RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 NFE2L3Q9Y4A8 694 aa3.76□□□□□ -1.81
HERC1-215ENST00000561436 SSC5DA1L4H1 1573 aa3.76□□□□□ -1.81
HERC1-215ENST00000561436 DICER1Q9UPY3 1922 aaKnown RBP3.76□□□□□ -1.81
HERC1-215ENST00000561436 PDS5AQ29RF7 1337 aaKnown RBP3.75□□□□□ -1.81
HERC1-215ENST00000561436 SALL1Q9NSC2 1324 aa3.75□□□□□ -1.81
HERC1-215ENST00000561436 LOC100509620A0A075B734 347 aa3.75□□□□□ -1.81
HERC1-215ENST00000561436 TCP10L2B9ZVM9 353 aa3.75□□□□□ -1.81
HERC1-215ENST00000561436 H3BNX3 289 aa3.75□□□□□ -1.81
HERC1-215ENST00000561436 JRKO75564 520 aa3.75□□□□□ -1.81
HERC1-215ENST00000561436 HIST1H2ABP04908 130 aa3.75□□□□□ -1.81
HERC1-215ENST00000561436 HIST1H2ADP20671 130 aa3.75□□□□□ -1.81
HERC1-215ENST00000561436 SCP2P22307 547 aa3.75□□□□□ -1.81
HERC1-215ENST00000561436 GNLYP22749 145 aa3.75□□□□□ -1.81
HERC1-215ENST00000561436 KRT20P35900 424 aa3.75□□□□□ -1.81
HERC1-215ENST00000561436 UBA7P41226 1012 aa3.75□□□□□ -1.81
HERC1-215ENST00000561436 GARSP41250 739 aaKnown RBP3.75□□□□□ -1.81
HERC1-215ENST00000561436 CXCR3P49682 368 aa3.75□□□□□ -1.81
HERC1-215ENST00000561436 NUDT6P53370 316 aa3.75□□□□□ -1.81
HERC1-215ENST00000561436 MFAP4P55083 255 aa3.75□□□□□ -1.81
HERC1-215ENST00000561436 ROR2Q01974 943 aaKnown RBP3.75□□□□□ -1.81
HERC1-215ENST00000561436 IKQ13123 557 aaPredicted RBP3.75□□□□□ -1.81
HERC1-215ENST00000561436 FHL1Q13642 323 aa3.75□□□□□ -1.81
HERC1-215ENST00000561436 TWIST1Q15672 202 aa3.75□□□□□ -1.81
HERC1-215ENST00000561436 TWISTNBQ3B726 338 aaPredicted RBP3.75□□□□□ -1.81
HERC1-215ENST00000561436 RABL6Q3YEC7 729 aaPredicted RBP3.75□□□□□ -1.81
HERC1-215ENST00000561436 SGO1Q5FBB7 561 aa3.75□□□□□ -1.81
HERC1-215ENST00000561436 PPP6R3Q5H9R7 873 aaPredicted RBP3.75□□□□□ -1.81
HERC1-215ENST00000561436 BEND3Q5T5X7 828 aa3.75□□□□□ -1.81
HERC1-215ENST00000561436 GPR139Q6DWJ6 353 aa3.75□□□□□ -1.81
HERC1-215ENST00000561436 PLEKHA7Q6IQ23 1121 aa3.75□□□□□ -1.81
HERC1-215ENST00000561436 QSOX2Q6ZRP7 698 aa3.75□□□□□ -1.81
HERC1-215ENST00000561436 HIST3H2AQ7L7L0 130 aa3.75□□□□□ -1.81
HERC1-215ENST00000561436 SHFQ7M4L6 423 aa3.75□□□□□ -1.81
HERC1-215ENST00000561436 OR8H2Q8N162 312 aa3.75□□□□□ -1.81
HERC1-215ENST00000561436 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.75□□□□□ -1.81
HERC1-215ENST00000561436 C9orf106Q8NAJ2 232 aa3.75□□□□□ -1.81
HERC1-215ENST00000561436 NSMCE1Q8WV22 266 aa3.75□□□□□ -1.81
HERC1-215ENST00000561436 INPP5DQ92835 1189 aa3.75□□□□□ -1.81
HERC1-215ENST00000561436 ZKSCAN4Q969J2 545 aaPredicted RBP3.75□□□□□ -1.81
HERC1-215ENST00000561436 LRFN5Q96NI6 719 aa3.75□□□□□ -1.81
HERC1-215ENST00000561436 CAMK1GQ96NX5 476 aa3.75□□□□□ -1.81
HERC1-215ENST00000561436 DEFB118Q96PH6 123 aa3.75□□□□□ -1.81
HERC1-215ENST00000561436 TKTL2Q9H0I9 626 aa3.75□□□□□ -1.81
HERC1-215ENST00000561436 PLK3Q9H4B4 646 aa3.75□□□□□ -1.81
HERC1-215ENST00000561436 PDZD7Q9H5P4 517 aa3.75□□□□□ -1.81
HERC1-215ENST00000561436 SUCLA2Q9P2R7 463 aaPredicted RBP3.75□□□□□ -1.81
HERC1-215ENST00000561436 UBA2Q9UBT2 640 aaPredicted RBP3.75□□□□□ -1.81
HERC1-215ENST00000561436 MORF4L1Q9UBU8 362 aa3.75□□□□□ -1.81
HERC1-215ENST00000561436 FBXL17Q9UF56 701 aa3.75□□□□□ -1.81
HERC1-215ENST00000561436 FBXW11Q9UKB1 542 aa3.75□□□□□ -1.81
HERC1-215ENST00000561436 TTC7AQ9ULT0 858 aaPredicted RBP3.75□□□□□ -1.81
HERC1-215ENST00000561436 PCDHGB4Q9UN71 923 aa3.75□□□□□ -1.81
HERC1-215ENST00000561436 R3HDM2Q9Y2K5 976 aaKnown RBP3.75□□□□□ -1.81
HERC1-215ENST00000561436 SQORQ9Y6N5 450 aa3.75□□□□□ -1.81
HERC1-215ENST00000561436 A0A1B0GVM2 712 aa3.74□□□□□ -1.81
HERC1-215ENST00000561436 A0A1W2PQ09 198 aa3.74□□□□□ -1.81
HERC1-215ENST00000561436 LRRC72A6NJI9 287 aa3.74□□□□□ -1.81
HERC1-215ENST00000561436 OR6C75A6NL08 312 aa3.74□□□□□ -1.81
HERC1-215ENST00000561436 BTBD18B2RXH4 712 aa3.74□□□□□ -1.81
HERC1-215ENST00000561436 C19orf81C9J6K1 198 aa3.74□□□□□ -1.81
HERC1-215ENST00000561436 CTDSP2O14595 271 aa3.74□□□□□ -1.81
HERC1-215ENST00000561436 WNT9BO14905 357 aa3.74□□□□□ -1.81
HERC1-215ENST00000561436 SPRY3O43610 288 aa3.74□□□□□ -1.81
HERC1-215ENST00000561436 LDB2O43679 373 aa3.74□□□□□ -1.81
HERC1-215ENST00000561436 FRAT2O75474 233 aaPredicted RBP3.74□□□□□ -1.81
HERC1-215ENST00000561436 BEST1O76090 585 aa3.74□□□□□ -1.81
HERC1-215ENST00000561436 GABRB1P18505 474 aa3.74□□□□□ -1.81
HERC1-215ENST00000561436 RRM1P23921 792 aa3.74□□□□□ -1.81
HERC1-215ENST00000561436 HOXD3P31249 432 aaPredicted RBP3.74□□□□□ -1.81
HERC1-215ENST00000561436 SLC15A1P46059 708 aa3.74□□□□□ -1.81
HERC1-215ENST00000561436 METAP2P50579 478 aaKnown RBP eCLIP3.74□□□□□ -1.81
HERC1-215ENST00000561436 MRPS34P82930 218 aaKnown RBP3.74□□□□□ -1.81
HERC1-215ENST00000561436 DSC1Q08554 894 aa3.74□□□□□ -1.81
HERC1-215ENST00000561436 TRAF2Q12933 501 aa3.74□□□□□ -1.81
HERC1-215ENST00000561436 C15orf59Q2T9L4 293 aaPredicted RBP3.74□□□□□ -1.81
HERC1-215ENST00000561436 ASTE1Q2TB18 679 aaPredicted RBP3.74□□□□□ -1.81
HERC1-215ENST00000561436 ZNF284Q2VY69 593 aa3.74□□□□□ -1.81
HERC1-215ENST00000561436 LEXMQ3ZCV2 418 aa3.74□□□□□ -1.81
HERC1-215ENST00000561436 MMEL1Q495T6 779 aa3.74□□□□□ -1.81
HERC1-215ENST00000561436 SOWAHCQ53LP3 525 aaPredicted RBP3.74□□□□□ -1.81
HERC1-215ENST00000561436 LCE1AQ5T7P2 110 aa3.74□□□□□ -1.81
HERC1-215ENST00000561436 TYW3Q6IPR3 259 aaKnown RBP3.74□□□□□ -1.81
HERC1-215ENST00000561436 PQLC2Q6ZP29 291 aa3.74□□□□□ -1.81
HERC1-215ENST00000561436 ZNF367Q7RTV3 350 aa3.74□□□□□ -1.81
HERC1-215ENST00000561436 HAPLN4Q86UW8 402 aa3.74□□□□□ -1.81
HERC1-215ENST00000561436 ARID3BQ8IVW6 561 aaPredicted RBP3.74□□□□□ -1.81
HERC1-215ENST00000561436 POC5Q8NA72 575 aa3.74□□□□□ -1.81
HERC1-215ENST00000561436 MCUQ8NE86 351 aa3.74□□□□□ -1.81
HERC1-215ENST00000561436 OR14L1PQ8NHC6 308 aa3.74□□□□□ -1.81
HERC1-215ENST00000561436 ARRDC2Q8TBH0 407 aa3.74□□□□□ -1.81
HERC1-215ENST00000561436 ASB5Q8WWX0 329 aa3.74□□□□□ -1.81
HERC1-215ENST00000561436 ERGIC1Q969X5 290 aa3.74□□□□□ -1.81
HERC1-215ENST00000561436 ERP27Q96DN0 273 aa3.74□□□□□ -1.81
HERC1-215ENST00000561436 ELMOD3Q96FG2 381 aa3.74□□□□□ -1.81
HERC1-215ENST00000561436 C1QTNF5Q9BXJ0 243 aa3.74□□□□□ -1.81
HERC1-215ENST00000561436 SIL1Q9H173 461 aa3.74□□□□□ -1.81
HERC1-215ENST00000561436 PLAC1Q9HBJ0 212 aa3.74□□□□□ -1.81
HERC1-215ENST00000561436 ANKEF1Q9NU02 776 aa3.74□□□□□ -1.81
HERC1-215ENST00000561436 GIMAP4Q9NUV9 329 aa3.74□□□□□ -1.81
HERC1-215ENST00000561436 CPSF2Q9P2I0 782 aaKnown RBP3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms