RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 C5orf60A6NFR6 353 aa10.1□□□□□ -0.79
CLK3-205ENST00000561673 OR2AG2A6NM03 316 aa10.1□□□□□ -0.79
CLK3-205ENST00000561673 C2orf81A6NN90 581 aa10.1□□□□□ -0.79
CLK3-205ENST00000561673 KCNJ13O60928 360 aa10.1□□□□□ -0.79
CLK3-205ENST00000561673 PRAMEF1O95521 474 aa10.1□□□□□ -0.79
CLK3-205ENST00000561673 C9P02748 559 aa10.1□□□□□ -0.79
CLK3-205ENST00000561673 AMD1P17707 334 aa10.1□□□□□ -0.79
CLK3-205ENST00000561673 VCLP18206 1134 aa10.1□□□□□ -0.79
CLK3-205ENST00000561673 LPOP22079 712 aaPredicted RBP10.1□□□□□ -0.79
CLK3-205ENST00000561673 CETN2P41208 172 aa10.1□□□□□ -0.79
CLK3-205ENST00000561673 CYP4F2P78329 520 aa10.1□□□□□ -0.79
CLK3-205ENST00000561673 ITGA9Q13797 1035 aa10.1□□□□□ -0.79
CLK3-205ENST00000561673 GPR18Q14330 331 aa10.1□□□□□ -0.79
CLK3-205ENST00000561673 PRPSAP1Q14558 356 aa10.1□□□□□ -0.79
CLK3-205ENST00000561673 TAF1AQ15573 450 aaPredicted RBP10.1□□□□□ -0.79
CLK3-205ENST00000561673 GPRC6AQ5T6X5 926 aa10.1□□□□□ -0.79
CLK3-205ENST00000561673 DENND5AQ6IQ26 1287 aa10.1□□□□□ -0.79
CLK3-205ENST00000561673 FAM83HQ6ZRV2 1179 aaPredicted RBP10.1□□□□□ -0.79
CLK3-205ENST00000561673 KIAA1328Q86T90 577 aa10.1□□□□□ -0.79
CLK3-205ENST00000561673 EXD3Q8N9H8 876 aa10.1□□□□□ -0.79
CLK3-205ENST00000561673 ZSCAN1Q8NBB4 408 aa10.1□□□□□ -0.79
CLK3-205ENST00000561673 EXTL1Q92935 676 aa10.1□□□□□ -0.79
CLK3-205ENST00000561673 CXorf40BQ96DE9 158 aa10.1□□□□□ -0.79
CLK3-205ENST00000561673 RTP4Q96DX8 246 aa10.1□□□□□ -0.79
CLK3-205ENST00000561673 C9orf72Q96LT7 481 aa10.1□□□□□ -0.79
CLK3-205ENST00000561673 SPATA13Q96N96 652 aa10.1□□□□□ -0.79
CLK3-205ENST00000561673 TGM7Q96PF1 710 aa10.1□□□□□ -0.79
CLK3-205ENST00000561673 ZCCHC2Q9C0B9 1178 aaKnown RBP10.1□□□□□ -0.79
CLK3-205ENST00000561673 APMAPQ9HDC9 416 aa10.1□□□□□ -0.79
CLK3-205ENST00000561673 POT1Q9NUX5 634 aa10.1□□□□□ -0.79
CLK3-205ENST00000561673 PILRAQ9UKJ1 303 aa10.1□□□□□ -0.79
CLK3-205ENST00000561673 AMFRQ9UKV5 643 aa10.1□□□□□ -0.79
CLK3-205ENST00000561673 PACSIN2Q9UNF0 486 aaPredicted RBP10.1□□□□□ -0.79
CLK3-205ENST00000561673 MN1Q10571 1320 aaPredicted RBP10.09□□□□□ -0.79
CLK3-205ENST00000561673 CAPN5O15484 640 aaPredicted RBP10.09□□□□□ -0.79
CLK3-205ENST00000561673 DDX3YO15523 660 aaKnown RBP10.09□□□□□ -0.79
CLK3-205ENST00000561673 SRP72O76094 671 aaKnown RBP10.09□□□□□ -0.79
CLK3-205ENST00000561673 STK10O94804 968 aaKnown RBP10.09□□□□□ -0.79
CLK3-205ENST00000561673 FTCDO95954 541 aa10.09□□□□□ -0.79
CLK3-205ENST00000561673 ITGB2P05107 769 aa10.09□□□□□ -0.79
CLK3-205ENST00000561673 ANKRD34CP0C6C1 535 aa10.09□□□□□ -0.79
CLK3-205ENST00000561673 MSH3P20585 1137 aa10.09□□□□□ -0.79
CLK3-205ENST00000561673 LEPRP48357 1165 aaKnown RBP10.09□□□□□ -0.79
CLK3-205ENST00000561673 ATP1A2P50993 1020 aa10.09□□□□□ -0.79
CLK3-205ENST00000561673 DMPKQ09013 629 aa10.09□□□□□ -0.79
CLK3-205ENST00000561673 NFE2L1Q14494 772 aa10.09□□□□□ -0.79
CLK3-205ENST00000561673 SPARCL1Q14515 664 aa10.09□□□□□ -0.79
CLK3-205ENST00000561673 RPE65Q16518 533 aa10.09□□□□□ -0.79
CLK3-205ENST00000561673 FNBP1LQ5T0N5 605 aa10.09□□□□□ -0.79
CLK3-205ENST00000561673 CEACAM20Q6UY09 585 aa10.09□□□□□ -0.79
CLK3-205ENST00000561673 DET1Q7L5Y6 550 aa10.09□□□□□ -0.79
CLK3-205ENST00000561673 PEX26Q7Z412 305 aa10.09□□□□□ -0.79
CLK3-205ENST00000561673 ZNF605Q86T29 641 aa10.09□□□□□ -0.79
CLK3-205ENST00000561673 RBM12BQ8IXT5 1001 aaKnown RBP10.09□□□□□ -0.79
CLK3-205ENST00000561673 CACNA2D3Q8IZS8 1091 aa10.09□□□□□ -0.79
CLK3-205ENST00000561673 IL22RA1Q8N6P7 574 aa10.09□□□□□ -0.79
CLK3-205ENST00000561673 UBL4BQ8N7F7 174 aa10.09□□□□□ -0.79
CLK3-205ENST00000561673 BEND7Q8N7W2 519 aaPredicted RBP10.09□□□□□ -0.79
CLK3-205ENST00000561673 FAM71DQ8N9W8 422 aa10.09□□□□□ -0.79
CLK3-205ENST00000561673 NAT14Q8WUY8 206 aa10.09□□□□□ -0.79
CLK3-205ENST00000561673 MED8Q96G25 268 aa10.09□□□□□ -0.79
CLK3-205ENST00000561673 TEFMQ96QE5 360 aaKnown RBP10.09□□□□□ -0.79
CLK3-205ENST00000561673 TBL1YQ9BQ87 522 aa10.09□□□□□ -0.79
CLK3-205ENST00000561673 ZPBPQ9BS86 351 aa10.09□□□□□ -0.79
CLK3-205ENST00000561673 DESI2Q9BSY9 194 aa10.09□□□□□ -0.79
CLK3-205ENST00000561673 ASB8Q9H765 288 aa10.09□□□□□ -0.79
CLK3-205ENST00000561673 SMOXQ9NWM0 555 aa10.09□□□□□ -0.79
CLK3-205ENST00000561673 FKBPLQ9UIM3 349 aa10.09□□□□□ -0.79
CLK3-205ENST00000561673 PSMD13Q9UNM6 376 aa10.09□□□□□ -0.79
CLK3-205ENST00000561673 DNMT3AQ9Y6K1 912 aaPredicted RBP10.09□□□□□ -0.79
CLK3-205ENST00000561673 ZFC3H1O60293 1989 aaKnown RBP10.08□□□□□ -0.8
CLK3-205ENST00000561673 HELZ2Q9BYK8 2649 aaKnown RBP10.08□□□□□ -0.8
CLK3-205ENST00000561673 TENM4Q6N022 2769 aa10.08□□□□□ -0.8
CLK3-205ENST00000561673 TCRBV7S2A1N4TA0A589 114 aa10.08□□□□□ -0.8
CLK3-205ENST00000561673 POLR1CO15160 346 aaPredicted RBP10.08□□□□□ -0.8
CLK3-205ENST00000561673 TOX3O15405 576 aaPredicted RBP10.08□□□□□ -0.8
CLK3-205ENST00000561673 KIF1CO43896 1103 aaKnown RBP10.08□□□□□ -0.8
CLK3-205ENST00000561673 RAD1O60671 282 aa10.08□□□□□ -0.8
CLK3-205ENST00000561673 CRTAMO95727 393 aa10.08□□□□□ -0.8
CLK3-205ENST00000561673 PLA2G2AP14555 144 aa10.08□□□□□ -0.8
CLK3-205ENST00000561673 LIFP15018 202 aa10.08□□□□□ -0.8
CLK3-205ENST00000561673 PBLDP30039 288 aaPredicted RBP10.08□□□□□ -0.8
CLK3-205ENST00000561673 AKT1P31749 480 aa10.08□□□□□ -0.8
CLK3-205ENST00000561673 HALP42357 657 aa10.08□□□□□ -0.8
CLK3-205ENST00000561673 CAPZBP47756 277 aa10.08□□□□□ -0.8
CLK3-205ENST00000561673 SEPHS1P49903 392 aa10.08□□□□□ -0.8
CLK3-205ENST00000561673 TMPRSS15P98073 1019 aa10.08□□□□□ -0.8
CLK3-205ENST00000561673 XIAPP98170 497 aa10.08□□□□□ -0.8
CLK3-205ENST00000561673 KIF5AQ12840 1032 aa10.08□□□□□ -0.8
CLK3-205ENST00000561673 KLF1Q13351 362 aaPredicted RBP10.08□□□□□ -0.8
CLK3-205ENST00000561673 TBR1Q16650 682 aa10.08□□□□□ -0.8
CLK3-205ENST00000561673 LONRF2Q1L5Z9 754 aa10.08□□□□□ -0.8
CLK3-205ENST00000561673 METRNLQ641Q3 311 aa10.08□□□□□ -0.8
CLK3-205ENST00000561673 TIPARPQ7Z3E1 657 aaKnown RBP10.08□□□□□ -0.8
CLK3-205ENST00000561673 KLHDC8BQ8IXV7 354 aa10.08□□□□□ -0.8
CLK3-205ENST00000561673 SYCE1Q8N0S2 351 aa10.08□□□□□ -0.8
CLK3-205ENST00000561673 NLGN4XQ8N0W4 816 aa10.08□□□□□ -0.8
CLK3-205ENST00000561673 SPC24Q8NBT2 197 aa10.08□□□□□ -0.8
CLK3-205ENST00000561673 NLGN4YQ8NFZ3 816 aaPredicted RBP10.08□□□□□ -0.8
CLK3-205ENST00000561673 OR13C4Q8NGS5 318 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms