RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 RHDQ02161 417 aa11.13□□□□□ -0.63
CLPX-204ENST00000559152 PPIGQ13427 754 aaKnown RBP eCLIP11.13□□□□□ -0.63
CLPX-204ENST00000559152 MED21Q13503 144 aa11.13□□□□□ -0.63
CLPX-204ENST00000559152 GTF2H2Q13888 395 aa11.13□□□□□ -0.63
CLPX-204ENST00000559152 ADGRE1Q14246 886 aa11.13□□□□□ -0.63
CLPX-204ENST00000559152 ATP6AP1LQ52LC2 224 aa11.13□□□□□ -0.63
CLPX-204ENST00000559152 CDKL4Q5MAI5 379 aa11.13□□□□□ -0.63
CLPX-204ENST00000559152 GPRC6AQ5T6X5 926 aa11.13□□□□□ -0.63
CLPX-204ENST00000559152 IRAK1BP1Q5VVH5 260 aa11.13□□□□□ -0.63
CLPX-204ENST00000559152 LPCAT4Q643R3 524 aa11.13□□□□□ -0.63
CLPX-204ENST00000559152 GTF2H2CQ6P1K8 395 aa11.13□□□□□ -0.63
CLPX-204ENST00000559152 FBXO46Q6PJ61 603 aaPredicted RBP11.13□□□□□ -0.63
CLPX-204ENST00000559152 BLOC1S3Q6QNY0 202 aa11.13□□□□□ -0.63
CLPX-204ENST00000559152 METTL6Q8TCB7 284 aa11.13□□□□□ -0.63
CLPX-204ENST00000559152 IRF7Q92985 503 aa11.13□□□□□ -0.63
CLPX-204ENST00000559152 ATP6V1E2Q96A05 226 aa11.13□□□□□ -0.63
CLPX-204ENST00000559152 OTUB2Q96DC9 234 aa11.13□□□□□ -0.63
CLPX-204ENST00000559152 DUS3LQ96G46 650 aaKnown RBP11.13□□□□□ -0.63
CLPX-204ENST00000559152 RPL10LQ96L21 214 aaKnown RBP11.13□□□□□ -0.63
CLPX-204ENST00000559152 COPS8Q99627 209 aa11.13□□□□□ -0.63
CLPX-204ENST00000559152 GPATCH1Q9BRR8 931 aaKnown RBP11.13□□□□□ -0.63
CLPX-204ENST00000559152 BRINP2Q9C0B6 783 aa11.13□□□□□ -0.63
CLPX-204ENST00000559152 NOL11Q9H8H0 719 aaKnown RBP11.13□□□□□ -0.63
CLPX-204ENST00000559152 TDP1Q9NUW8 608 aa11.13□□□□□ -0.63
CLPX-204ENST00000559152 KCTD5Q9NXV2 234 aa11.13□□□□□ -0.63
CLPX-204ENST00000559152 ZIM2Q9NZV7 527 aa11.13□□□□□ -0.63
CLPX-204ENST00000559152 SUN2Q9UH99 717 aa11.13□□□□□ -0.63
CLPX-204ENST00000559152 DTNAQ9Y4J8 743 aa11.13□□□□□ -0.63
CLPX-204ENST00000559152 A0A1W2PP18 115 aa11.12□□□□□ -0.63
CLPX-204ENST00000559152 GPR39O43194 453 aa11.12□□□□□ -0.63
CLPX-204ENST00000559152 NPPAP01160 153 aa11.12□□□□□ -0.63
CLPX-204ENST00000559152 ARSAP15289 507 aa11.12□□□□□ -0.63
CLPX-204ENST00000559152 TCN1P20061 433 aaPredicted RBP11.12□□□□□ -0.63
CLPX-204ENST00000559152 HSPA13P48723 471 aa11.12□□□□□ -0.63
CLPX-204ENST00000559152 PIK3CGP48736 1102 aa11.12□□□□□ -0.63
CLPX-204ENST00000559152 CCNHP51946 323 aaPredicted RBP11.12□□□□□ -0.63
CLPX-204ENST00000559152 GRAMD1BQ3KR37 738 aa11.12□□□□□ -0.63
CLPX-204ENST00000559152 FUT11Q495W5 492 aa11.12□□□□□ -0.63
CLPX-204ENST00000559152 LRRC66Q68CR7 880 aa11.12□□□□□ -0.63
CLPX-204ENST00000559152 GOLGA7Q7Z5G4 137 aa11.12□□□□□ -0.63
CLPX-204ENST00000559152 SLC22A17Q8WUG5 538 aa11.12□□□□□ -0.63
CLPX-204ENST00000559152 RAD9AQ99638 391 aa11.12□□□□□ -0.63
CLPX-204ENST00000559152 C17orf80Q9BSJ5 609 aa11.12□□□□□ -0.63
CLPX-204ENST00000559152 BOCQ9BWV1 1114 aa11.12□□□□□ -0.63
CLPX-204ENST00000559152 BBS2Q9BXC9 721 aa11.12□□□□□ -0.63
CLPX-204ENST00000559152 SLC2A11Q9BYW1 496 aa11.12□□□□□ -0.63
CLPX-204ENST00000559152 ZNF225Q9UK10 706 aa11.12□□□□□ -0.63
CLPX-204ENST00000559152 PTBP2Q9UKA9 531 aaKnown RBP11.12□□□□□ -0.63
CLPX-204ENST00000559152 SLC8A2Q9UPR5 921 aa11.12□□□□□ -0.63
CLPX-204ENST00000559152 RWDD3Q9Y3V2 267 aa11.12□□□□□ -0.63
CLPX-204ENST00000559152 ANGPTL3Q9Y5C1 460 aa11.12□□□□□ -0.63
CLPX-204ENST00000559152 PTGDR2Q9Y5Y4 395 aa11.12□□□□□ -0.63
CLPX-204ENST00000559152 GBF1Q92538 1859 aa11.12□□□□□ -0.63
CLPX-204ENST00000559152 PRSS51A0A1B0GVH4 220 aa11.12□□□□□ -0.63
CLPX-204ENST00000559152 PRORSD1PA6NEY8 169 aa11.12□□□□□ -0.63
CLPX-204ENST00000559152 GRXCR2A6NFK2 248 aa11.12□□□□□ -0.63
CLPX-204ENST00000559152 IFRD1O00458 451 aaPredicted RBP11.12□□□□□ -0.63
CLPX-204ENST00000559152 SLC22A3O75751 556 aa11.12□□□□□ -0.63
CLPX-204ENST00000559152 OR4F21O95013 312 aa11.12□□□□□ -0.63
CLPX-204ENST00000559152 OR56A5P0C7T3 313 aa11.12□□□□□ -0.63
CLPX-204ENST00000559152 CHRM1P11229 460 aaPredicted RBP11.12□□□□□ -0.63
CLPX-204ENST00000559152 UGT1A6P19224 532 aa11.12□□□□□ -0.63
CLPX-204ENST00000559152 UGT1A1P22309 533 aa11.12□□□□□ -0.63
CLPX-204ENST00000559152 UGT1A4P22310 534 aa11.12□□□□□ -0.63
CLPX-204ENST00000559152 UGT1A3P35503 534 aa11.12□□□□□ -0.63
CLPX-204ENST00000559152 UGT1A5P35504 534 aa11.12□□□□□ -0.63
CLPX-204ENST00000559152 NNMTP40261 264 aa11.12□□□□□ -0.63
CLPX-204ENST00000559152 ARL1P40616 181 aaPredicted RBP11.12□□□□□ -0.63
CLPX-204ENST00000559152 CTSOP43234 321 aaPredicted RBP11.12□□□□□ -0.63
CLPX-204ENST00000559152 STK19P49842 368 aaPredicted RBP11.12□□□□□ -0.63
CLPX-204ENST00000559152 UBE3AQ05086 875 aa11.12□□□□□ -0.63
CLPX-204ENST00000559152 BNIP2Q12982 314 aa11.12□□□□□ -0.63
CLPX-204ENST00000559152 LRRC36Q1X8D7 754 aa11.12□□□□□ -0.63
CLPX-204ENST00000559152 VPS26BQ4G0F5 336 aa11.12□□□□□ -0.63
CLPX-204ENST00000559152 BRAT1Q6PJG6 821 aa11.12□□□□□ -0.63
CLPX-204ENST00000559152 LAYNQ6UX15 382 aa11.12□□□□□ -0.63
CLPX-204ENST00000559152 RNF165Q6ZSG1 346 aa11.12□□□□□ -0.63
CLPX-204ENST00000559152 DHFR2Q86XF0 187 aa11.12□□□□□ -0.63
CLPX-204ENST00000559152 ZSWIM9Q86XI8 627 aa11.12□□□□□ -0.63
CLPX-204ENST00000559152 TMEM25Q86YD3 366 aa11.12□□□□□ -0.63
CLPX-204ENST00000559152 CDYL2Q8N8U2 506 aa11.12□□□□□ -0.63
CLPX-204ENST00000559152 GOLM1Q8NBJ4 401 aa11.12□□□□□ -0.63
CLPX-204ENST00000559152 ZUFSPQ96AP4 578 aa11.12□□□□□ -0.63
CLPX-204ENST00000559152 MIEF2Q96C03 454 aa11.12□□□□□ -0.63
CLPX-204ENST00000559152 SPDL1Q96EA4 605 aa11.12□□□□□ -0.63
CLPX-204ENST00000559152 TRIM54Q9BYV2 358 aa11.12□□□□□ -0.63
CLPX-204ENST00000559152 SMG9Q9H0W8 520 aaKnown RBP11.12□□□□□ -0.63
CLPX-204ENST00000559152 MUC13Q9H3R2 512 aa11.12□□□□□ -0.63
CLPX-204ENST00000559152 ZDHHC6Q9H6R6 413 aa11.12□□□□□ -0.63
CLPX-204ENST00000559152 RAD18Q9NS91 495 aa11.12□□□□□ -0.63
CLPX-204ENST00000559152 PDP2Q9P2J9 529 aa11.12□□□□□ -0.63
CLPX-204ENST00000559152 ABCD2Q9UBJ2 740 aa11.12□□□□□ -0.63
CLPX-204ENST00000559152 CNOT11Q9UKZ1 510 aaKnown RBP11.12□□□□□ -0.63
CLPX-204ENST00000559152 A0A1B0GTL3 188 aa11.11□□□□□ -0.63
CLPX-204ENST00000559152 WASH3PC4AMC7 463 aa11.11□□□□□ -0.63
CLPX-204ENST00000559152 NEDD8-MDP1E9PL57 170 aa11.11□□□□□ -0.63
CLPX-204ENST00000559152 SLC9A3R1O14745 358 aaPredicted RBP11.11□□□□□ -0.63
CLPX-204ENST00000559152 XYLBO75191 536 aa11.11□□□□□ -0.63
CLPX-204ENST00000559152 HNRNPA1P09651 372 aaKnown RBP eCLIP11.11□□□□□ -0.63
CLPX-204ENST00000559152 CYP2A6P11509 494 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms