RNA–Protein interactions for RNA: ENST00000558941.5

PCAT29-202, prostate cancer associated transcript 29, humanhuman

TSL 4 BASIC

Gene PCAT29, Length 545 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-202ENST00000558941 CRLF1O75462 422 aa7.54□□□□□ -1.2
PCAT29-202ENST00000558941 C9P02748 559 aa7.54□□□□□ -1.2
PCAT29-202ENST00000558941 PDHA1P08559 390 aa7.54□□□□□ -1.2
PCAT29-202ENST00000558941 RARAP10276 462 aa7.54□□□□□ -1.2
PCAT29-202ENST00000558941 XRCC1P18887 633 aaPredicted RBP7.54□□□□□ -1.2
PCAT29-202ENST00000558941 AMPD1P23109 780 aa7.54□□□□□ -1.2
PCAT29-202ENST00000558941 IL4RP24394 825 aa7.54□□□□□ -1.2
PCAT29-202ENST00000558941 CCNCP24863 283 aa7.54□□□□□ -1.2
PCAT29-202ENST00000558941 IL1R2P27930 398 aa7.54□□□□□ -1.2
PCAT29-202ENST00000558941 MMP13P45452 471 aa7.54□□□□□ -1.2
PCAT29-202ENST00000558941 POLD2P49005 469 aa7.54□□□□□ -1.2
PCAT29-202ENST00000558941 STC1P52823 247 aa7.54□□□□□ -1.2
PCAT29-202ENST00000558941 BIRC2Q13490 618 aa7.54□□□□□ -1.2
PCAT29-202ENST00000558941 DNASE1L3Q13609 305 aa7.54□□□□□ -1.2
PCAT29-202ENST00000558941 KIR2DS5Q14953 304 aa7.54□□□□□ -1.2
PCAT29-202ENST00000558941 PAFAH1B3Q15102 231 aaKnown RBP7.54□□□□□ -1.2
PCAT29-202ENST00000558941 KRTAP24-1Q3LI83 254 aa7.54□□□□□ -1.2
PCAT29-202ENST00000558941 FIGNQ5HY92 759 aa7.54□□□□□ -1.2
PCAT29-202ENST00000558941 TIGD7Q6NT04 549 aaPredicted RBP7.54□□□□□ -1.2
PCAT29-202ENST00000558941 SLC30A9Q6PML9 568 aa7.54□□□□□ -1.2
PCAT29-202ENST00000558941 XKRXQ6PP77 449 aa7.54□□□□□ -1.2
PCAT29-202ENST00000558941 LYSMD3Q7Z3D4 306 aa7.54□□□□□ -1.2
PCAT29-202ENST00000558941 TMEM200AQ86VY9 491 aa7.54□□□□□ -1.2
PCAT29-202ENST00000558941 GALNT13Q8IUC8 556 aa7.54□□□□□ -1.2
PCAT29-202ENST00000558941 PAF1Q8N7H5 531 aa7.54□□□□□ -1.2
PCAT29-202ENST00000558941 GALNT6Q8NCL4 622 aa7.54□□□□□ -1.2
PCAT29-202ENST00000558941 SLC37A2Q8TED4 501 aa7.54□□□□□ -1.2
PCAT29-202ENST00000558941 CT55Q8WUE5 264 aa7.54□□□□□ -1.2
PCAT29-202ENST00000558941 FAR1Q8WVX9 515 aa7.54□□□□□ -1.2
PCAT29-202ENST00000558941 PATE1Q8WXA2 126 aa7.54□□□□□ -1.2
PCAT29-202ENST00000558941 THAP4Q8WY91 577 aa7.54□□□□□ -1.2
PCAT29-202ENST00000558941 AHCYL2Q96HN2 611 aaKnown RBP7.54□□□□□ -1.2
PCAT29-202ENST00000558941 CSPG4P5Q96PW8 444 aa7.54□□□□□ -1.2
PCAT29-202ENST00000558941 HERPUD2Q9BSE4 406 aa7.54□□□□□ -1.2
PCAT29-202ENST00000558941 XPO4Q9C0E2 1151 aaKnown RBP7.54□□□□□ -1.2
PCAT29-202ENST00000558941 POLR1EQ9GZS1 481 aaKnown RBP7.54□□□□□ -1.2
PCAT29-202ENST00000558941 RAB33BQ9H082 229 aa7.54□□□□□ -1.2
PCAT29-202ENST00000558941 ILKAPQ9H0C8 392 aaPredicted RBP7.54□□□□□ -1.2
PCAT29-202ENST00000558941 CARD9Q9H257 536 aa7.54□□□□□ -1.2
PCAT29-202ENST00000558941 STN1Q9H668 368 aaKnown RBP7.54□□□□□ -1.2
PCAT29-202ENST00000558941 HAUS4Q9H6D7 363 aa7.54□□□□□ -1.2
PCAT29-202ENST00000558941 ZBTB20Q9HC78 741 aaPredicted RBP7.54□□□□□ -1.2
PCAT29-202ENST00000558941 RTN4Q9NQC3 1192 aaKnown RBP7.54□□□□□ -1.2
PCAT29-202ENST00000558941 ETNK2Q9NVF9 386 aa7.54□□□□□ -1.2
PCAT29-202ENST00000558941 NFKBIL1Q9UBC1 381 aaPredicted RBP7.54□□□□□ -1.2
PCAT29-202ENST00000558941 CNOT8Q9UFF9 292 aaKnown RBP7.54□□□□□ -1.2
PCAT29-202ENST00000558941 CNOT6Q9ULM6 557 aaKnown RBP7.54□□□□□ -1.2
PCAT29-202ENST00000558941 PLEKHA6Q9Y2H5 1048 aa7.54□□□□□ -1.2
PCAT29-202ENST00000558941 BZW2Q9Y6E2 419 aaKnown RBP7.54□□□□□ -1.2
PCAT29-202ENST00000558941 LILRA5A6NI73 299 aa7.53□□□□□ -1.2
PCAT29-202ENST00000558941 DDX3XO00571 662 aaKnown RBP eCLIP7.53□□□□□ -1.2
PCAT29-202ENST00000558941 CCL21O00585 134 aa7.53□□□□□ -1.2
PCAT29-202ENST00000558941 ZNF185O15231 689 aa7.53□□□□□ -1.2
PCAT29-202ENST00000558941 MATN3O15232 486 aa7.53□□□□□ -1.2
PCAT29-202ENST00000558941 NUAK1O60285 661 aa7.53□□□□□ -1.2
PCAT29-202ENST00000558941 CLDN14O95500 239 aa7.53□□□□□ -1.2
PCAT29-202ENST00000558941 PRLP01236 227 aa7.53□□□□□ -1.2
PCAT29-202ENST00000558941 F3P13726 295 aa7.53□□□□□ -1.2
PCAT29-202ENST00000558941 CA4P22748 312 aa7.53□□□□□ -1.2
PCAT29-202ENST00000558941 ARSEP51690 589 aa7.53□□□□□ -1.2
PCAT29-202ENST00000558941 TDGF1P3P51864 188 aa7.53□□□□□ -1.2
PCAT29-202ENST00000558941 HHEXQ03014 270 aa7.53□□□□□ -1.2
PCAT29-202ENST00000558941 GALNT2Q10471 571 aa7.53□□□□□ -1.2
PCAT29-202ENST00000558941 IL11RAQ14626 422 aa7.53□□□□□ -1.2
PCAT29-202ENST00000558941 LLGL1Q15334 1064 aa7.53□□□□□ -1.2
PCAT29-202ENST00000558941 IFI16Q16666 785 aaKnown RBP7.53□□□□□ -1.2
PCAT29-202ENST00000558941 LONRF1Q17RB8 773 aa7.53□□□□□ -1.2
PCAT29-202ENST00000558941 HENMT1Q5T8I9 393 aaKnown RBP7.53□□□□□ -1.2
PCAT29-202ENST00000558941 LRRC66Q68CR7 880 aa7.53□□□□□ -1.2
PCAT29-202ENST00000558941 PDPK2PQ6A1A2 396 aa7.53□□□□□ -1.2
PCAT29-202ENST00000558941 HMBOX1Q6NT76 420 aa7.53□□□□□ -1.2
PCAT29-202ENST00000558941 SASS6Q6UVJ0 657 aa7.53□□□□□ -1.2
PCAT29-202ENST00000558941 WASH2PQ6VEQ5 465 aa7.53□□□□□ -1.2
PCAT29-202ENST00000558941 ZNF571Q7Z3V5 609 aaPredicted RBP7.53□□□□□ -1.2
PCAT29-202ENST00000558941 SLC9B2Q86UD5 537 aa7.53□□□□□ -1.2
PCAT29-202ENST00000558941 TSPAN33Q86UF1 283 aa7.53□□□□□ -1.2
PCAT29-202ENST00000558941 PLXDC1Q8IUK5 500 aa7.53□□□□□ -1.2
PCAT29-202ENST00000558941 ATPAF2Q8N5M1 289 aa7.53□□□□□ -1.2
PCAT29-202ENST00000558941 AOPEPQ8N6M6 819 aa7.53□□□□□ -1.2
PCAT29-202ENST00000558941 DTX3LQ8TDB6 740 aa7.53□□□□□ -1.2
PCAT29-202ENST00000558941 ADAMTS17Q8TE56 1095 aa7.53□□□□□ -1.2
PCAT29-202ENST00000558941 PTCD2Q8WV60 388 aaKnown RBP7.53□□□□□ -1.2
PCAT29-202ENST00000558941 FCRL4Q96PJ5 515 aa7.53□□□□□ -1.2
PCAT29-202ENST00000558941 WDR24Q96S15 920 aa7.53□□□□□ -1.2
PCAT29-202ENST00000558941 BPIFA3Q9BQP9 254 aa7.53□□□□□ -1.2
PCAT29-202ENST00000558941 TRIM7Q9C029 511 aa7.53□□□□□ -1.2
PCAT29-202ENST00000558941 AKIRIN1Q9H9L7 192 aaPredicted RBP7.53□□□□□ -1.2
PCAT29-202ENST00000558941 PCDH18Q9HCL0 1135 aa7.53□□□□□ -1.2
PCAT29-202ENST00000558941 WASH6PQ9NQA3 447 aa7.53□□□□□ -1.2
PCAT29-202ENST00000558941 SIDT1Q9NXL6 827 aaKnown RBP7.53□□□□□ -1.2
PCAT29-202ENST00000558941 GPR83Q9NYM4 423 aa7.53□□□□□ -1.2
PCAT29-202ENST00000558941 SEMA5BQ9P283 1151 aa7.53□□□□□ -1.2
PCAT29-202ENST00000558941 SUCOQ9UBS9 1254 aaKnown RBP7.53□□□□□ -1.2
PCAT29-202ENST00000558941 EPHA6Q9UF33 1036 aa7.53□□□□□ -1.2
PCAT29-202ENST00000558941 ADGRG1Q9Y653 693 aa7.53□□□□□ -1.2
PCAT29-202ENST00000558941 NUP210LQ5VU65 1888 aa7.52□□□□□ -1.21
PCAT29-202ENST00000558941 SSU72P8A0A1W2PR75 194 aa7.52□□□□□ -1.21
PCAT29-202ENST00000558941 TTC24A2A3L6 582 aaPredicted RBP7.52□□□□□ -1.21
PCAT29-202ENST00000558941 LRRC53A6NM62 1247 aa7.52□□□□□ -1.21
PCAT29-202ENST00000558941 FAM171A2A8MVW0 826 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms