RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 RGS19P49795 217 aa3.63□□□□□ -1.83
SPG11-218ENST00000559754 LIG4P49917 911 aa3.63□□□□□ -1.83
SPG11-218ENST00000559754 METAP2P50579 478 aaKnown RBP eCLIP3.63□□□□□ -1.83
SPG11-218ENST00000559754 CLCN3P51790 818 aa3.63□□□□□ -1.83
SPG11-218ENST00000559754 CSTF3Q12996 717 aaKnown RBP3.63□□□□□ -1.83
SPG11-218ENST00000559754 GRIK3Q13003 919 aa3.63□□□□□ -1.83
SPG11-218ENST00000559754 E2F5Q15329 346 aa3.63□□□□□ -1.83
SPG11-218ENST00000559754 CRY2Q49AN0 593 aa3.63□□□□□ -1.83
SPG11-218ENST00000559754 KRTCAP3Q53RY4 240 aa3.63□□□□□ -1.83
SPG11-218ENST00000559754 SGO1Q5FBB7 561 aa3.63□□□□□ -1.83
SPG11-218ENST00000559754 RGMBQ6NW40 437 aa3.63□□□□□ -1.83
SPG11-218ENST00000559754 ANKRD54Q6NXT1 300 aa3.63□□□□□ -1.83
SPG11-218ENST00000559754 IYDQ6PHW0 289 aa3.63□□□□□ -1.83
SPG11-218ENST00000559754 PET117Q6UWS5 81 aa3.63□□□□□ -1.83
SPG11-218ENST00000559754 MARK2Q7KZI7 788 aaKnown RBP3.63□□□□□ -1.83
SPG11-218ENST00000559754 SLC26A9Q7LBE3 791 aa3.63□□□□□ -1.83
SPG11-218ENST00000559754 PLPPR4Q7Z2D5 763 aa3.63□□□□□ -1.83
SPG11-218ENST00000559754 SLC46A3Q7Z3Q1 461 aa3.63□□□□□ -1.83
SPG11-218ENST00000559754 NFE4Q86UQ8 179 aa3.63□□□□□ -1.83
SPG11-218ENST00000559754 LINC00346Q8IVM7 164 aa3.63□□□□□ -1.83
SPG11-218ENST00000559754 HSCBQ8IWL3 235 aa3.63□□□□□ -1.83
SPG11-218ENST00000559754 CHERPQ8IWX8 916 aaKnown RBP3.63□□□□□ -1.83
SPG11-218ENST00000559754 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.63□□□□□ -1.83
SPG11-218ENST00000559754 CCDC170Q8IYT3 715 aa3.63□□□□□ -1.83
SPG11-218ENST00000559754 RNF113BQ8IZP6 322 aaKnown RBP3.63□□□□□ -1.83
SPG11-218ENST00000559754 ARL6IP6Q8N6S5 226 aa3.63□□□□□ -1.83
SPG11-218ENST00000559754 KBTBD3Q8NAB2 608 aa3.63□□□□□ -1.83
SPG11-218ENST00000559754 CADM4Q8NFZ8 388 aa3.63□□□□□ -1.83
SPG11-218ENST00000559754 DUSP19Q8WTR2 217 aa3.63□□□□□ -1.83
SPG11-218ENST00000559754 RND1Q92730 232 aa3.63□□□□□ -1.83
SPG11-218ENST00000559754 SAT2Q96F10 170 aaPredicted RBP3.63□□□□□ -1.83
SPG11-218ENST00000559754 ABHD1Q96SE0 405 aa3.63□□□□□ -1.83
SPG11-218ENST00000559754 TRMT61BQ9BVS5 477 aaKnown RBP3.63□□□□□ -1.83
SPG11-218ENST00000559754 ESRP2Q9H6T0 727 aaKnown RBP3.63□□□□□ -1.83
SPG11-218ENST00000559754 COPS7BQ9H9Q2 264 aaPredicted RBP3.63□□□□□ -1.83
SPG11-218ENST00000559754 SCPEP1Q9HB40 452 aa3.63□□□□□ -1.83
SPG11-218ENST00000559754 LRRC4Q9HBW1 653 aa3.63□□□□□ -1.83
SPG11-218ENST00000559754 FBRSL1Q9HCM7 1045 aaKnown RBP3.63□□□□□ -1.83
SPG11-218ENST00000559754 KLHL1Q9NR64 748 aa3.63□□□□□ -1.83
SPG11-218ENST00000559754 ADPRHL2Q9NX46 363 aa3.63□□□□□ -1.83
SPG11-218ENST00000559754 SEC63Q9UGP8 760 aaKnown RBP3.63□□□□□ -1.83
SPG11-218ENST00000559754 TINAGQ9UJW2 476 aa3.63□□□□□ -1.83
SPG11-218ENST00000559754 KIF26BQ2KJY2 2108 aa3.62□□□□□ -1.83
SPG11-218ENST00000559754 A0A1W2PRG0 241 aa3.62□□□□□ -1.83
SPG11-218ENST00000559754 OR2A25A4D2G3 310 aa3.62□□□□□ -1.83
SPG11-218ENST00000559754 LILRA5A6NI73 299 aa3.62□□□□□ -1.83
SPG11-218ENST00000559754 EIF3CLB5ME19 914 aaKnown RBP3.62□□□□□ -1.83
SPG11-218ENST00000559754 CAPN9O14815 690 aa3.62□□□□□ -1.83
SPG11-218ENST00000559754 FMO6PO60774 539 aa3.62□□□□□ -1.83
SPG11-218ENST00000559754 TACC1O75410 805 aa3.62□□□□□ -1.83
SPG11-218ENST00000559754 G6PDP11413 515 aa3.62□□□□□ -1.83
SPG11-218ENST00000559754 GABRB1P18505 474 aa3.62□□□□□ -1.83
SPG11-218ENST00000559754 EDN2P20800 178 aa3.62□□□□□ -1.83
SPG11-218ENST00000559754 SP100P23497 879 aaPredicted RBP3.62□□□□□ -1.83
SPG11-218ENST00000559754 HOXA13P31271 388 aaPredicted RBP3.62□□□□□ -1.83
SPG11-218ENST00000559754 EIF2S3P41091 472 aaKnown RBP3.62□□□□□ -1.83
SPG11-218ENST00000559754 SLC15A1P46059 708 aa3.62□□□□□ -1.83
SPG11-218ENST00000559754 STAT2P52630 851 aa3.62□□□□□ -1.83
SPG11-218ENST00000559754 CRIP2P52943 208 aaPredicted RBP3.62□□□□□ -1.83
SPG11-218ENST00000559754 RNPS1Q15287 305 aaKnown RBP3.62□□□□□ -1.83
SPG11-218ENST00000559754 DNAJC21Q5F1R6 531 aaKnown RBP3.62□□□□□ -1.83
SPG11-218ENST00000559754 GKAP1Q5VSY0 366 aaPredicted RBP3.62□□□□□ -1.83
SPG11-218ENST00000559754 TXNDC8Q6A555 127 aa3.62□□□□□ -1.83
SPG11-218ENST00000559754 JADE1Q6IE81 842 aa3.62□□□□□ -1.83
SPG11-218ENST00000559754 CNSTQ6PJW8 725 aa3.62□□□□□ -1.83
SPG11-218ENST00000559754 SLC9B2Q86UD5 537 aa3.62□□□□□ -1.83
SPG11-218ENST00000559754 WDR63Q8IWG1 891 aa3.62□□□□□ -1.83
SPG11-218ENST00000559754 DHX40Q8IX18 779 aaKnown RBP3.62□□□□□ -1.83
SPG11-218ENST00000559754 ODF3L1Q8IXM7 274 aa3.62□□□□□ -1.83
SPG11-218ENST00000559754 ZBTB2Q8N680 514 aa3.62□□□□□ -1.83
SPG11-218ENST00000559754 SPC24Q8NBT2 197 aa3.62□□□□□ -1.83
SPG11-218ENST00000559754 SIPA1Q96FS4 1042 aa3.62□□□□□ -1.83
SPG11-218ENST00000559754 C1orf74Q96LT6 269 aa3.62□□□□□ -1.83
SPG11-218ENST00000559754 WDFY2Q96P53 400 aa3.62□□□□□ -1.83
SPG11-218ENST00000559754 SPAG5Q96R06 1193 aa3.62□□□□□ -1.83
SPG11-218ENST00000559754 H2AFJQ9BTM1 129 aa3.62□□□□□ -1.83
SPG11-218ENST00000559754 THUMPD3Q9BV44 507 aaKnown RBP3.62□□□□□ -1.83
SPG11-218ENST00000559754 OPA3Q9H6K4 179 aa3.62□□□□□ -1.83
SPG11-218ENST00000559754 POLR1BQ9H9Y6 1135 aa3.62□□□□□ -1.83
SPG11-218ENST00000559754 C20orf141Q9NUB4 165 aa3.62□□□□□ -1.83
SPG11-218ENST00000559754 TMEM30AQ9NV96 361 aa3.62□□□□□ -1.83
SPG11-218ENST00000559754 HSPB7Q9UBY9 170 aa3.62□□□□□ -1.83
SPG11-218ENST00000559754 ANAPC2Q9UJX6 822 aa3.62□□□□□ -1.83
SPG11-218ENST00000559754 INTS6Q9UL03 887 aaKnown RBP3.62□□□□□ -1.83
SPG11-218ENST00000559754 TMCC3Q9ULS5 477 aa3.62□□□□□ -1.83
SPG11-218ENST00000559754 TTC7AQ9ULT0 858 aaPredicted RBP3.62□□□□□ -1.83
SPG11-218ENST00000559754 PPIEQ9UNP9 301 aaKnown RBP3.62□□□□□ -1.83
SPG11-218ENST00000559754 GAB2Q9UQC2 676 aa3.62□□□□□ -1.83
SPG11-218ENST00000559754 LSM4Q9Y4Z0 139 aaKnown RBP3.62□□□□□ -1.83
SPG11-218ENST00000559754 TRPV2Q9Y5S1 764 aa3.62□□□□□ -1.83
SPG11-218ENST00000559754 CAPN7Q9Y6W3 813 aa3.62□□□□□ -1.83
SPG11-218ENST00000559754 ZNF644Q9H582 1327 aaPredicted RBP3.62□□□□□ -1.83
SPG11-218ENST00000559754 LOC100509620A0A075B734 347 aa3.61□□□□□ -1.83
SPG11-218ENST00000559754 TCRBV21S2A2A0A5A6 115 aa3.61□□□□□ -1.83
SPG11-218ENST00000559754 LRRC53A6NM62 1247 aa3.61□□□□□ -1.83
SPG11-218ENST00000559754 RTCAO00442 366 aaKnown RBP3.61□□□□□ -1.83
SPG11-218ENST00000559754 PSMD14O00487 310 aa3.61□□□□□ -1.83
SPG11-218ENST00000559754 STX6O43752 255 aa3.61□□□□□ -1.83
SPG11-218ENST00000559754 SYNCRIPO60506 623 aaKnown RBP3.61□□□□□ -1.83
SPG11-218ENST00000559754 IPO7O95373 1038 aaKnown RBP3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms