RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 ZDHHC12Q96GR4 267 aa15.91■□□□□ 0.14
SNX1-213ENST00000561026 FSD1LQ9BXM9 530 aa15.91■□□□□ 0.14
SNX1-213ENST00000561026 CLMPQ9H6B4 373 aa15.91■□□□□ 0.14
SNX1-213ENST00000561026 EPHA6Q9UF33 1036 aa15.91■□□□□ 0.14
SNX1-213ENST00000561026 IL17BQ9UHF5 180 aa15.91■□□□□ 0.14
SNX1-213ENST00000561026 DNMT3AQ9Y6K1 912 aaPredicted RBP15.91■□□□□ 0.14
SNX1-213ENST00000561026 H7C0C1 242 aa15.9■□□□□ 0.14
SNX1-213ENST00000561026 KIF1CO43896 1103 aaKnown RBP15.9■□□□□ 0.14
SNX1-213ENST00000561026 RASSF9O75901 435 aa15.9■□□□□ 0.14
SNX1-213ENST00000561026 AGTP01019 485 aa15.9■□□□□ 0.14
SNX1-213ENST00000561026 RBL1P28749 1068 aa15.9■□□□□ 0.14
SNX1-213ENST00000561026 STAT5AP42229 794 aa15.9■□□□□ 0.14
SNX1-213ENST00000561026 CCR10P46092 362 aa15.9■□□□□ 0.14
SNX1-213ENST00000561026 ATP5OP48047 213 aa15.9■□□□□ 0.14
SNX1-213ENST00000561026 COPS2P61201 443 aa15.9■□□□□ 0.14
SNX1-213ENST00000561026 SH3BP2P78314 561 aa15.9■□□□□ 0.14
SNX1-213ENST00000561026 ITGA9Q13797 1035 aa15.9■□□□□ 0.14
SNX1-213ENST00000561026 GPRC6AQ5T6X5 926 aa15.9■□□□□ 0.14
SNX1-213ENST00000561026 TMEM220Q6QAJ8 160 aa15.9■□□□□ 0.14
SNX1-213ENST00000561026 PRSS42Q7Z5A4 293 aa15.9■□□□□ 0.14
SNX1-213ENST00000561026 KLHL6Q8WZ60 621 aa15.9■□□□□ 0.14
SNX1-213ENST00000561026 OR6C1Q96RD1 312 aa15.9■□□□□ 0.14
SNX1-213ENST00000561026 ULBP3Q9BZM4 244 aa15.9■□□□□ 0.14
SNX1-213ENST00000561026 RAB33BQ9H082 229 aa15.9■□□□□ 0.14
SNX1-213ENST00000561026 GBA3Q9H227 469 aa15.9■□□□□ 0.14
SNX1-213ENST00000561026 C10orf88Q9H8K7 445 aa15.9■□□□□ 0.14
SNX1-213ENST00000561026 LUC7LQ9NQ29 371 aaKnown RBP15.9■□□□□ 0.14
SNX1-213ENST00000561026 SMOXQ9NWM0 555 aa15.9■□□□□ 0.14
SNX1-213ENST00000561026 TUBD1Q9UJT1 453 aa15.9■□□□□ 0.14
SNX1-213ENST00000561026 OR2AG2A6NM03 316 aa15.89■□□□□ 0.13
SNX1-213ENST00000561026 STX7O15400 261 aaKnown RBP15.89■□□□□ 0.13
SNX1-213ENST00000561026 ANXA9O76027 345 aa15.89■□□□□ 0.13
SNX1-213ENST00000561026 PRKAR1AP10644 381 aa15.89■□□□□ 0.13
SNX1-213ENST00000561026 ZNF28P17035 718 aa15.89■□□□□ 0.13
SNX1-213ENST00000561026 GEMP55040 296 aa15.89■□□□□ 0.13
SNX1-213ENST00000561026 KCNAB2Q13303 367 aa15.89■□□□□ 0.13
SNX1-213ENST00000561026 PTPRCAPQ14761 206 aa15.89■□□□□ 0.13
SNX1-213ENST00000561026 RPE65Q16518 533 aa15.89■□□□□ 0.13
SNX1-213ENST00000561026 CACHD1Q5VU97 1274 aa15.89■□□□□ 0.13
SNX1-213ENST00000561026 RANBP10Q6VN20 620 aa15.89■□□□□ 0.13
SNX1-213ENST00000561026 FAM83HQ6ZRV2 1179 aaPredicted RBP15.89■□□□□ 0.13
SNX1-213ENST00000561026 ZNF398Q8TD17 642 aa15.89■□□□□ 0.13
SNX1-213ENST00000561026 GORASP1Q9BQQ3 440 aa15.89■□□□□ 0.13
SNX1-213ENST00000561026 EFR3BQ9Y2G0 817 aa15.89■□□□□ 0.13
SNX1-213ENST00000561026 PCDHA3Q9Y5H8 950 aa15.89■□□□□ 0.13
SNX1-213ENST00000561026 ARL5AQ9Y689 179 aa15.89■□□□□ 0.13
SNX1-213ENST00000561026 RPS6KL1Q9Y6S9 549 aa15.89■□□□□ 0.13
SNX1-213ENST00000561026 TERTO14746 1132 aaKnown RBP15.88■□□□□ 0.13
SNX1-213ENST00000561026 FECHP22830 423 aa15.88■□□□□ 0.13
SNX1-213ENST00000561026 CTNNA1P35221 906 aaKnown RBP15.88■□□□□ 0.13
SNX1-213ENST00000561026 CYLC1P35663 651 aaPredicted RBP15.88■□□□□ 0.13
SNX1-213ENST00000561026 CSRP3P50461 194 aa15.88■□□□□ 0.13
SNX1-213ENST00000561026 MC1RQ01726 317 aa15.88■□□□□ 0.13
SNX1-213ENST00000561026 CDC20Q12834 499 aa15.88■□□□□ 0.13
SNX1-213ENST00000561026 NFE2L1Q14494 772 aa15.88■□□□□ 0.13
SNX1-213ENST00000561026 LONRF2Q1L5Z9 754 aa15.88■□□□□ 0.13
SNX1-213ENST00000561026 CRTC2Q53ET0 693 aaPredicted RBP15.88■□□□□ 0.13
SNX1-213ENST00000561026 CCDC181Q5TID7 509 aa15.88■□□□□ 0.13
SNX1-213ENST00000561026 METRNLQ641Q3 311 aa15.88■□□□□ 0.13
SNX1-213ENST00000561026 ITPRIPL1Q6GPH6 555 aa15.88■□□□□ 0.13
SNX1-213ENST00000561026 IRGCQ6NXR0 463 aa15.88■□□□□ 0.13
SNX1-213ENST00000561026 C6orf15Q6UXA7 325 aaPredicted RBP15.88■□□□□ 0.13
SNX1-213ENST00000561026 FAM92BQ6ZTR7 304 aa15.88■□□□□ 0.13
SNX1-213ENST00000561026 STARD8Q92502 1023 aa15.88■□□□□ 0.13
SNX1-213ENST00000561026 ZNF514Q96K75 400 aaPredicted RBP15.88■□□□□ 0.13
SNX1-213ENST00000561026 FERMT1Q9BQL6 677 aa15.88■□□□□ 0.13
SNX1-213ENST00000561026 FICDQ9BVA6 458 aa15.88■□□□□ 0.13
SNX1-213ENST00000561026 TRIM4Q9C037 500 aa15.88■□□□□ 0.13
SNX1-213ENST00000561026 PSMD13Q9UNM6 376 aa15.88■□□□□ 0.13
SNX1-213ENST00000561026 C5orf60A6NFR6 353 aa15.87■□□□□ 0.13
SNX1-213ENST00000561026 C2orf81A6NN90 581 aa15.87■□□□□ 0.13
SNX1-213ENST00000561026 PRAMEF1O95521 474 aa15.87■□□□□ 0.13
SNX1-213ENST00000561026 FGF5P12034 268 aa15.87■□□□□ 0.13
SNX1-213ENST00000561026 NELFEP18615 380 aaKnown RBP15.87■□□□□ 0.13
SNX1-213ENST00000561026 MSH3P20585 1137 aa15.87■□□□□ 0.13
SNX1-213ENST00000561026 LPOP22079 712 aaPredicted RBP15.87■□□□□ 0.13
SNX1-213ENST00000561026 OAS2P29728 719 aaKnown RBP15.87■□□□□ 0.13
SNX1-213ENST00000561026 ADRA1AP35348 466 aa15.87■□□□□ 0.13
SNX1-213ENST00000561026 TAF1AQ15573 450 aaPredicted RBP15.87■□□□□ 0.13
SNX1-213ENST00000561026 FNBP1LQ5T0N5 605 aa15.87■□□□□ 0.13
SNX1-213ENST00000561026 KLHL35Q6PF15 583 aa15.87■□□□□ 0.13
SNX1-213ENST00000561026 RASGRP3Q8IV61 690 aa15.87■□□□□ 0.13
SNX1-213ENST00000561026 GPR150Q8NGU9 434 aa15.87■□□□□ 0.13
SNX1-213ENST00000561026 ACTL9Q8TC94 416 aa15.87■□□□□ 0.13
SNX1-213ENST00000561026 ELMO2Q96JJ3 720 aa15.87■□□□□ 0.13
SNX1-213ENST00000561026 CALR3Q96L12 384 aaKnown RBP15.87■□□□□ 0.13
SNX1-213ENST00000561026 SEMA5BQ9P283 1151 aa15.87■□□□□ 0.13
SNX1-213ENST00000561026 AAR2Q9Y312 384 aaKnown RBP15.87■□□□□ 0.13
SNX1-213ENST00000561026 EPN1Q9Y6I3 576 aaPredicted RBP15.87■□□□□ 0.13
SNX1-213ENST00000561026 RCCD1A6NED2 376 aa15.87■□□□□ 0.13
SNX1-213ENST00000561026 GOLGA6L3A6NEY3 463 aa15.87■□□□□ 0.13
SNX1-213ENST00000561026 MGAT4DA6NG13 374 aa15.87■□□□□ 0.13
SNX1-213ENST00000561026 SRP72O76094 671 aaKnown RBP15.87■□□□□ 0.13
SNX1-213ENST00000561026 KIAA0754O94854 1291 aa15.87■□□□□ 0.13
SNX1-213ENST00000561026 NDUFA10O95299 355 aa15.87■□□□□ 0.13
SNX1-213ENST00000561026 TCN2P20062 427 aa15.87■□□□□ 0.13
SNX1-213ENST00000561026 F8A1P23610 371 aa15.87■□□□□ 0.13
SNX1-213ENST00000561026 AKT1P31749 480 aa15.87■□□□□ 0.13
SNX1-213ENST00000561026 PTPN7P35236 360 aa15.87■□□□□ 0.13
SNX1-213ENST00000561026 PPP1CAP62136 330 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms