RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 ACTR1AP61163 376 aa9.47□□□□□ -0.89
RABGGTA-221ENST00000561055 FOXK2Q01167 660 aa9.47□□□□□ -0.89
RABGGTA-221ENST00000561055 SLC7A5Q01650 507 aa9.47□□□□□ -0.89
RABGGTA-221ENST00000561055 PDIA2Q13087 525 aaKnown RBP9.47□□□□□ -0.89
RABGGTA-221ENST00000561055 HLTFQ14527 1009 aaKnown RBP eCLIP9.47□□□□□ -0.89
RABGGTA-221ENST00000561055 CRYMQ14894 314 aa9.47□□□□□ -0.89
RABGGTA-221ENST00000561055 NR1D2Q14995 579 aa9.47□□□□□ -0.89
RABGGTA-221ENST00000561055 BBS9Q3SYG4 887 aa9.47□□□□□ -0.89
RABGGTA-221ENST00000561055 C14orf28Q4W4Y0 310 aa9.47□□□□□ -0.89
RABGGTA-221ENST00000561055 NEPROQ6NW34 567 aa9.47□□□□□ -0.89
RABGGTA-221ENST00000561055 IYDQ6PHW0 289 aa9.47□□□□□ -0.89
RABGGTA-221ENST00000561055 SLC30A9Q6PML9 568 aa9.47□□□□□ -0.89
RABGGTA-221ENST00000561055 CRTC3Q6UUV7 619 aa9.47□□□□□ -0.89
RABGGTA-221ENST00000561055 XKR5Q6UX68 686 aa9.47□□□□□ -0.89
RABGGTA-221ENST00000561055 MICALCLQ6ZW33 695 aa9.47□□□□□ -0.89
RABGGTA-221ENST00000561055 CENPUQ71F23 418 aa9.47□□□□□ -0.89
RABGGTA-221ENST00000561055 GALNT7Q86SF2 657 aa9.47□□□□□ -0.89
RABGGTA-221ENST00000561055 SDCCAG8Q86SQ7 713 aaPredicted RBP9.47□□□□□ -0.89
RABGGTA-221ENST00000561055 LRRC6Q86X45 466 aa9.47□□□□□ -0.89
RABGGTA-221ENST00000561055 CILP2Q8IUL8 1156 aa9.47□□□□□ -0.89
RABGGTA-221ENST00000561055 TRAPPC5Q8IUR0 188 aa9.47□□□□□ -0.89
RABGGTA-221ENST00000561055 RELL1Q8IUW5 271 aa9.47□□□□□ -0.89
RABGGTA-221ENST00000561055 CNTN4Q8IWV2 1026 aa9.47□□□□□ -0.89
RABGGTA-221ENST00000561055 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.47□□□□□ -0.89
RABGGTA-221ENST00000561055 CALML6Q8TD86 181 aa9.47□□□□□ -0.89
RABGGTA-221ENST00000561055 ZDHHC1Q8WTX9 485 aa9.47□□□□□ -0.89
RABGGTA-221ENST00000561055 CCDC97Q96F63 343 aaPredicted RBP9.47□□□□□ -0.89
RABGGTA-221ENST00000561055 PWWP2AQ96N64 755 aa9.47□□□□□ -0.89
RABGGTA-221ENST00000561055 CCM2Q9BSQ5 444 aa9.47□□□□□ -0.89
RABGGTA-221ENST00000561055 P2RY12Q9H244 342 aa9.47□□□□□ -0.89
RABGGTA-221ENST00000561055 DPEP2Q9H4A9 486 aa9.47□□□□□ -0.89
RABGGTA-221ENST00000561055 EPB41L5Q9HCM4 733 aa9.47□□□□□ -0.89
RABGGTA-221ENST00000561055 LATS2Q9NRM7 1088 aa9.47□□□□□ -0.89
RABGGTA-221ENST00000561055 KLC4Q9NSK0 619 aa9.47□□□□□ -0.89
RABGGTA-221ENST00000561055 INTS10Q9NVR2 710 aaKnown RBP9.47□□□□□ -0.89
RABGGTA-221ENST00000561055 MOCS1Q9NZB8 636 aa9.47□□□□□ -0.89
RABGGTA-221ENST00000561055 VPS9D1Q9Y2B5 631 aa9.47□□□□□ -0.89
RABGGTA-221ENST00000561055 KIF26BQ2KJY2 2108 aa9.47□□□□□ -0.89
RABGGTA-221ENST00000561055 KIR2DS5A0A0G2JLQ3 304 aa9.46□□□□□ -0.9
RABGGTA-221ENST00000561055 A0A0G2JNG1 304 aa9.46□□□□□ -0.9
RABGGTA-221ENST00000561055 KIR2DS3K7RE56 304 aa9.46□□□□□ -0.9
RABGGTA-221ENST00000561055 PRMT5O14744 637 aaPredicted RBP9.46□□□□□ -0.9
RABGGTA-221ENST00000561055 GIPC1O14908 333 aa9.46□□□□□ -0.9
RABGGTA-221ENST00000561055 PFDN6O15212 129 aa9.46□□□□□ -0.9
RABGGTA-221ENST00000561055 NUDT21O43809 227 aaKnown RBP9.46□□□□□ -0.9
RABGGTA-221ENST00000561055 BANF1O75531 89 aa9.46□□□□□ -0.9
RABGGTA-221ENST00000561055 S1PR4O95977 384 aa9.46□□□□□ -0.9
RABGGTA-221ENST00000561055 GSTA2P09210 222 aa9.46□□□□□ -0.9
RABGGTA-221ENST00000561055 GLB1P16278 677 aa9.46□□□□□ -0.9
RABGGTA-221ENST00000561055 XRCC1P18887 633 aaPredicted RBP9.46□□□□□ -0.9
RABGGTA-221ENST00000561055 IDSP22304 550 aa9.46□□□□□ -0.9
RABGGTA-221ENST00000561055 DEKP35659 375 aaKnown RBP9.46□□□□□ -0.9
RABGGTA-221ENST00000561055 FASLGP48023 281 aa9.46□□□□□ -0.9
RABGGTA-221ENST00000561055 TUBB4BP68371 445 aa9.46□□□□□ -0.9
RABGGTA-221ENST00000561055 GUCY2DQ02846 1103 aa9.46□□□□□ -0.9
RABGGTA-221ENST00000561055 RPA4Q13156 261 aa9.46□□□□□ -0.9
RABGGTA-221ENST00000561055 KIR2DS5Q14953 304 aa9.46□□□□□ -0.9
RABGGTA-221ENST00000561055 NR0B2Q15466 257 aa9.46□□□□□ -0.9
RABGGTA-221ENST00000561055 INSCQ1MX18 579 aa9.46□□□□□ -0.9
RABGGTA-221ENST00000561055 RNF187Q5TA31 235 aaPredicted RBP9.46□□□□□ -0.9
RABGGTA-221ENST00000561055 ZNF449Q6P9G9 518 aa9.46□□□□□ -0.9
RABGGTA-221ENST00000561055 UNC5AQ6ZN44 842 aa9.46□□□□□ -0.9
RABGGTA-221ENST00000561055 KIAA0408Q6ZU52 694 aa9.46□□□□□ -0.9
RABGGTA-221ENST00000561055 ZNF438Q7Z4V0 828 aa9.46□□□□□ -0.9
RABGGTA-221ENST00000561055 CACTIN-AS1Q8N1I8 211 aa9.46□□□□□ -0.9
RABGGTA-221ENST00000561055 SFRP1Q8N474 314 aa9.46□□□□□ -0.9
RABGGTA-221ENST00000561055 CLDN19Q8N6F1 224 aa9.46□□□□□ -0.9
RABGGTA-221ENST00000561055 BEND7Q8N7W2 519 aaPredicted RBP9.46□□□□□ -0.9
RABGGTA-221ENST00000561055 EIF1ADQ8N9N8 165 aaKnown RBP9.46□□□□□ -0.9
RABGGTA-221ENST00000561055 AVL9Q8NBF6 648 aa9.46□□□□□ -0.9
RABGGTA-221ENST00000561055 GABPB2Q8TAK5 448 aaPredicted RBP9.46□□□□□ -0.9
RABGGTA-221ENST00000561055 NAT6Q93015 286 aa9.46□□□□□ -0.9
RABGGTA-221ENST00000561055 CERS2Q96G23 380 aa9.46□□□□□ -0.9
RABGGTA-221ENST00000561055 BIRC8Q96P09 236 aa9.46□□□□□ -0.9
RABGGTA-221ENST00000561055 TSPYL1Q9H0U9 437 aa9.46□□□□□ -0.9
RABGGTA-221ENST00000561055 VPS37BQ9H9H4 285 aa9.46□□□□□ -0.9
RABGGTA-221ENST00000561055 TBC1D29Q9UFV1 150 aa9.46□□□□□ -0.9
RABGGTA-221ENST00000561055 ZC3H7BQ9UGR2 993 aaKnown RBP9.46□□□□□ -0.9
RABGGTA-221ENST00000561055 ACSL5Q9ULC5 683 aa9.46□□□□□ -0.9
RABGGTA-221ENST00000561055 PADI4Q9UM07 663 aa9.46□□□□□ -0.9
RABGGTA-221ENST00000561055 CHMP2BQ9UQN3 213 aa9.46□□□□□ -0.9
RABGGTA-221ENST00000561055 APOBEC2Q9Y235 224 aaKnown RBP9.46□□□□□ -0.9
RABGGTA-221ENST00000561055 KCNK6Q9Y257 313 aa9.46□□□□□ -0.9
RABGGTA-221ENST00000561055 PRSS21Q9Y6M0 314 aa9.46□□□□□ -0.9
RABGGTA-221ENST00000561055 SNRNP200O75643 2136 aaKnown RBP9.46□□□□□ -0.9
RABGGTA-221ENST00000561055 SPEGQ15772 3267 aa9.45□□□□□ -0.9
RABGGTA-221ENST00000561055 ESYT3A0FGR9 886 aa9.45□□□□□ -0.9
RABGGTA-221ENST00000561055 LIN7AO14910 233 aaPredicted RBP9.45□□□□□ -0.9
RABGGTA-221ENST00000561055 OR1I1O60431 355 aa9.45□□□□□ -0.9
RABGGTA-221ENST00000561055 NDUFS3O75489 264 aa9.45□□□□□ -0.9
RABGGTA-221ENST00000561055 TRIM16O95361 564 aa9.45□□□□□ -0.9
RABGGTA-221ENST00000561055 EML2O95834 649 aa9.45□□□□□ -0.9
RABGGTA-221ENST00000561055 FTH1P02794 183 aa9.45□□□□□ -0.9
RABGGTA-221ENST00000561055 ESR1P03372 595 aa9.45□□□□□ -0.9
RABGGTA-221ENST00000561055 OR56A5P0C7T3 313 aa9.45□□□□□ -0.9
RABGGTA-221ENST00000561055 BRAFP15056 766 aa9.45□□□□□ -0.9
RABGGTA-221ENST00000561055 PMLP29590 882 aa9.45□□□□□ -0.9
RABGGTA-221ENST00000561055 LEPRP48357 1165 aaKnown RBP9.45□□□□□ -0.9
RABGGTA-221ENST00000561055 CD151P48509 253 aa9.45□□□□□ -0.9
RABGGTA-221ENST00000561055 SIM1P81133 766 aaPredicted RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms