RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 CHST8Q9H2A9 424 aa18.14■□□□□ 0.49
TPM1-226ENST00000560959 MAP10Q9P2G4 905 aa18.14■□□□□ 0.49
TPM1-226ENST00000560959 TCFL5Q9UL49 500 aa18.14■□□□□ 0.49
TPM1-226ENST00000560959 SNX7Q9UNH6 387 aa18.14■□□□□ 0.49
TPM1-226ENST00000560959 WDR37Q9Y2I8 494 aa18.14■□□□□ 0.49
TPM1-226ENST00000560959 UBA6A0AVT1 1052 aaPredicted RBP18.13■□□□□ 0.49
TPM1-226ENST00000560959 MEN1O00255 615 aa18.13■□□□□ 0.49
TPM1-226ENST00000560959 ZBTB11O95625 1053 aaPredicted RBP18.13■□□□□ 0.49
TPM1-226ENST00000560959 CDK11BP21127 795 aaKnown RBP18.13■□□□□ 0.49
TPM1-226ENST00000560959 CD86P42081 329 aa18.13■□□□□ 0.49
TPM1-226ENST00000560959 ARSEP51690 589 aa18.13■□□□□ 0.49
TPM1-226ENST00000560959 DMPKQ09013 629 aa18.13■□□□□ 0.49
TPM1-226ENST00000560959 TMEM115Q12893 351 aaPredicted RBP18.13■□□□□ 0.49
TPM1-226ENST00000560959 MMRN1Q13201 1228 aa18.13■□□□□ 0.49
TPM1-226ENST00000560959 PLEKHS1Q5SXH7 462 aa18.13■□□□□ 0.49
TPM1-226ENST00000560959 TMTC4Q5T4D3 741 aa18.13■□□□□ 0.49
TPM1-226ENST00000560959 ALS2CLQ60I27 953 aa18.13■□□□□ 0.49
TPM1-226ENST00000560959 DSELQ8IZU8 1212 aa18.13■□□□□ 0.49
TPM1-226ENST00000560959 SLC38A9Q8NBW4 561 aa18.13■□□□□ 0.49
TPM1-226ENST00000560959 ZFPM2Q8WW38 1151 aa18.13■□□□□ 0.49
TPM1-226ENST00000560959 SRPK1Q96SB4 655 aaKnown RBP18.13■□□□□ 0.49
TPM1-226ENST00000560959 IP6K2Q9UHH9 426 aa18.13■□□□□ 0.49
TPM1-226ENST00000560959 DNMT3AQ9Y6K1 912 aaPredicted RBP18.13■□□□□ 0.49
TPM1-226ENST00000560959 CSMD1Q96PZ7 3565 aa18.13■□□□□ 0.49
TPM1-226ENST00000560959 OR5K3A6NET4 321 aa18.12■□□□□ 0.49
TPM1-226ENST00000560959 LRRC53A6NM62 1247 aa18.12■□□□□ 0.49
TPM1-226ENST00000560959 ZNF185O15231 689 aa18.12■□□□□ 0.49
TPM1-226ENST00000560959 CD48P09326 243 aa18.12■□□□□ 0.49
TPM1-226ENST00000560959 ITGA1P56199 1179 aa18.12■□□□□ 0.49
TPM1-226ENST00000560959 MYL5Q02045 173 aa18.12■□□□□ 0.49
TPM1-226ENST00000560959 NR6A1Q15406 480 aa18.12■□□□□ 0.49
TPM1-226ENST00000560959 ASIC2Q16515 512 aa18.12■□□□□ 0.49
TPM1-226ENST00000560959 PLEKHN1Q494U1 663 aaPredicted RBP18.12■□□□□ 0.49
TPM1-226ENST00000560959 DNTTIP2Q5QJE6 756 aaKnown RBP18.12■□□□□ 0.49
TPM1-226ENST00000560959 ENDOVQ8N8Q3 282 aaKnown RBP18.12■□□□□ 0.49
TPM1-226ENST00000560959 DTX3LQ8TDB6 740 aa18.12■□□□□ 0.49
TPM1-226ENST00000560959 CPT1BQ92523 772 aa18.12■□□□□ 0.49
TPM1-226ENST00000560959 HDAC11Q96DB2 347 aa18.12■□□□□ 0.49
TPM1-226ENST00000560959 C19orf60Q96EN9 201 aa18.12■□□□□ 0.49
TPM1-226ENST00000560959 TRIB3Q96RU7 358 aa18.12■□□□□ 0.49
TPM1-226ENST00000560959 BARD1Q99728 777 aaKnown RBP18.12■□□□□ 0.49
TPM1-226ENST00000560959 LUZP4Q9P127 313 aa18.12■□□□□ 0.49
TPM1-226ENST00000560959 BTRCQ9Y297 605 aa18.12■□□□□ 0.49
TPM1-226ENST00000560959 B3GNT3Q9Y2A9 372 aa18.12■□□□□ 0.49
TPM1-226ENST00000560959 ANKUB1A6NFN9 424 aa18.11■□□□□ 0.49
TPM1-226ENST00000560959 KLHL41O60662 606 aa18.11■□□□□ 0.49
TPM1-226ENST00000560959 MTX2O75431 263 aa18.11■□□□□ 0.49
TPM1-226ENST00000560959 BPIP17213 487 aa18.11■□□□□ 0.49
TPM1-226ENST00000560959 GTF2H3Q13889 308 aa18.11■□□□□ 0.49
TPM1-226ENST00000560959 DPYSL3Q14195 570 aa18.11■□□□□ 0.49
TPM1-226ENST00000560959 RPE65Q16518 533 aa18.11■□□□□ 0.49
TPM1-226ENST00000560959 HADHQ16836 314 aaKnown RBP18.11■□□□□ 0.49
TPM1-226ENST00000560959 KHDC1Q4VXA5 237 aaKnown RBP18.11■□□□□ 0.49
TPM1-226ENST00000560959 VWA5B1Q5TIE3 1220 aa18.11■□□□□ 0.49
TPM1-226ENST00000560959 IGFL3Q6UXB1 125 aa18.11■□□□□ 0.49
TPM1-226ENST00000560959 CERS6Q6ZMG9 384 aa18.11■□□□□ 0.49
TPM1-226ENST00000560959 AMZ2Q86W34 360 aa18.11■□□□□ 0.49
TPM1-226ENST00000560959 ZBTB2Q8N680 514 aa18.11■□□□□ 0.49
TPM1-226ENST00000560959 ZNF670Q9BS34 389 aa18.11■□□□□ 0.49
TPM1-226ENST00000560959 GPR63Q9BZJ6 419 aa18.11■□□□□ 0.49
TPM1-226ENST00000560959 SYTL2Q9HCH5 934 aa18.11■□□□□ 0.49
TPM1-226ENST00000560959 ASF1BQ9NVP2 202 aa18.11■□□□□ 0.49
TPM1-226ENST00000560959 HRASLS2Q9NWW9 162 aa18.11■□□□□ 0.49
TPM1-226ENST00000560959 TRIM10Q9UDY6 481 aa18.11■□□□□ 0.49
TPM1-226ENST00000560959 SHOC2Q9UQ13 582 aa18.11■□□□□ 0.49
TPM1-226ENST00000560959 ANKRD17O75179 2603 aaKnown RBP18.11■□□□□ 0.49
TPM1-226ENST00000560959 KRT86O43790 486 aa18.1■□□□□ 0.49
TPM1-226ENST00000560959 CAPN1P07384 714 aa18.1■□□□□ 0.49
TPM1-226ENST00000560959 MSL3P1P0C860 447 aa18.1■□□□□ 0.49
TPM1-226ENST00000560959 RORAP35398 523 aa18.1■□□□□ 0.49
TPM1-226ENST00000560959 GALNT3Q14435 633 aa18.1■□□□□ 0.49
TPM1-226ENST00000560959 PDK2Q15119 407 aa18.1■□□□□ 0.49
TPM1-226ENST00000560959 SLC14A2Q15849 920 aa18.1■□□□□ 0.49
TPM1-226ENST00000560959 CRB2Q5IJ48 1285 aa18.1■□□□□ 0.49
TPM1-226ENST00000560959 TRAPPC5Q8IUR0 188 aa18.1■□□□□ 0.49
TPM1-226ENST00000560959 CNTD1Q8N815 330 aa18.1■□□□□ 0.49
TPM1-226ENST00000560959 TTC25Q96NG3 672 aa18.1■□□□□ 0.49
TPM1-226ENST00000560959 IP6K3Q96PC2 410 aa18.1■□□□□ 0.49
TPM1-226ENST00000560959 TMPRSS11EQ9UL52 423 aa18.1■□□□□ 0.49
TPM1-226ENST00000560959 ZNF711Q9Y462 761 aa18.1■□□□□ 0.49
TPM1-226ENST00000560959 A6NL46 340 aa18.09■□□□□ 0.49
TPM1-226ENST00000560959 POU3F2P20265 443 aaPredicted RBP18.09■□□□□ 0.49
TPM1-226ENST00000560959 RIPPLY3P57055 190 aa18.09■□□□□ 0.49
TPM1-226ENST00000560959 IFI35P80217 286 aaPredicted RBP18.09■□□□□ 0.49
TPM1-226ENST00000560959 KLHL30Q0D2K2 578 aa18.09■□□□□ 0.49
TPM1-226ENST00000560959 ELOAQ14241 798 aaKnown RBP18.09■□□□□ 0.49
TPM1-226ENST00000560959 PLCL1Q15111 1095 aa18.09■□□□□ 0.49
TPM1-226ENST00000560959 GPR19Q15760 415 aa18.09■□□□□ 0.49
TPM1-226ENST00000560959 LCN10Q6JVE6 187 aa18.09■□□□□ 0.49
TPM1-226ENST00000560959 RBM43Q6ZSC3 357 aaKnown RBP18.09■□□□□ 0.49
TPM1-226ENST00000560959 OOSP2Q86WS3 158 aa18.09■□□□□ 0.49
TPM1-226ENST00000560959 MAP7D3Q8IWC1 876 aa18.09■□□□□ 0.49
TPM1-226ENST00000560959 CISD2Q8N5K1 135 aaKnown RBP18.09■□□□□ 0.49
TPM1-226ENST00000560959 GPR150Q8NGU9 434 aa18.09■□□□□ 0.49
TPM1-226ENST00000560959 TADA1Q96BN2 335 aa18.09■□□□□ 0.49
TPM1-226ENST00000560959 FAF2Q96CS3 445 aa18.09■□□□□ 0.49
TPM1-226ENST00000560959 SGSM3Q96HU1 749 aa18.09■□□□□ 0.49
TPM1-226ENST00000560959 PHF12Q96QT6 1004 aa18.09■□□□□ 0.49
TPM1-226ENST00000560959 DPH2Q9BQC3 489 aaPredicted RBP18.09■□□□□ 0.49
TPM1-226ENST00000560959 FANCEQ9HB96 536 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms