RNA–Protein interactions for RNA: ENST00000560730.5

USP8-212, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,449 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-212ENST00000560730 LAMB3Q13751 1172 aa11.86□□□□□ -0.51
USP8-212ENST00000560730 KIR2DS5Q14953 304 aa11.86□□□□□ -0.51
USP8-212ENST00000560730 CLCA4Q14CN2 919 aa11.86□□□□□ -0.51
USP8-212ENST00000560730 BCL7AQ4VC05 210 aa11.86□□□□□ -0.51
USP8-212ENST00000560730 ABRAXAS1Q6UWZ7 409 aa11.86□□□□□ -0.51
USP8-212ENST00000560730 WASH2PQ6VEQ5 465 aa11.86□□□□□ -0.51
USP8-212ENST00000560730 ZNF574Q6ZN55 896 aaPredicted RBP11.86□□□□□ -0.51
USP8-212ENST00000560730 KDF1Q8NAX2 398 aaPredicted RBP11.86□□□□□ -0.51
USP8-212ENST00000560730 OR6P1Q8NGX9 317 aa11.86□□□□□ -0.51
USP8-212ENST00000560730 WDR48Q8TAF3 677 aa11.86□□□□□ -0.51
USP8-212ENST00000560730 ZNF514Q96K75 400 aaPredicted RBP11.86□□□□□ -0.51
USP8-212ENST00000560730 NUDT22Q9BRQ3 303 aa11.86□□□□□ -0.51
USP8-212ENST00000560730 TRIM56Q9BRZ2 755 aaKnown RBP11.86□□□□□ -0.51
USP8-212ENST00000560730 NRSN2Q9GZP1 204 aa11.86□□□□□ -0.51
USP8-212ENST00000560730 IL22Q9GZX6 179 aa11.86□□□□□ -0.51
USP8-212ENST00000560730 WASH6PQ9NQA3 447 aa11.86□□□□□ -0.51
USP8-212ENST00000560730 TREX1Q9NSU2 369 aa11.86□□□□□ -0.51
USP8-212ENST00000560730 MARCH4Q9P2E8 410 aaPredicted RBP11.86□□□□□ -0.51
USP8-212ENST00000560730 PCYOX1Q9UHG3 505 aa11.86□□□□□ -0.51
USP8-212ENST00000560730 PSMD13Q9UNM6 376 aa11.86□□□□□ -0.51
USP8-212ENST00000560730 OR5K4A6NMS3 321 aa11.86□□□□□ -0.51
USP8-212ENST00000560730 AGRPO00253 132 aa11.86□□□□□ -0.51
USP8-212ENST00000560730 OR1I1O60431 355 aa11.86□□□□□ -0.51
USP8-212ENST00000560730 KCNJ13O60928 360 aa11.86□□□□□ -0.51
USP8-212ENST00000560730 MPOP05164 745 aa11.86□□□□□ -0.51
USP8-212ENST00000560730 RALBP11234 206 aa11.86□□□□□ -0.51
USP8-212ENST00000560730 HOXB3P14651 431 aaPredicted RBP11.86□□□□□ -0.51
USP8-212ENST00000560730 SLC2A4P14672 509 aa11.86□□□□□ -0.51
USP8-212ENST00000560730 VCLP18206 1134 aa11.86□□□□□ -0.51
USP8-212ENST00000560730 IVDP26440 423 aa11.86□□□□□ -0.51
USP8-212ENST00000560730 CASQ1P31415 396 aa11.86□□□□□ -0.51
USP8-212ENST00000560730 CSF2RBP32927 897 aa11.86□□□□□ -0.51
USP8-212ENST00000560730 PRLHRP49683 370 aa11.86□□□□□ -0.51
USP8-212ENST00000560730 PTK6Q13882 451 aa11.86□□□□□ -0.51
USP8-212ENST00000560730 RTP5Q14D33 572 aa11.86□□□□□ -0.51
USP8-212ENST00000560730 PPP1R7Q15435 360 aa11.86□□□□□ -0.51
USP8-212ENST00000560730 ZNF658BQ4V348 819 aaPredicted RBP11.86□□□□□ -0.51
USP8-212ENST00000560730 RNASEH2BQ5TBB1 312 aaKnown RBP11.86□□□□□ -0.51
USP8-212ENST00000560730 AGAP9Q5VTM2 703 aa11.86□□□□□ -0.51
USP8-212ENST00000560730 METRNLQ641Q3 311 aa11.86□□□□□ -0.51
USP8-212ENST00000560730 AFTPHQ6ULP2 937 aa11.86□□□□□ -0.51
USP8-212ENST00000560730 SYT10Q6XYQ8 523 aa11.86□□□□□ -0.51
USP8-212ENST00000560730 NLRP9Q7RTR0 991 aa11.86□□□□□ -0.51
USP8-212ENST00000560730 LDB1Q86U70 411 aaPredicted RBP11.86□□□□□ -0.51
USP8-212ENST00000560730 SLC9B2Q86UD5 537 aa11.86□□□□□ -0.51
USP8-212ENST00000560730 AGGF1Q8N302 714 aaeCLIP11.86□□□□□ -0.51
USP8-212ENST00000560730 NAT8LQ8N9F0 302 aa11.86□□□□□ -0.51
USP8-212ENST00000560730 MCUQ8NE86 351 aa11.86□□□□□ -0.51
USP8-212ENST00000560730 OR2L2Q8NH16 312 aa11.86□□□□□ -0.51
USP8-212ENST00000560730 OR4L1Q8NH43 312 aa11.86□□□□□ -0.51
USP8-212ENST00000560730 HEXDCQ8WVB3 486 aa11.86□□□□□ -0.51
USP8-212ENST00000560730 ZCCHC14Q8WYQ9 949 aaKnown RBP11.86□□□□□ -0.51
USP8-212ENST00000560730 SLCO2A1Q92959 643 aa11.86□□□□□ -0.51
USP8-212ENST00000560730 MFSD3Q96ES6 412 aa11.86□□□□□ -0.51
USP8-212ENST00000560730 LINC00615Q96LM1 132 aaPredicted RBP11.86□□□□□ -0.51
USP8-212ENST00000560730 KIFC1Q9BW19 673 aa11.86□□□□□ -0.51
USP8-212ENST00000560730 TBC1D10AQ9BXI6 508 aa11.86□□□□□ -0.51
USP8-212ENST00000560730 SEMA6CQ9H3T2 930 aa11.86□□□□□ -0.51
USP8-212ENST00000560730 CCDC86Q9H6F5 360 aaKnown RBP11.86□□□□□ -0.51
USP8-212ENST00000560730 KCNK4Q9NYG8 393 aa11.86□□□□□ -0.51
USP8-212ENST00000560730 TMEM9Q9P0T7 183 aa11.86□□□□□ -0.51
USP8-212ENST00000560730 SOX13Q9UN79 622 aa11.86□□□□□ -0.51
USP8-212ENST00000560730 AK5Q9Y6K8 562 aa11.86□□□□□ -0.51
USP8-212ENST00000560730 CFAP99D6REC4 459 aa11.85□□□□□ -0.51
USP8-212ENST00000560730 AP3B1O00203 1094 aa11.85□□□□□ -0.51
USP8-212ENST00000560730 POLBP06746 335 aa11.85□□□□□ -0.51
USP8-212ENST00000560730 ARNTP27540 789 aa11.85□□□□□ -0.51
USP8-212ENST00000560730 INHBCP55103 352 aa11.85□□□□□ -0.51
USP8-212ENST00000560730 PRAMEP78395 509 aa11.85□□□□□ -0.51
USP8-212ENST00000560730 SARNPP82979 210 aaKnown RBP11.85□□□□□ -0.51
USP8-212ENST00000560730 ZFP36L1Q07352 338 aaKnown RBP11.85□□□□□ -0.51
USP8-212ENST00000560730 RPE65Q16518 533 aa11.85□□□□□ -0.51
USP8-212ENST00000560730 ST3GAL2Q16842 350 aa11.85□□□□□ -0.51
USP8-212ENST00000560730 C3orf38Q5JPI3 329 aa11.85□□□□□ -0.51
USP8-212ENST00000560730 PIM3Q86V86 326 aa11.85□□□□□ -0.51
USP8-212ENST00000560730 SLITRK4Q8IW52 837 aa11.85□□□□□ -0.51
USP8-212ENST00000560730 SPDYE1Q8NFV5 336 aaPredicted RBP11.85□□□□□ -0.51
USP8-212ENST00000560730 PEX13Q92968 403 aa11.85□□□□□ -0.51
USP8-212ENST00000560730 PRR11Q96HE9 360 aaPredicted RBP11.85□□□□□ -0.51
USP8-212ENST00000560730 SGSM3Q96HU1 749 aa11.85□□□□□ -0.51
USP8-212ENST00000560730 SERPINB12Q96P63 405 aa11.85□□□□□ -0.51
USP8-212ENST00000560730 SLC38A3Q99624 504 aa11.85□□□□□ -0.51
USP8-212ENST00000560730 TRIM51Q9BSJ1 452 aa11.85□□□□□ -0.51
USP8-212ENST00000560730 CCM2Q9BSQ5 444 aa11.85□□□□□ -0.51
USP8-212ENST00000560730 WWP1Q9H0M0 922 aa11.85□□□□□ -0.51
USP8-212ENST00000560730 MRM3Q9HC36 420 aaKnown RBP11.85□□□□□ -0.51
USP8-212ENST00000560730 EPB41L5Q9HCM4 733 aa11.85□□□□□ -0.51
USP8-212ENST00000560730 ASIC3Q9UHC3 531 aa11.85□□□□□ -0.51
USP8-212ENST00000560730 ZMIZ1Q9ULJ6 1067 aa11.85□□□□□ -0.51
USP8-212ENST00000560730 SATB2Q9UPW6 733 aa11.85□□□□□ -0.51
USP8-212ENST00000560730 CFAP20Q9Y6A4 193 aaKnown RBP11.85□□□□□ -0.51
USP8-212ENST00000560730 CACNA1BQ00975 2339 aa11.84□□□□□ -0.51
USP8-212ENST00000560730 TMEM8BA6NDV4 472 aa11.84□□□□□ -0.51
USP8-212ENST00000560730 GOLGA8KD6RF30 607 aa11.84□□□□□ -0.51
USP8-212ENST00000560730 GOLGA8TH3BQL2 631 aa11.84□□□□□ -0.51
USP8-212ENST00000560730 TTI1O43156 1089 aa11.84□□□□□ -0.51
USP8-212ENST00000560730 BRINP1O60477 761 aa11.84□□□□□ -0.51
USP8-212ENST00000560730 VAPBO95292 243 aa11.84□□□□□ -0.51
USP8-212ENST00000560730 CPNE6O95741 557 aa11.84□□□□□ -0.51
USP8-212ENST00000560730 VIPP01282 170 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms