RNA–Protein interactions for RNA: ENST00000563218.5

SPG7-207, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 5

Gene SPG7, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-207ENST00000563218 LRRC66Q68CR7 880 aa13.21□□□□□ -0.29
SPG7-207ENST00000563218 TIGD7Q6NT04 549 aaPredicted RBP13.21□□□□□ -0.29
SPG7-207ENST00000563218 HIBCHQ6NVY1 386 aaPredicted RBP13.21□□□□□ -0.29
SPG7-207ENST00000563218 BORAQ6PGQ7 559 aa13.21□□□□□ -0.29
SPG7-207ENST00000563218 HDXQ7Z353 690 aa13.21□□□□□ -0.29
SPG7-207ENST00000563218 PPIL6Q8IXY8 311 aa13.21□□□□□ -0.29
SPG7-207ENST00000563218 UNC5BQ8IZJ1 945 aa13.21□□□□□ -0.29
SPG7-207ENST00000563218 CACNA2D3Q8IZS8 1091 aa13.21□□□□□ -0.29
SPG7-207ENST00000563218 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.21□□□□□ -0.29
SPG7-207ENST00000563218 CCDC110Q8TBZ0 833 aa13.21□□□□□ -0.29
SPG7-207ENST00000563218 PIH1D2Q8WWB5 315 aa13.21□□□□□ -0.29
SPG7-207ENST00000563218 SCARF2Q96GP6 870 aaPredicted RBP13.21□□□□□ -0.29
SPG7-207ENST00000563218 SPATA13Q96N96 652 aa13.21□□□□□ -0.29
SPG7-207ENST00000563218 ZNF599Q96NL3 588 aa13.21□□□□□ -0.29
SPG7-207ENST00000563218 TSGA13Q96PP4 275 aa13.21□□□□□ -0.29
SPG7-207ENST00000563218 OR2M4Q96R27 311 aa13.21□□□□□ -0.29
SPG7-207ENST00000563218 MCCC1Q96RQ3 725 aaPredicted RBP13.21□□□□□ -0.29
SPG7-207ENST00000563218 B3GNT4Q9C0J1 378 aa13.21□□□□□ -0.29
SPG7-207ENST00000563218 ZMYND15Q9H091 742 aa13.21□□□□□ -0.29
SPG7-207ENST00000563218 TSPYL1Q9H0U9 437 aa13.21□□□□□ -0.29
SPG7-207ENST00000563218 APMAPQ9HDC9 416 aa13.21□□□□□ -0.29
SPG7-207ENST00000563218 KCNK4Q9NYG8 393 aa13.21□□□□□ -0.29
SPG7-207ENST00000563218 FAM153AQ9UHL3 310 aa13.21□□□□□ -0.29
SPG7-207ENST00000563218 PRKAB1Q9Y478 270 aa13.21□□□□□ -0.29
SPG7-207ENST00000563218 OAS3Q9Y6K5 1087 aaKnown RBP13.21□□□□□ -0.29
SPG7-207ENST00000563218 LOC101059948A0A1B0GTJ6 334 aa13.2□□□□□ -0.3
SPG7-207ENST00000563218 A8MU76 341 aa13.2□□□□□ -0.3
SPG7-207ENST00000563218 PRKAR1AP10644 381 aa13.2□□□□□ -0.3
SPG7-207ENST00000563218 CSTF2P33240 577 aaKnown RBP eCLIP13.2□□□□□ -0.3
SPG7-207ENST00000563218 BIRC2Q13490 618 aa13.2□□□□□ -0.3
SPG7-207ENST00000563218 TRA2AQ13595 282 aaKnown RBP eCLIP13.2□□□□□ -0.3
SPG7-207ENST00000563218 IGFBP7Q16270 282 aa13.2□□□□□ -0.3
SPG7-207ENST00000563218 PYCR3Q53H96 274 aa13.2□□□□□ -0.3
SPG7-207ENST00000563218 ANKRD20A2Q5SQ80 823 aa13.2□□□□□ -0.3
SPG7-207ENST00000563218 RNASEH2BQ5TBB1 312 aaKnown RBP13.2□□□□□ -0.3
SPG7-207ENST00000563218 ATP1A1-AS1Q5TC04 95 aa13.2□□□□□ -0.3
SPG7-207ENST00000563218 ANKRD20A1Q5TYW2 823 aa13.2□□□□□ -0.3
SPG7-207ENST00000563218 ANKRD20A3Q5VUR7 823 aa13.2□□□□□ -0.3
SPG7-207ENST00000563218 CEP128Q6ZU80 1094 aa13.2□□□□□ -0.3
SPG7-207ENST00000563218 TIPARPQ7Z3E1 657 aaKnown RBP13.2□□□□□ -0.3
SPG7-207ENST00000563218 HOOK3Q86VS8 718 aa13.2□□□□□ -0.3
SPG7-207ENST00000563218 NRSN1Q8IZ57 195 aa13.2□□□□□ -0.3
SPG7-207ENST00000563218 TAB3Q8N5C8 712 aaPredicted RBP13.2□□□□□ -0.3
SPG7-207ENST00000563218 AGBL5Q8NDL9 886 aa13.2□□□□□ -0.3
SPG7-207ENST00000563218 AP2M1Q96CW1 435 aa13.2□□□□□ -0.3
SPG7-207ENST00000563218 SCRN2Q96FV2 425 aa13.2□□□□□ -0.3
SPG7-207ENST00000563218 VAT1Q99536 393 aa13.2□□□□□ -0.3
SPG7-207ENST00000563218 DDA1Q9BW61 102 aa13.2□□□□□ -0.3
SPG7-207ENST00000563218 CDH19Q9H159 772 aa13.2□□□□□ -0.3
SPG7-207ENST00000563218 NT5MQ9NPB1 228 aa13.2□□□□□ -0.3
SPG7-207ENST00000563218 RAB6BQ9NRW1 208 aa13.2□□□□□ -0.3
SPG7-207ENST00000563218 KLHL8Q9P2G9 620 aaPredicted RBP13.2□□□□□ -0.3
SPG7-207ENST00000563218 TRHDEQ9UKU6 1024 aa13.2□□□□□ -0.3
SPG7-207ENST00000563218 SHOC2Q9UQ13 582 aa13.2□□□□□ -0.3
SPG7-207ENST00000563218 KCNK1O00180 336 aa13.19□□□□□ -0.3
SPG7-207ENST00000563218 PSMD11O00231 422 aa13.19□□□□□ -0.3
SPG7-207ENST00000563218 ATP8B1O43520 1251 aa13.19□□□□□ -0.3
SPG7-207ENST00000563218 FZD6O60353 706 aa13.19□□□□□ -0.3
SPG7-207ENST00000563218 SFTPCP11686 197 aa13.19□□□□□ -0.3
SPG7-207ENST00000563218 PTPN3P26045 913 aa13.19□□□□□ -0.3
SPG7-207ENST00000563218 TEAD1P28347 426 aa13.19□□□□□ -0.3
SPG7-207ENST00000563218 OAS2P29728 719 aaKnown RBP13.19□□□□□ -0.3
SPG7-207ENST00000563218 FDFT1P37268 417 aa13.19□□□□□ -0.3
SPG7-207ENST00000563218 MMP13P45452 471 aa13.19□□□□□ -0.3
SPG7-207ENST00000563218 PPM1FP49593 454 aaPredicted RBP13.19□□□□□ -0.3
SPG7-207ENST00000563218 PTSQ03393 145 aa13.19□□□□□ -0.3
SPG7-207ENST00000563218 DPTQ07507 201 aa13.19□□□□□ -0.3
SPG7-207ENST00000563218 WASHC5Q12768 1159 aa13.19□□□□□ -0.3
SPG7-207ENST00000563218 SQSTM1Q13501 440 aa13.19□□□□□ -0.3
SPG7-207ENST00000563218 CLPPQ16740 277 aaPredicted RBP13.19□□□□□ -0.3
SPG7-207ENST00000563218 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.19□□□□□ -0.3
SPG7-207ENST00000563218 ITPRIPL1Q6GPH6 555 aa13.19□□□□□ -0.3
SPG7-207ENST00000563218 TMEM71Q6P5X7 295 aa13.19□□□□□ -0.3
SPG7-207ENST00000563218 ADAMTSL4Q6UY14 1074 aa13.19□□□□□ -0.3
SPG7-207ENST00000563218 USP45Q70EL2 814 aa13.19□□□□□ -0.3
SPG7-207ENST00000563218 PID1Q7Z2X4 250 aa13.19□□□□□ -0.3
SPG7-207ENST00000563218 ZNF567Q8N184 647 aa13.19□□□□□ -0.3
SPG7-207ENST00000563218 NSMCE1Q8WV22 266 aa13.19□□□□□ -0.3
SPG7-207ENST00000563218 CPT1BQ92523 772 aa13.19□□□□□ -0.3
SPG7-207ENST00000563218 COX14Q96I36 57 aa13.19□□□□□ -0.3
SPG7-207ENST00000563218 SPRY4Q9C004 299 aa13.19□□□□□ -0.3
SPG7-207ENST00000563218 ADNPQ9H2P0 1102 aa13.19□□□□□ -0.3
SPG7-207ENST00000563218 ZNF71Q9NQZ8 489 aaPredicted RBP13.19□□□□□ -0.3
SPG7-207ENST00000563218 PILRAQ9UKJ1 303 aa13.19□□□□□ -0.3
SPG7-207ENST00000563218 PPIL1Q9Y3C6 166 aa13.19□□□□□ -0.3
SPG7-207ENST00000563218 MRPS18BQ9Y676 258 aaKnown RBP13.19□□□□□ -0.3
SPG7-207ENST00000563218 E7EVH7 732 aa13.18□□□□□ -0.3
SPG7-207ENST00000563218 MATN3O15232 486 aa13.18□□□□□ -0.3
SPG7-207ENST00000563218 DNAJC6O75061 913 aa13.18□□□□□ -0.3
SPG7-207ENST00000563218 HSPA9P38646 679 aaKnown RBP13.18□□□□□ -0.3
SPG7-207ENST00000563218 FASLGP48023 281 aa13.18□□□□□ -0.3
SPG7-207ENST00000563218 LMAN1P49257 510 aa13.18□□□□□ -0.3
SPG7-207ENST00000563218 IFI35P80217 286 aaPredicted RBP13.18□□□□□ -0.3
SPG7-207ENST00000563218 DSC2Q02487 901 aa13.18□□□□□ -0.3
SPG7-207ENST00000563218 DHX9Q08211 1270 aaKnown RBP13.18□□□□□ -0.3
SPG7-207ENST00000563218 NFATC2Q13469 925 aa13.18□□□□□ -0.3
SPG7-207ENST00000563218 CASP8Q14790 479 aa13.18□□□□□ -0.3
SPG7-207ENST00000563218 SLMAPQ14BN4 828 aa13.18□□□□□ -0.3
SPG7-207ENST00000563218 PARP6Q2NL67 630 aa13.18□□□□□ -0.3
SPG7-207ENST00000563218 TEX44Q53QW1 395 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms