RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 LINGO4Q6UY18 593 aa9.58□□□□□ -0.88
RTF1-206ENST00000560447 TPGS1Q6ZTW0 290 aa9.58□□□□□ -0.88
RTF1-206ENST00000560447 TPRG1Q6ZUI0 275 aa9.58□□□□□ -0.88
RTF1-206ENST00000560447 USP45Q70EL2 814 aa9.58□□□□□ -0.88
RTF1-206ENST00000560447 SPATA24Q86W54 205 aa9.58□□□□□ -0.88
RTF1-206ENST00000560447 RAVER1Q8IY67 606 aaKnown RBP9.58□□□□□ -0.88
RTF1-206ENST00000560447 CPNE9Q8IYJ1 553 aa9.58□□□□□ -0.88
RTF1-206ENST00000560447 ST13P4Q8IZP2 240 aaPredicted RBP9.58□□□□□ -0.88
RTF1-206ENST00000560447 FAM9CQ8IZT9 166 aa9.58□□□□□ -0.88
RTF1-206ENST00000560447 TCAIMQ8N3R3 496 aa9.58□□□□□ -0.88
RTF1-206ENST00000560447 TMEM199Q8N511 208 aa9.58□□□□□ -0.88
RTF1-206ENST00000560447 FIBCD1Q8N539 461 aa9.58□□□□□ -0.88
RTF1-206ENST00000560447 PACRGLQ8N7B6 248 aa9.58□□□□□ -0.88
RTF1-206ENST00000560447 SIDT2Q8NBJ9 832 aaKnown RBP9.58□□□□□ -0.88
RTF1-206ENST00000560447 SHKBP1Q8TBC3 707 aa9.58□□□□□ -0.88
RTF1-206ENST00000560447 EEF1AKMT1Q8WVE0 214 aa9.58□□□□□ -0.88
RTF1-206ENST00000560447 OTUB2Q96DC9 234 aa9.58□□□□□ -0.88
RTF1-206ENST00000560447 DCUN1D1Q96GG9 259 aa9.58□□□□□ -0.88
RTF1-206ENST00000560447 SLC22A12Q96S37 553 aa9.58□□□□□ -0.88
RTF1-206ENST00000560447 TUBB1Q9H4B7 451 aa9.58□□□□□ -0.88
RTF1-206ENST00000560447 ASB8Q9H765 288 aa9.58□□□□□ -0.88
RTF1-206ENST00000560447 SEMA4BQ9NPR2 832 aaPredicted RBP9.58□□□□□ -0.88
RTF1-206ENST00000560447 KCTD5Q9NXV2 234 aa9.58□□□□□ -0.88
RTF1-206ENST00000560447 ASIC5Q9NY37 505 aa9.58□□□□□ -0.88
RTF1-206ENST00000560447 DLGAP2Q9P1A6 1054 aa9.58□□□□□ -0.88
RTF1-206ENST00000560447 CFAP97Q9P2B7 532 aa9.58□□□□□ -0.88
RTF1-206ENST00000560447 NFKBIL1Q9UBC1 381 aaPredicted RBP9.58□□□□□ -0.88
RTF1-206ENST00000560447 SUN2Q9UH99 717 aa9.58□□□□□ -0.88
RTF1-206ENST00000560447 SLC25A13Q9UJS0 675 aa9.58□□□□□ -0.88
RTF1-206ENST00000560447 LEF1Q9UJU2 399 aaPredicted RBP9.58□□□□□ -0.88
RTF1-206ENST00000560447 PTBP2Q9UKA9 531 aaKnown RBP9.58□□□□□ -0.88
RTF1-206ENST00000560447 AP4S1Q9Y587 144 aa9.58□□□□□ -0.88
RTF1-206ENST00000560447 C1orf232A0A0U1RR37 186 aa9.57□□□□□ -0.88
RTF1-206ENST00000560447 WASH3PC4AMC7 463 aa9.57□□□□□ -0.88
RTF1-206ENST00000560447 LEFTY2O00292 366 aa9.57□□□□□ -0.88
RTF1-206ENST00000560447 ARNTLO00327 626 aa9.57□□□□□ -0.88
RTF1-206ENST00000560447 SLC28A1O00337 649 aa9.57□□□□□ -0.88
RTF1-206ENST00000560447 NR5A2O00482 541 aa9.57□□□□□ -0.88
RTF1-206ENST00000560447 KPNA5O15131 536 aa9.57□□□□□ -0.88
RTF1-206ENST00000560447 FFAR2O15552 330 aa9.57□□□□□ -0.88
RTF1-206ENST00000560447 TGM5O43548 720 aa9.57□□□□□ -0.88
RTF1-206ENST00000560447 OR1I1O60431 355 aa9.57□□□□□ -0.88
RTF1-206ENST00000560447 GFRA3O60609 400 aa9.57□□□□□ -0.88
RTF1-206ENST00000560447 FGF18O76093 207 aa9.57□□□□□ -0.88
RTF1-206ENST00000560447 POP4O95707 220 aaKnown RBP9.57□□□□□ -0.88
RTF1-206ENST00000560447 GPIP06744 558 aa9.57□□□□□ -0.88
RTF1-206ENST00000560447 POU2F2P09086 479 aa9.57□□□□□ -0.88
RTF1-206ENST00000560447 UMPSP11172 480 aa9.57□□□□□ -0.88
RTF1-206ENST00000560447 FCGR1AP12314 374 aa9.57□□□□□ -0.88
RTF1-206ENST00000560447 ZNF30P17039 623 aa9.57□□□□□ -0.88
RTF1-206ENST00000560447 HOXB6P17509 224 aaKnown RBP9.57□□□□□ -0.88
RTF1-206ENST00000560447 HOXA9P31269 272 aa9.57□□□□□ -0.88
RTF1-206ENST00000560447 HNF1BP35680 557 aa9.57□□□□□ -0.88
RTF1-206ENST00000560447 CDKN1CP49918 316 aaPredicted RBP9.57□□□□□ -0.88
RTF1-206ENST00000560447 HK3P52790 923 aa9.57□□□□□ -0.88
RTF1-206ENST00000560447 AQP4P55087 323 aa9.57□□□□□ -0.88
RTF1-206ENST00000560447 POLR2LP62875 67 aaKnown RBP9.57□□□□□ -0.88
RTF1-206ENST00000560447 HTRA4P83105 476 aaPredicted RBP9.57□□□□□ -0.88
RTF1-206ENST00000560447 EMX2Q04743 252 aa9.57□□□□□ -0.88
RTF1-206ENST00000560447 ZNF33BQ06732 778 aa9.57□□□□□ -0.88
RTF1-206ENST00000560447 GRB7Q14451 532 aa9.57□□□□□ -0.88
RTF1-206ENST00000560447 INPP5AQ14642 412 aa9.57□□□□□ -0.88
RTF1-206ENST00000560447 RBBP7Q16576 425 aa9.57□□□□□ -0.88
RTF1-206ENST00000560447 AASDHQ4L235 1098 aaPredicted RBP9.57□□□□□ -0.88
RTF1-206ENST00000560447 ATP6AP1LQ52LC2 224 aa9.57□□□□□ -0.88
RTF1-206ENST00000560447 ATXN7L2Q5T6C5 722 aaPredicted RBP9.57□□□□□ -0.88
RTF1-206ENST00000560447 GPRC6AQ5T6X5 926 aa9.57□□□□□ -0.88
RTF1-206ENST00000560447 LPCAT4Q643R3 524 aa9.57□□□□□ -0.88
RTF1-206ENST00000560447 OR52E8Q6IFG1 317 aa9.57□□□□□ -0.88
RTF1-206ENST00000560447 C22orf39Q6P5X5 142 aa9.57□□□□□ -0.88
RTF1-206ENST00000560447 RPS27LQ71UM5 84 aaKnown RBP9.57□□□□□ -0.88
RTF1-206ENST00000560447 GAREM2Q75VX8 874 aa9.57□□□□□ -0.88
RTF1-206ENST00000560447 SYVN1Q86TM6 617 aa9.57□□□□□ -0.88
RTF1-206ENST00000560447 DHFR2Q86XF0 187 aa9.57□□□□□ -0.88
RTF1-206ENST00000560447 PTRH1Q86Y79 214 aaKnown RBP9.57□□□□□ -0.88
RTF1-206ENST00000560447 APCDD1Q8J025 514 aa9.57□□□□□ -0.88
RTF1-206ENST00000560447 NXPE1Q8N323 547 aa9.57□□□□□ -0.88
RTF1-206ENST00000560447 AADATQ8N5Z0 425 aa9.57□□□□□ -0.88
RTF1-206ENST00000560447 DPP10Q8N608 796 aa9.57□□□□□ -0.88
RTF1-206ENST00000560447 ZBTB2Q8N680 514 aa9.57□□□□□ -0.88
RTF1-206ENST00000560447 TMEM102Q8N9M5 508 aaPredicted RBP9.57□□□□□ -0.88
RTF1-206ENST00000560447 HIPK4Q8NE63 616 aa9.57□□□□□ -0.88
RTF1-206ENST00000560447 OR2T34Q8NGX1 318 aa9.57□□□□□ -0.88
RTF1-206ENST00000560447 OR2T3Q8NH03 318 aa9.57□□□□□ -0.88
RTF1-206ENST00000560447 DNAJB8Q8NHS0 232 aa9.57□□□□□ -0.88
RTF1-206ENST00000560447 WFDC5Q8TCV5 224 aa9.57□□□□□ -0.88
RTF1-206ENST00000560447 HCAR2Q8TDS4 363 aa9.57□□□□□ -0.88
RTF1-206ENST00000560447 CLP1Q92989 425 aaKnown RBP9.57□□□□□ -0.88
RTF1-206ENST00000560447 LRRC58Q96CX6 371 aa9.57□□□□□ -0.88
RTF1-206ENST00000560447 SPDL1Q96EA4 605 aa9.57□□□□□ -0.88
RTF1-206ENST00000560447 SCRN2Q96FV2 425 aa9.57□□□□□ -0.88
RTF1-206ENST00000560447 PPP3R2Q96LZ3 170 aa9.57□□□□□ -0.88
RTF1-206ENST00000560447 NSUN5Q96P11 429 aaKnown RBP9.57□□□□□ -0.88
RTF1-206ENST00000560447 YME1L1Q96TA2 773 aa9.57□□□□□ -0.88
RTF1-206ENST00000560447 SLC30A3Q99726 388 aa9.57□□□□□ -0.88
RTF1-206ENST00000560447 SLC2A11Q9BYW1 496 aa9.57□□□□□ -0.88
RTF1-206ENST00000560447 SLC29A3Q9BZD2 475 aa9.57□□□□□ -0.88
RTF1-206ENST00000560447 EPB41L1Q9H4G0 881 aa9.57□□□□□ -0.88
RTF1-206ENST00000560447 EBF3Q9H4W6 596 aa9.57□□□□□ -0.88
RTF1-206ENST00000560447 BPIFA1Q9NP55 256 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms