RNA–Protein interactions for RNA: ENST00000562866.1

VPS9D1-AS1-202, VPS9D1 antisense RNA 1, humanhuman

TSL 2 BASIC

Gene VPS9D1-AS1, Length 1,753 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-202ENST00000562866 HOXA9P31269 272 aa21.05■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 CBSP35520 551 aa21.05■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 MRPS22P82650 360 aaKnown RBP21.05■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 METTL2BQ6P1Q9 378 aaKnown RBP21.05■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 GPR26Q8NDV2 337 aa21.05■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 TCEAL4Q96EI5 215 aa21.05■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 AIG1Q9NVV5 245 aa21.05■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 KCTD5Q9NXV2 234 aa21.05■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 GIMAP2Q9UG22 337 aa21.05■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 ZNF225Q9UK10 706 aa21.05■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 BNIP3LO60238 219 aa21.04■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 OR4F21O95013 312 aa21.04■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 HSPA8P11142 646 aaKnown RBP21.04■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 ERVK-8P63133 956 aa21.04■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 FOXM1Q08050 763 aa21.04■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 GTF2H2Q13888 395 aa21.04■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 RARS2Q5T160 578 aaKnown RBP21.04■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 OGFRL1Q5TC84 451 aaPredicted RBP21.04■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 FAM219BQ5XKK7 198 aa21.04■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 LPCAT4Q643R3 524 aa21.04■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 GTF2H2CQ6P1K8 395 aa21.04■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 GOLGA7Q7Z5G4 137 aa21.04■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 SPATA24Q86W54 205 aa21.04■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 CLDN19Q8N6F1 224 aa21.04■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 SNX31Q8N9S9 440 aa21.04■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 LKAAEAR1Q8TD35 194 aa21.04■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 MYCBPQ99417 103 aaPredicted RBP21.04■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 VCXQ9H320 206 aa21.04■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 NOL11Q9H8H0 719 aaKnown RBP21.04■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 SPHK2Q9NRA0 654 aa21.04■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 CD300AQ9UGN4 299 aa21.04■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 PTBP2Q9UKA9 531 aaKnown RBP21.04■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 A8MX80 341 aa21.03■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 XYLBO75191 536 aa21.03■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 MOSPD3O75425 235 aa21.03■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 RHOP08100 348 aa21.03■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 VCLP18206 1134 aa21.03■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 PEX2P28328 305 aa21.03■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 CA5AP35218 305 aa21.03■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 MSX2P35548 267 aaPredicted RBP21.03■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 RECQLP46063 649 aaPredicted RBP21.03■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 SPATS1Q496A3 300 aa21.03■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 PDCD4Q53EL6 469 aaKnown RBP21.03■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 ASTLQ6HA08 431 aaPredicted RBP21.03■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 SULT1C3Q6IMI6 304 aa21.03■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 BLOC1S3Q6QNY0 202 aa21.03■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 LAYNQ6UX15 382 aa21.03■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 DPY19L3Q6ZPD9 716 aa21.03■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 CDYL2Q8N8U2 506 aa21.03■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 ESAMQ96AP7 390 aa21.03■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 PBXIP1Q96AQ6 731 aa21.03■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 VOPP1Q96AW1 172 aa21.03■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 OTUB2Q96DC9 234 aa21.03■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 COPS8Q99627 209 aa21.03■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 TLR9Q9NR96 1032 aa21.03■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 RWDD3Q9Y3V2 267 aa21.03■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 MAGEA13PA6NCF6 341 aa21.02■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 WASH3PC4AMC7 463 aa21.02■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 EIF3FO00303 357 aaPredicted RBP21.02■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 C8BP07358 591 aa21.02■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 HNRNPA1P09651 372 aaKnown RBP eCLIP21.02■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 TYRP14679 529 aa21.02■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 TCN1P20061 433 aaPredicted RBP21.02■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 NME5P56597 212 aa21.02■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 KCNK10P57789 538 aa21.02■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 ERVPABLB-1P60509 514 aa21.02■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 UBE3AQ05086 875 aa21.02■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 FPGSQ05932 587 aa21.02■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 ADGRE1Q14246 886 aa21.02■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 GDPD4Q6W3E5 623 aa21.02■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 MINDY1Q8N5J2 469 aa21.02■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 UBTD2Q8WUN7 234 aa21.02■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 ATP6V1E2Q96A05 226 aa21.02■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 CCDC97Q96F63 343 aaPredicted RBP21.02■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 GPATCH1Q9BRR8 931 aaKnown RBP21.02■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 SLC2A11Q9BYW1 496 aa21.02■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 BRINP2Q9C0B6 783 aa21.02■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 CXorf56Q9H5V9 222 aa21.02■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 BRD9Q9H8M2 597 aa21.02■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 RDH14Q9HBH5 336 aa21.02■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 PRKAG2Q9UGJ0 569 aa21.02■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 ASB1Q9Y576 335 aa21.02■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 SMNDC1O75940 238 aaKnown RBP eCLIP21.02■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 UGT2B4P06133 528 aa21.02■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 TCF3P15923 654 aa21.02■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 NFKBIAP25963 317 aa21.02■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 ARL1P40616 181 aaPredicted RBP21.02■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 PTSQ03393 145 aa21.02■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 ZNF77Q15935 545 aa21.02■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 ATP6AP1LQ52LC2 224 aa21.02■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 APLFQ8IW19 511 aaPredicted RBP21.02■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 OR52B6Q8NGF0 335 aa21.02■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 METTL6Q8TCB7 284 aa21.02■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 POF1BQ8WVV4 589 aa21.02■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 EGFL8Q99944 293 aa21.02■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 PKD2L2Q9NZM6 624 aa21.02■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 ZIM2Q9NZV7 527 aa21.02■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 SCOCQ9UIL1 159 aa21.02■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 TSR3Q9UJK0 312 aaKnown RBP21.02■□□□□ 0.96
VPS9D1-AS1-202ENST00000562866 DTNAQ9Y4J8 743 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms