RNA–Protein interactions for RNA: ENST00000559276.5

USP3-212, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-212ENST00000559276 KCNK4Q9NYG8 393 aa5.84□□□□□ -1.47
USP3-212ENST00000559276 NCKIPSDQ9NZQ3 722 aa5.84□□□□□ -1.47
USP3-212ENST00000559276 NKX1-2Q9UD57 310 aaPredicted RBP5.84□□□□□ -1.47
USP3-212ENST00000559276 IPO11Q9UI26 975 aaKnown RBP5.84□□□□□ -1.47
USP3-212ENST00000559276 FZD10Q9ULW2 581 aa5.84□□□□□ -1.47
USP3-212ENST00000559276 OR1A2Q9Y585 309 aa5.84□□□□□ -1.47
USP3-212ENST00000559276 COL6A6A6NMZ7 2263 aa5.83□□□□□ -1.48
USP3-212ENST00000559276 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.83□□□□□ -1.48
USP3-212ENST00000559276 CCDC187A0A096LP49 1063 aa5.83□□□□□ -1.48
USP3-212ENST00000559276 TMEM202A6NGA9 273 aa5.83□□□□□ -1.48
USP3-212ENST00000559276 B8ZZF3 427 aa5.83□□□□□ -1.48
USP3-212ENST00000559276 D6RAR5 112 aa5.83□□□□□ -1.48
USP3-212ENST00000559276 J3QKU1 62 aa5.83□□□□□ -1.48
USP3-212ENST00000559276 TOR1BO14657 336 aa5.83□□□□□ -1.48
USP3-212ENST00000559276 GSC2O15499 205 aa5.83□□□□□ -1.48
USP3-212ENST00000559276 ATMINO43313 823 aaPredicted RBP5.83□□□□□ -1.48
USP3-212ENST00000559276 CIB2O75838 187 aa5.83□□□□□ -1.48
USP3-212ENST00000559276 TNFSF15O95150 251 aa5.83□□□□□ -1.48
USP3-212ENST00000559276 FUCA1P04066 466 aa5.83□□□□□ -1.48
USP3-212ENST00000559276 ANXA6P08133 673 aa5.83□□□□□ -1.48
USP3-212ENST00000559276 ITGA2BP08514 1039 aa5.83□□□□□ -1.48
USP3-212ENST00000559276 ESRRAP11474 423 aaPredicted RBP5.83□□□□□ -1.48
USP3-212ENST00000559276 KRT3P12035 628 aa5.83□□□□□ -1.48
USP3-212ENST00000559276 C6P13671 934 aa5.83□□□□□ -1.48
USP3-212ENST00000559276 WT1P19544 449 aaPredicted RBP5.83□□□□□ -1.48
USP3-212ENST00000559276 GPD1P21695 349 aa5.83□□□□□ -1.48
USP3-212ENST00000559276 RBMS1P29558 406 aaKnown RBP5.83□□□□□ -1.48
USP3-212ENST00000559276 SLC5A2P31639 672 aa5.83□□□□□ -1.48
USP3-212ENST00000559276 RPA3P35244 121 aaPredicted RBP5.83□□□□□ -1.48
USP3-212ENST00000559276 UGT1A5P35504 534 aa5.83□□□□□ -1.48
USP3-212ENST00000559276 MMP12P39900 470 aa5.83□□□□□ -1.48
USP3-212ENST00000559276 ARSEP51690 589 aa5.83□□□□□ -1.48
USP3-212ENST00000559276 ZNF143P52747 638 aaPredicted RBP5.83□□□□□ -1.48
USP3-212ENST00000559276 ARFIP2P53365 341 aa5.83□□□□□ -1.48
USP3-212ENST00000559276 YBEYP58557 167 aaPredicted RBP5.83□□□□□ -1.48
USP3-212ENST00000559276 SRP54P61011 504 aaKnown RBP5.83□□□□□ -1.48
USP3-212ENST00000559276 AP2B1P63010 937 aa5.83□□□□□ -1.48
USP3-212ENST00000559276 PPARDQ03181 441 aa5.83□□□□□ -1.48
USP3-212ENST00000559276 ZFP36L1Q07352 338 aaKnown RBP5.83□□□□□ -1.48
USP3-212ENST00000559276 PTK2BQ14289 1009 aa5.83□□□□□ -1.48
USP3-212ENST00000559276 PIGHQ14442 188 aaPredicted RBP5.83□□□□□ -1.48
USP3-212ENST00000559276 NFATC4Q14934 902 aa5.83□□□□□ -1.48
USP3-212ENST00000559276 RCN1Q15293 331 aa5.83□□□□□ -1.48
USP3-212ENST00000559276 OASLQ15646 514 aaKnown RBP5.83□□□□□ -1.48
USP3-212ENST00000559276 CA9Q16790 459 aa5.83□□□□□ -1.48
USP3-212ENST00000559276 UGP2Q16851 508 aa5.83□□□□□ -1.48
USP3-212ENST00000559276 TFDP3Q5H9I0 405 aa5.83□□□□□ -1.48
USP3-212ENST00000559276 SH2D4BQ5SQS7 431 aa5.83□□□□□ -1.48
USP3-212ENST00000559276 UBAP2Q5T6F2 1119 aaKnown RBP5.83□□□□□ -1.48
USP3-212ENST00000559276 LGSNQ5TDP6 509 aa5.83□□□□□ -1.48
USP3-212ENST00000559276 FAXCQ5TGI0 409 aa5.83□□□□□ -1.48
USP3-212ENST00000559276 BROXQ5VW32 411 aa5.83□□□□□ -1.48
USP3-212ENST00000559276 AFMIDQ63HM1 303 aa5.83□□□□□ -1.48
USP3-212ENST00000559276 ATG16L1Q676U5 607 aa5.83□□□□□ -1.48
USP3-212ENST00000559276 OGFOD3Q6PK18 319 aa5.83□□□□□ -1.48
USP3-212ENST00000559276 LVRNQ6Q4G3 990 aa5.83□□□□□ -1.48
USP3-212ENST00000559276 C4orf22Q6V702 233 aa5.83□□□□□ -1.48
USP3-212ENST00000559276 ARHGAP36Q6ZRI8 547 aa5.83□□□□□ -1.48
USP3-212ENST00000559276 CAMK1DQ8IU85 385 aa5.83□□□□□ -1.48
USP3-212ENST00000559276 HID1Q8IV36 788 aa5.83□□□□□ -1.48
USP3-212ENST00000559276 ARHGAP12Q8IWW6 846 aa5.83□□□□□ -1.48
USP3-212ENST00000559276 TP53INP2Q8IXH6 220 aa5.83□□□□□ -1.48
USP3-212ENST00000559276 SDR16C5Q8N3Y7 309 aa5.83□□□□□ -1.48
USP3-212ENST00000559276 ARL10Q8N8L6 244 aa5.83□□□□□ -1.48
USP3-212ENST00000559276 BANPQ8N9N5 519 aa5.83□□□□□ -1.48
USP3-212ENST00000559276 DRAXINQ8NBI3 349 aaPredicted RBP5.83□□□□□ -1.48
USP3-212ENST00000559276 GPR156Q8NFN8 814 aa5.83□□□□□ -1.48
USP3-212ENST00000559276 CCL4L1Q8NHW4 92 aa5.83□□□□□ -1.48
USP3-212ENST00000559276 CCDC110Q8TBZ0 833 aa5.83□□□□□ -1.48
USP3-212ENST00000559276 HCAR2Q8TDS4 363 aa5.83□□□□□ -1.48
USP3-212ENST00000559276 CXorf40AQ8TE69 158 aa5.83□□□□□ -1.48
USP3-212ENST00000559276 PTCD2Q8WV60 388 aaKnown RBP5.83□□□□□ -1.48
USP3-212ENST00000559276 ATG4AQ8WYN0 398 aa5.83□□□□□ -1.48
USP3-212ENST00000559276 OR1E3Q8WZA6 343 aa5.83□□□□□ -1.48
USP3-212ENST00000559276 NAT6Q93015 286 aa5.83□□□□□ -1.48
USP3-212ENST00000559276 ECHDC3Q96DC8 303 aa5.83□□□□□ -1.48
USP3-212ENST00000559276 PDXPQ96GD0 296 aa5.83□□□□□ -1.48
USP3-212ENST00000559276 APOPT1Q96IL0 206 aa5.83□□□□□ -1.48
USP3-212ENST00000559276 C9orf72Q96LT7 481 aa5.83□□□□□ -1.48
USP3-212ENST00000559276 GBP5Q96PP8 586 aa5.83□□□□□ -1.48
USP3-212ENST00000559276 PEBP4Q96S96 227 aa5.83□□□□□ -1.48
USP3-212ENST00000559276 CYTH2Q99418 400 aa5.83□□□□□ -1.48
USP3-212ENST00000559276 PAIP2Q9BPZ3 127 aaKnown RBP5.83□□□□□ -1.48
USP3-212ENST00000559276 FAM167BQ9BTA0 163 aa5.83□□□□□ -1.48
USP3-212ENST00000559276 APOOQ9BUR5 198 aa5.83□□□□□ -1.48
USP3-212ENST00000559276 TSSK1BQ9BXA7 367 aa5.83□□□□□ -1.48
USP3-212ENST00000559276 LGR4Q9BXB1 951 aa5.83□□□□□ -1.48
USP3-212ENST00000559276 CADM1Q9BY67 442 aaKnown RBP5.83□□□□□ -1.48
USP3-212ENST00000559276 SLC13A1Q9BZW2 595 aa5.83□□□□□ -1.48
USP3-212ENST00000559276 SLC39A8Q9C0K1 460 aa5.83□□□□□ -1.48
USP3-212ENST00000559276 WWP1Q9H0M0 922 aa5.83□□□□□ -1.48
USP3-212ENST00000559276 MANSC1Q9H8J5 431 aa5.83□□□□□ -1.48
USP3-212ENST00000559276 VPS37BQ9H9H4 285 aa5.83□□□□□ -1.48
USP3-212ENST00000559276 FGF22Q9HCT0 170 aa5.83□□□□□ -1.48
USP3-212ENST00000559276 MRPL40Q9NQ50 206 aaKnown RBP5.83□□□□□ -1.48
USP3-212ENST00000559276 SIRPGQ9P1W8 387 aa5.83□□□□□ -1.48
USP3-212ENST00000559276 TBK1Q9UHD2 729 aa5.83□□□□□ -1.48
USP3-212ENST00000559276 ZNF180Q9UJW8 692 aa5.83□□□□□ -1.48
USP3-212ENST00000559276 ACSL6Q9UKU0 697 aa5.83□□□□□ -1.48
USP3-212ENST00000559276 ATXN7L1Q9ULK2 861 aaPredicted RBP5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms