RNA–Protein interactions for RNA: ENST00000560834.1

CTDSPL2-210, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 571 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-210ENST00000560834 ZNF423Q2M1K9 1284 aa6.93□□□□□ -1.3
CTDSPL2-210ENST00000560834 KIF19Q2TAC6 998 aa6.93□□□□□ -1.3
CTDSPL2-210ENST00000560834 PLA2G4EQ3MJ16 856 aa6.93□□□□□ -1.3
CTDSPL2-210ENST00000560834 MAP9Q49MG5 647 aa6.93□□□□□ -1.3
CTDSPL2-210ENST00000560834 ZNF658BQ4V348 819 aaPredicted RBP6.93□□□□□ -1.3
CTDSPL2-210ENST00000560834 PYCR3Q53H96 274 aa6.93□□□□□ -1.3
CTDSPL2-210ENST00000560834 TRIM61Q5EBN2 209 aa6.93□□□□□ -1.3
CTDSPL2-210ENST00000560834 BEND6Q5SZJ8 279 aaPredicted RBP6.93□□□□□ -1.3
CTDSPL2-210ENST00000560834 RBM20Q5T481 1227 aaKnown RBP6.93□□□□□ -1.3
CTDSPL2-210ENST00000560834 LYPLAL1Q5VWZ2 237 aa6.93□□□□□ -1.3
CTDSPL2-210ENST00000560834 ZNF549Q6P9A3 640 aa6.93□□□□□ -1.3
CTDSPL2-210ENST00000560834 CNSTQ6PJW8 725 aa6.93□□□□□ -1.3
CTDSPL2-210ENST00000560834 CRTC3Q6UUV7 619 aa6.93□□□□□ -1.3
CTDSPL2-210ENST00000560834 ENPP7Q6UWV6 458 aa6.93□□□□□ -1.3
CTDSPL2-210ENST00000560834 DET1Q7L5Y6 550 aa6.93□□□□□ -1.3
CTDSPL2-210ENST00000560834 DCP2Q8IU60 420 aaKnown RBP6.93□□□□□ -1.3
CTDSPL2-210ENST00000560834 PHACTR4Q8IZ21 702 aa6.93□□□□□ -1.3
CTDSPL2-210ENST00000560834 OXR1Q8N573 874 aa6.93□□□□□ -1.3
CTDSPL2-210ENST00000560834 CLDN19Q8N6F1 224 aa6.93□□□□□ -1.3
CTDSPL2-210ENST00000560834 BEND7Q8N7W2 519 aaPredicted RBP6.93□□□□□ -1.3
CTDSPL2-210ENST00000560834 CEP76Q8TAP6 659 aa6.93□□□□□ -1.3
CTDSPL2-210ENST00000560834 GDAP1Q8TB36 358 aa6.93□□□□□ -1.3
CTDSPL2-210ENST00000560834 UBLCP1Q8WVY7 318 aaPredicted RBP6.93□□□□□ -1.3
CTDSPL2-210ENST00000560834 TSACCQ96A04 125 aaPredicted RBP6.93□□□□□ -1.3
CTDSPL2-210ENST00000560834 BIRC8Q96P09 236 aa6.93□□□□□ -1.3
CTDSPL2-210ENST00000560834 TCF12Q99081 682 aa6.93□□□□□ -1.3
CTDSPL2-210ENST00000560834 RBBP8Q99708 897 aa6.93□□□□□ -1.3
CTDSPL2-210ENST00000560834 DHRS4Q9BTZ2 278 aa6.93□□□□□ -1.3
CTDSPL2-210ENST00000560834 LRRC61Q9BV99 259 aa6.93□□□□□ -1.3
CTDSPL2-210ENST00000560834 PARD6AQ9NPB6 346 aa6.93□□□□□ -1.3
CTDSPL2-210ENST00000560834 PPANQ9NQ55 473 aaKnown RBP6.93□□□□□ -1.3
CTDSPL2-210ENST00000560834 GULP1Q9UBP9 304 aa6.93□□□□□ -1.3
CTDSPL2-210ENST00000560834 RAPGEFL1Q9UHV5 662 aa6.93□□□□□ -1.3
CTDSPL2-210ENST00000560834 SUFUQ9UMX1 484 aa6.93□□□□□ -1.3
CTDSPL2-210ENST00000560834 MED16Q9Y2X0 877 aa6.93□□□□□ -1.3
CTDSPL2-210ENST00000560834 PRKAB1Q9Y478 270 aa6.93□□□□□ -1.3
CTDSPL2-210ENST00000560834 ST14Q9Y5Y6 855 aa6.93□□□□□ -1.3
CTDSPL2-210ENST00000560834 DGKBQ9Y6T7 804 aa6.93□□□□□ -1.3
CTDSPL2-210ENST00000560834 CACNA1EQ15878 2313 aa6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 UQCRHLA0A096LP55 91 aa6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 UBA6A0AVT1 1052 aaPredicted RBP6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 LNP1A1A4G5 178 aa6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 IQCF5A8MTL0 148 aa6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 PRMT5O14744 637 aaPredicted RBP6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 SCAMP1O15126 338 aa6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 GRID2O43424 1007 aa6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 PRMT3O60678 531 aa6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 NIPSNAP2O75323 286 aa6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 NDUFS3O75489 264 aa6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 FAM155BO75949 473 aa6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 CDK14O94921 469 aa6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 HAUS5O94927 633 aa6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 AP2A2O94973 939 aa6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 RASGRP1O95267 797 aa6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 ASMTLO95671 621 aa6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 LMNAP02545 664 aaKnown RBP6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 CSF2P04141 144 aa6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 UQCRHP07919 91 aa6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 CELA2BP08218 269 aaPredicted RBP6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 NUDT17P0C025 328 aa6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 ZNF7P17097 686 aaPredicted RBP6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 TGM1P22735 817 aa6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 PMLP29590 882 aa6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 GP5P40197 560 aa6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 GNPDA1P46926 289 aa6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 CD151P48509 253 aa6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 SERPINB4P48594 390 aa6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 HK3P52790 923 aa6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 LIMK2P53671 638 aa6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 CSE1LP55060 971 aaKnown RBP6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 EIF3BP55884 814 aaKnown RBP6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 C21orf59P57076 290 aa6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 TIAL1Q01085 375 aaKnown RBP eCLIP6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 GTF2H3Q13889 308 aa6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 KLHL38Q2WGJ6 581 aa6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 ZNF542PQ5EBM4 170 aa6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 FBXO38Q6PIJ6 1188 aa6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 KANSL1Q7Z3B3 1105 aa6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 STRA8Q7Z7C7 330 aa6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 SDCCAG8Q86SQ7 713 aaPredicted RBP6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 LRRTM4Q86VH4 590 aa6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 ZC3HC1Q86WB0 502 aaKnown RBP6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 LRRC6Q86X45 466 aa6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 GALNT13Q8IUC8 556 aa6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 TRAPPC5Q8IUR0 188 aa6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 CTAGE3PQ8IX95 158 aa6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 KRT222Q8N1A0 295 aa6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 PPM1NQ8N819 430 aa6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 ACVR1CQ8NER5 493 aa6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 OR2I1PQ8NGU4 316 aa6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 GIMAP7Q8NHV1 300 aa6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 GABPB2Q8TAK5 448 aaPredicted RBP6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 HEXDCQ8WVB3 486 aa6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 DCAKDQ8WVC6 231 aa6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 HNRNPLLQ8WVV9 542 aaKnown RBP6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 SLC44A1Q8WWI5 657 aa6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 CDKL2Q92772 493 aa6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 SGF29Q96ES7 293 aa6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 DCUN1D1Q96GG9 259 aa6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 ATXN7L3BQ96GX2 97 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms