RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 MTX2O75431 263 aa11.57□□□□□ -0.56
SMAD3-206ENST00000558739 MTA2O94776 668 aa11.57□□□□□ -0.56
SMAD3-206ENST00000558739 UNC5CO95185 931 aa11.57□□□□□ -0.56
SMAD3-206ENST00000558739 CLDN7O95471 211 aa11.57□□□□□ -0.56
SMAD3-206ENST00000558739 CLCNKAP51800 687 aa11.57□□□□□ -0.56
SMAD3-206ENST00000558739 LTBQ06643 244 aa11.57□□□□□ -0.56
SMAD3-206ENST00000558739 SLC9A5Q14940 896 aa11.57□□□□□ -0.56
SMAD3-206ENST00000558739 EXOC3L4Q17RC7 722 aa11.57□□□□□ -0.56
SMAD3-206ENST00000558739 KHDC1Q4VXA5 237 aaKnown RBP11.57□□□□□ -0.56
SMAD3-206ENST00000558739 HENMT1Q5T8I9 393 aaKnown RBP11.57□□□□□ -0.56
SMAD3-206ENST00000558739 B3GNTL1Q67FW5 361 aaPredicted RBP11.57□□□□□ -0.56
SMAD3-206ENST00000558739 ATL3Q6DD88 541 aa11.57□□□□□ -0.56
SMAD3-206ENST00000558739 IGFL2Q6UWQ7 119 aa11.57□□□□□ -0.56
SMAD3-206ENST00000558739 TRIM72Q6ZMU5 477 aa11.57□□□□□ -0.56
SMAD3-206ENST00000558739 ZNF547Q8IVP9 402 aa11.57□□□□□ -0.56
SMAD3-206ENST00000558739 SLC30A5Q8TAD4 765 aa11.57□□□□□ -0.56
SMAD3-206ENST00000558739 CXorf40BQ96DE9 158 aa11.57□□□□□ -0.56
SMAD3-206ENST00000558739 MTFMTQ96DP5 389 aaKnown RBP11.57□□□□□ -0.56
SMAD3-206ENST00000558739 GSDMAQ96QA5 445 aa11.57□□□□□ -0.56
SMAD3-206ENST00000558739 NUDCD1Q96RS6 583 aa11.57□□□□□ -0.56
SMAD3-206ENST00000558739 CARD9Q9H257 536 aa11.57□□□□□ -0.56
SMAD3-206ENST00000558739 SOHLH2Q9NX45 425 aa11.57□□□□□ -0.56
SMAD3-206ENST00000558739 BTRCQ9Y297 605 aa11.57□□□□□ -0.56
SMAD3-206ENST00000558739 RPH3AQ9Y2J0 694 aaPredicted RBP11.57□□□□□ -0.56
SMAD3-206ENST00000558739 PTRH2Q9Y3E5 179 aaKnown RBP11.57□□□□□ -0.56
SMAD3-206ENST00000558739 SONP18583 2426 aaKnown RBP11.56□□□□□ -0.56
SMAD3-206ENST00000558739 A0A0J9YYE9 177 aa11.56□□□□□ -0.56
SMAD3-206ENST00000558739 TMEM150CB9EJG8 249 aa11.56□□□□□ -0.56
SMAD3-206ENST00000558739 LSM8O95777 96 aaKnown RBP11.56□□□□□ -0.56
SMAD3-206ENST00000558739 TRBC1P01850 177 aa11.56□□□□□ -0.56
SMAD3-206ENST00000558739 UMODP07911 640 aa11.56□□□□□ -0.56
SMAD3-206ENST00000558739 FECHP22830 423 aa11.56□□□□□ -0.56
SMAD3-206ENST00000558739 MST1P26927 711 aa11.56□□□□□ -0.56
SMAD3-206ENST00000558739 IST1P53990 364 aa11.56□□□□□ -0.56
SMAD3-206ENST00000558739 SOX8P57073 446 aa11.56□□□□□ -0.56
SMAD3-206ENST00000558739 CSNK1G2P78368 415 aa11.56□□□□□ -0.56
SMAD3-206ENST00000558739 IL10RBQ08334 325 aa11.56□□□□□ -0.56
SMAD3-206ENST00000558739 RFTN1Q14699 578 aaPredicted RBP11.56□□□□□ -0.56
SMAD3-206ENST00000558739 PRKD1Q15139 912 aaPredicted RBP11.56□□□□□ -0.56
SMAD3-206ENST00000558739 ARMC12Q5T9G4 340 aa11.56□□□□□ -0.56
SMAD3-206ENST00000558739 DPY19L2P1Q6NXN4 242 aa11.56□□□□□ -0.56
SMAD3-206ENST00000558739 WDR59Q6PJI9 974 aa11.56□□□□□ -0.56
SMAD3-206ENST00000558739 GBP6Q6ZN66 633 aa11.56□□□□□ -0.56
SMAD3-206ENST00000558739 KMT5CQ86Y97 462 aa11.56□□□□□ -0.56
SMAD3-206ENST00000558739 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.56□□□□□ -0.56
SMAD3-206ENST00000558739 ACBD4Q8NC06 268 aa11.56□□□□□ -0.56
SMAD3-206ENST00000558739 NR4A3Q92570 626 aa11.56□□□□□ -0.56
SMAD3-206ENST00000558739 DHTKD1Q96HY7 919 aaPredicted RBP11.56□□□□□ -0.56
SMAD3-206ENST00000558739 MGME1Q9BQP7 344 aa11.56□□□□□ -0.56
SMAD3-206ENST00000558739 RMI1Q9H9A7 625 aa11.56□□□□□ -0.56
SMAD3-206ENST00000558739 TINAGQ9UJW2 476 aa11.56□□□□□ -0.56
SMAD3-206ENST00000558739 FBXL4Q9UKA2 621 aa11.56□□□□□ -0.56
SMAD3-206ENST00000558739 PPIL1Q9Y3C6 166 aa11.56□□□□□ -0.56
SMAD3-206ENST00000558739 OR5K3A6NET4 321 aa11.55□□□□□ -0.56
SMAD3-206ENST00000558739 C9J4A7 227 aa11.55□□□□□ -0.56
SMAD3-206ENST00000558739 PEX12O00623 359 aa11.55□□□□□ -0.56
SMAD3-206ENST00000558739 FZD6O60353 706 aa11.55□□□□□ -0.56
SMAD3-206ENST00000558739 ZBTB11O95625 1053 aaPredicted RBP11.55□□□□□ -0.56
SMAD3-206ENST00000558739 PYGLP06737 847 aa11.55□□□□□ -0.56
SMAD3-206ENST00000558739 CBSLP0DN79 551 aa11.55□□□□□ -0.56
SMAD3-206ENST00000558739 ZNF7P17097 686 aaPredicted RBP11.55□□□□□ -0.56
SMAD3-206ENST00000558739 CYP2A7P20853 494 aa11.55□□□□□ -0.56
SMAD3-206ENST00000558739 MMP8P22894 467 aa11.55□□□□□ -0.56
SMAD3-206ENST00000558739 DNAJA1P31689 397 aaKnown RBP11.55□□□□□ -0.56
SMAD3-206ENST00000558739 CBSP35520 551 aa11.55□□□□□ -0.56
SMAD3-206ENST00000558739 KPNA2P52292 529 aaKnown RBP11.55□□□□□ -0.56
SMAD3-206ENST00000558739 KRT85P78386 507 aa11.55□□□□□ -0.56
SMAD3-206ENST00000558739 PLCL1Q15111 1095 aa11.55□□□□□ -0.56
SMAD3-206ENST00000558739 TLR1Q15399 786 aa11.55□□□□□ -0.56
SMAD3-206ENST00000558739 ASIC2Q16515 512 aa11.55□□□□□ -0.56
SMAD3-206ENST00000558739 C1orf189Q5VU69 101 aa11.55□□□□□ -0.56
SMAD3-206ENST00000558739 MLIPQ5VWP3 458 aa11.55□□□□□ -0.56
SMAD3-206ENST00000558739 ABRAXAS1Q6UWZ7 409 aa11.55□□□□□ -0.56
SMAD3-206ENST00000558739 MEX3BQ6ZN04 569 aaKnown RBP11.55□□□□□ -0.56
SMAD3-206ENST00000558739 LINC00696Q6ZRV3 163 aa11.55□□□□□ -0.56
SMAD3-206ENST00000558739 TAOK1Q7L7X3 1001 aa11.55□□□□□ -0.56
SMAD3-206ENST00000558739 ADGRG6Q86SQ4 1221 aa11.55□□□□□ -0.56
SMAD3-206ENST00000558739 NLRP8Q86W28 1048 aa11.55□□□□□ -0.56
SMAD3-206ENST00000558739 OR8K5Q8NH50 307 aa11.55□□□□□ -0.56
SMAD3-206ENST00000558739 EPS8L1Q8TE68 723 aa11.55□□□□□ -0.56
SMAD3-206ENST00000558739 FAM81BQ96LP2 452 aa11.55□□□□□ -0.56
SMAD3-206ENST00000558739 SPOCK3Q9BQ16 436 aa11.55□□□□□ -0.56
SMAD3-206ENST00000558739 MESP1Q9BRJ9 268 aa11.55□□□□□ -0.56
SMAD3-206ENST00000558739 GDPD2Q9HCC8 539 aa11.55□□□□□ -0.56
SMAD3-206ENST00000558739 SLC6A20Q9NP91 592 aa11.55□□□□□ -0.56
SMAD3-206ENST00000558739 MAN1B1Q9UKM7 699 aa11.55□□□□□ -0.56
SMAD3-206ENST00000558739 CDYLQ9Y232 598 aa11.55□□□□□ -0.56
SMAD3-206ENST00000558739 PADI2Q9Y2J8 665 aa11.55□□□□□ -0.56
SMAD3-206ENST00000558739 FHOD1Q9Y613 1164 aa11.55□□□□□ -0.56
SMAD3-206ENST00000558739 CUBNO60494 3623 aa11.55□□□□□ -0.56
SMAD3-206ENST00000558739 SNRNP200O75643 2136 aaKnown RBP11.54□□□□□ -0.56
SMAD3-206ENST00000558739 ANK3Q12955 4377 aaKnown RBP11.54□□□□□ -0.56
SMAD3-206ENST00000558739 A0A1W2PQ67 120 aa11.54□□□□□ -0.56
SMAD3-206ENST00000558739 FAM221AA4D161 298 aa11.54□□□□□ -0.56
SMAD3-206ENST00000558739 SLC9B1P1A6NJY1 282 aa11.54□□□□□ -0.56
SMAD3-206ENST00000558739 EEF2KO00418 725 aaKnown RBP11.54□□□□□ -0.56
SMAD3-206ENST00000558739 CHUKO15111 745 aa11.54□□□□□ -0.56
SMAD3-206ENST00000558739 CLDN14O95500 239 aa11.54□□□□□ -0.56
SMAD3-206ENST00000558739 ERCC2P18074 760 aa11.54□□□□□ -0.56
SMAD3-206ENST00000558739 GPD1P21695 349 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms