP17010 805 aaPredicted RBP16.45■□□□□ 0.22
HDGFL3-203ENST00000563404 NFKB1P19838 968 aa16.45■□□□□ 0.22
HDGFL3-203ENST00000563404 FECHP22830 423 aa16.45■□□□□ 0.22
HDGFL3-203ENST00000563404 ARHGAP25P42331 645 aa16.45■□□□□ 0.22
HDGFL3-203ENST00000563404 CD97P48960 835 aa16.45■□□□□ 0.22
HDGFL3-203ENST00000563404 MLLT10P55197 1068 aa16.45■□□□□ 0.22
HDGFL3-203ENST00000563404 WNT3AP56704 352 aa16.45■□□□□ 0.22
HDGFL3-203ENST00000563404 ADCY2Q08462 1091 aa16.45■□□□□ 0.22
HDGFL3-203ENST00000563404 DMPKQ09013 629 aa16.45■□□□□ 0.22
HDGFL3-203ENST00000563404 CHRNA6Q15825 494 aa16.45■□□□□ 0.22
HDGFL3-203ENST00000563404 RPE65Q16518 533 aa16.45■□□□□ 0.22
HDGFL3-203ENST00000563404 SIRPB2Q5JXA9 342 aa16.45■□□□□ 0.22
HDGFL3-203ENST00000563404 LRRC38Q5VT99 294 aa16.45■□□□□ 0.22
HDGFL3-203ENST00000563404 MRGPRX2Q96LB1 330 aa16.45■□□□□ 0.22
HDGFL3-203ENST00000563404 CHP1Q99653 195 aa16.45■□□□□ 0.22
HDGFL3-203ENST00000563404 TWSG1Q9GZX9 223 aa16.45■□□□□ 0.22
HDGFL3-203ENST00000563404 SPTLC3Q9NUV7 552 aa16.45■□□□□ 0.22
HDGFL3-203ENST00000563404 IL17CQ9P0M4 197 aa16.45■□□□□ 0.22
HDGFL3-203ENST00000563404 FAM153AQ9UHL3 310 aa16.45■□□□□ 0.22
HDGFL3-203ENST00000563404 KCND3Q9UK17 655 aa16.45■□□□□ 0.22
HDGFL3-203ENST00000563404 PSMD13Q9UNM6 376 aa16.45■□□□□ 0.22
HDGFL3-203ENST00000563404 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.45■□□□□ 0.22
HDGFL3-203ENST00000563404 USP9YO00507 2555 aaPredicted RBP16.45■□□□□ 0.22
HDGFL3-203ENST00000563404 PIPSLA2A3N6 862 aa16.44■□□□□ 0.22
HDGFL3-203ENST00000563404 F5H423 210 aaPredicted RBP16.44■□□□□ 0.22
HDGFL3-203ENST00000563404 BUD23O43709 281 aaKnown RBP16.44■□□□□ 0.22
HDGFL3-203ENST00000563404 CCNYL3P0C7X3 344 aa16.44■□□□□ 0.22
HDGFL3-203ENST00000563404 EBLN1P0CF75 366 aa16.44■□□□□ 0.22
HDGFL3-203ENST00000563404 TNNT1P13805 278 aa16.44■□□□□ 0.22
HDGFL3-203ENST00000563404 CDKN2BP42772 138 aa16.44■□□□□ 0.22
HDGFL3-203ENST00000563404 PMS2P54278 862 aa16.44■□□□□ 0.22
HDGFL3-203ENST00000563404 TUBB3Q13509 450 aa16.44■□□□□ 0.22
HDGFL3-203ENST00000563404 LAMB3Q13751 1172 aa16.44■□□□□ 0.22
HDGFL3-203ENST00000563404 GTF2H3Q13889 308 aa16.44■□□□□ 0.22
HDGFL3-203ENST00000563404 NFE2L1Q14494 772 aa16.44■□□□□ 0.22
HDGFL3-203ENST00000563404 LLGL1Q15334 1064 aa16.44■□□□□ 0.22
HDGFL3-203ENST00000563404 TAZQ16635 292 aa16.44■□□□□ 0.22
HDGFL3-203ENST00000563404 CCDC70Q6NSX1 233 aa16.44■□□□□ 0.22
HDGFL3-203ENST00000563404 FAM199XQ6PEV8 388 aaPredicted RBP16.44■□□□□ 0.22
HDGFL3-203ENST00000563404 FAM151BQ6UXP7 276 aa16.44■□□□□ 0.22
HDGFL3-203ENST00000563404 ASB18Q6ZVZ8 466 aa16.44■□□□□ 0.22
HDGFL3-203ENST00000563404 AMZ2Q86W34 360 aa16.44■□□□□ 0.22
HDGFL3-203ENST00000563404 SLC25A41Q8N5S1 370 aa16.44■□□□□ 0.22
HDGFL3-203ENST00000563404 OR8K1Q8NGG5 319 aa16.44■□□□□ 0.22
HDGFL3-203ENST00000563404 DTX3LQ8TDB6 740 aa16.44■□□□□ 0.22
HDGFL3-203ENST00000563404 BRSK1Q8TDC3 778 aa16.44■□□□□ 0.22
HDGFL3-203ENST00000563404 OXNAD1Q96HP4 312 aaPredicted RBP16.44■□□□□ 0.22
HDGFL3-203ENST00000563404 SRPK1Q96SB4 655 aaKnown RBP16.44■□□□□ 0.22
HDGFL3-203ENST00000563404 MAP3K3Q99759 626 aa16.44■□□□□ 0.22
HDGFL3-203ENST00000563404 TRIM55Q9BYV6 548 aa16.44■□□□□ 0.22
HDGFL3-203ENST00000563404 DEF6Q9H4E7 631 aa16.44■□□□□ 0.22
HDGFL3-203ENST00000563404 ACTL8Q9H568 366 aa16.44■□□□□ 0.22
HDGFL3-203ENST00000563404 OR2AG2A6NM03 316 aa16.43■□□□□ 0.22
HDGFL3-203ENST00000563404 GOLGA6L19H0YKK7 550 aa16.43■□□□□ 0.22
HDGFL3-203ENST00000563404 AKR1B10O60218 316 aa16.43■□□□□ 0.22
HDGFL3-203ENST00000563404 KCNJ13O60928 360 aa16.43■□□□□ 0.22
HDGFL3-203ENST00000563404 RFPL1O75677 317 aa16.43■□□□□ 0.22
HDGFL3-203ENST00000563404 RECKO95980 971 aa16.43■□□□□ 0.22
HDGFL3-203ENST00000563404 NTRK1P04629 796 aa16.43■□□□□ 0.22
HDGFL3-203ENST00000563404 VCLP18206 1134 aa16.43■□□□□ 0.22
HDGFL3-203ENST00000563404 SPAM1P38567 509 aa16.43■□□□□ 0.22
HDGFL3-203ENST00000563404 HALP42357 657 aa16.43■□□□□ 0.22
HDGFL3-203ENST00000563404 RPS18P62269 152 aaKnown RBP16.43■□□□□ 0.22
HDGFL3-203ENST00000563404 PTPRCAPQ14761 206 aa16.43■□□□□ 0.22
HDGFL3-203ENST00000563404 GPRC6AQ5T6X5 926 aa16.43■□□□□ 0.22
HDGFL3-203ENST00000563404 TMEM220Q6QAJ8 160 aa16.43■□□□□ 0.22
HDGFL3-203ENST00000563404 FAM26EQ8N5C1 309 aa16.43■□□□□ 0.22
HDGFL3-203ENST00000563404 TEX19Q8NA77 164 aa16.43■□□□□ 0.22
HDGFL3-203ENST00000563404 SIDT2Q8NBJ9 832 aaKnown RBP16.43■□□□□ 0.22
HDGFL3-203ENST00000563404 DDHD1Q8NEL9 900 aa16.43■□□□□ 0.22
HDGFL3-203ENST00000563404 NAT14Q8WUY8 206 aa16.43■□□□□ 0.22
HDGFL3-203ENST00000563404 TFB1MQ8WVM0 346 aaKnown RBP16.43■□□□□ 0.22
HDGFL3-203ENST00000563404 UBXN4Q92575 508 aa16.43■□□□□ 0.22
HDGFL3-203ENST00000563404 TRABDQ9H4I3 376 aa16.43■□□□□ 0.22
HDGFL3-203ENST00000563404 PDE7BQ9NP56 450 aa16.43■□□□□ 0.22
HDGFL3-203ENST00000563404 RARRES3Q9UL19 164 aa16.43■□□□□ 0.22
HDGFL3-203ENST00000563404 CFAP20Q9Y6A4 193 aaKnown RBP16.43■□□□□ 0.22
HDGFL3-203ENST00000563404 C21orf140B9A014 251 aa16.42■□□□□ 0.22
HDGFL3-203ENST00000563404 CST8O60676 142 aa16.42■□□□□ 0.22
HDGFL3-203ENST00000563404 EPOP01588 193 aa16.42■□□□□ 0.22
HDGFL3-203ENST00000563404 MT-ND3P03897 115 aa16.42■□□□□ 0.22
HDGFL3-203ENST00000563404 GP1BBP13224 206 aa16.42■□□□□ 0.22
HDGFL3-203ENST00000563404 COMTP21964 271 aa16.42■□□□□ 0.22
HDGFL3-203ENST00000563404 PBLDP30039 288 aaPredicted RBP16.42■□□□□ 0.22
HDGFL3-203ENST00000563404 NR2C2P49116 596 aa16.42■□□□□ 0.22
HDGFL3-203ENST00000563404 SEMA5AQ13591 1074 aa16.42■□□□□ 0.22
HDGFL3-203ENST00000563404 SLC1A5Q15758 541 aa16.42■□□□□ 0.22
HDGFL3-203ENST00000563404 LDLRAP1Q5SW96 308 aa16.42■□□□□ 0.22
HDGFL3-203ENST00000563404 DUS1LQ6P1R4 473 aaKnown RBP16.42■□□□□ 0.22
HDGFL3-203ENST00000563404 APLFQ8IW19 511 aaPredicted RBP16.42■□□□□ 0.22
HDGFL3-203ENST00000563404 RHOT2Q8IXI1 618 aa16.42■□□□□ 0.22
HDGFL3-203ENST00000563404 RHOT1Q8IXI2 618 aa16.42■□□□□ 0.22
HDGFL3-203ENST00000563404 ZNF567Q8N184 647 aa16.42■□□□□ 0.22
HDGFL3-203ENST00000563404 BEND7Q8N7W2 519 aaPredicted RBP16.42■□□□□ 0.22
HDGFL3-203ENST00000563404 BLOC1S5Q8TDH9 187 aa16.42■□□□□ 0.22
HDGFL3-203ENST00000563404 ZNF514Q96K75 400 aaPredicted RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms