RNA–Protein interactions for RNA: ENST00000558394.5

TSPAN3-204, Transcript of tetraspanin 3, humanhuman

TSL 4

Gene TSPAN3, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-204ENST00000558394 GPR19Q15760 415 aa17.43■□□□□ 0.38
TSPAN3-204ENST00000558394 IFI16Q16666 785 aaKnown RBP17.43■□□□□ 0.38
TSPAN3-204ENST00000558394 CDKAL1Q5VV42 579 aa17.43■□□□□ 0.38
TSPAN3-204ENST00000558394 CERS6Q6ZMG9 384 aa17.43■□□□□ 0.38
TSPAN3-204ENST00000558394 ZNF517Q6ZMY9 492 aaPredicted RBP17.43■□□□□ 0.38
TSPAN3-204ENST00000558394 RAB43Q86YS6 212 aa17.43■□□□□ 0.38
TSPAN3-204ENST00000558394 GDAP1Q8TB36 358 aa17.43■□□□□ 0.38
TSPAN3-204ENST00000558394 ARRDC2Q8TBH0 407 aa17.43■□□□□ 0.38
TSPAN3-204ENST00000558394 MAML1Q92585 1016 aa17.43■□□□□ 0.38
TSPAN3-204ENST00000558394 TTC25Q96NG3 672 aa17.43■□□□□ 0.38
TSPAN3-204ENST00000558394 LRFN5Q96NI6 719 aa17.43■□□□□ 0.38
TSPAN3-204ENST00000558394 NUP85Q9BW27 656 aa17.43■□□□□ 0.38
TSPAN3-204ENST00000558394 SLC7A5P2Q9GIP4 190 aa17.43■□□□□ 0.38
TSPAN3-204ENST00000558394 PCDH18Q9HCL0 1135 aa17.43■□□□□ 0.38
TSPAN3-204ENST00000558394 AGPAT4Q9NRZ5 378 aa17.43■□□□□ 0.38
TSPAN3-204ENST00000558394 MYO1AQ9UBC5 1043 aa17.43■□□□□ 0.38
TSPAN3-204ENST00000558394 PIKFYVEQ9Y2I7 2098 aa17.43■□□□□ 0.38
TSPAN3-204ENST00000558394 CSMD1Q96PZ7 3565 aa17.43■□□□□ 0.38
TSPAN3-204ENST00000558394 ZBTB11O95625 1053 aaPredicted RBP17.42■□□□□ 0.38
TSPAN3-204ENST00000558394 GLRBP48167 497 aa17.42■□□□□ 0.38
TSPAN3-204ENST00000558394 OOSP2Q86WS3 158 aa17.42■□□□□ 0.38
TSPAN3-204ENST00000558394 DSELQ8IZU8 1212 aa17.42■□□□□ 0.38
TSPAN3-204ENST00000558394 GPR26Q8NDV2 337 aa17.42■□□□□ 0.38
TSPAN3-204ENST00000558394 TEKT4Q8WW24 435 aa17.42■□□□□ 0.38
TSPAN3-204ENST00000558394 TM9SF4Q92544 642 aa17.42■□□□□ 0.38
TSPAN3-204ENST00000558394 TRIM11Q96F44 468 aa17.42■□□□□ 0.38
TSPAN3-204ENST00000558394 LATS2Q9NRM7 1088 aa17.42■□□□□ 0.38
TSPAN3-204ENST00000558394 HRASLS2Q9NWW9 162 aa17.42■□□□□ 0.38
TSPAN3-204ENST00000558394 DTLQ9NZJ0 730 aa17.42■□□□□ 0.38
TSPAN3-204ENST00000558394 SHOC2Q9UQ13 582 aa17.42■□□□□ 0.38
TSPAN3-204ENST00000558394 ENTPD4Q9Y227 616 aa17.42■□□□□ 0.38
TSPAN3-204ENST00000558394 WDR37Q9Y2I8 494 aa17.42■□□□□ 0.38
TSPAN3-204ENST00000558394 PADI2Q9Y2J8 665 aa17.42■□□□□ 0.38
TSPAN3-204ENST00000558394 LGALS16A8MUM7 142 aa17.41■□□□□ 0.38
TSPAN3-204ENST00000558394 MFSD11O43934 449 aa17.41■□□□□ 0.38
TSPAN3-204ENST00000558394 KCNJ13O60928 360 aa17.41■□□□□ 0.38
TSPAN3-204ENST00000558394 HLA-DQB2P05538 268 aa17.41■□□□□ 0.38
TSPAN3-204ENST00000558394 CCNCP24863 283 aa17.41■□□□□ 0.38
TSPAN3-204ENST00000558394 CD86P42081 329 aa17.41■□□□□ 0.38
TSPAN3-204ENST00000558394 NIPAL4Q0D2K0 466 aa17.41■□□□□ 0.38
TSPAN3-204ENST00000558394 GALNT2Q10471 571 aa17.41■□□□□ 0.38
TSPAN3-204ENST00000558394 ATP1A4Q13733 1029 aa17.41■□□□□ 0.38
TSPAN3-204ENST00000558394 GALNT3Q14435 633 aa17.41■□□□□ 0.38
TSPAN3-204ENST00000558394 PLEKHS1Q5SXH7 462 aa17.41■□□□□ 0.38
TSPAN3-204ENST00000558394 HGSNATQ68CP4 663 aa17.41■□□□□ 0.38
TSPAN3-204ENST00000558394 ZNF547Q8IVP9 402 aa17.41■□□□□ 0.38
TSPAN3-204ENST00000558394 ZBTB2Q8N680 514 aa17.41■□□□□ 0.38
TSPAN3-204ENST00000558394 ZNF501Q96CX3 271 aaPredicted RBP17.41■□□□□ 0.38
TSPAN3-204ENST00000558394 RANBP9Q96S59 729 aa17.41■□□□□ 0.38
TSPAN3-204ENST00000558394 GPR63Q9BZJ6 419 aa17.41■□□□□ 0.38
TSPAN3-204ENST00000558394 OR5K3A6NET4 321 aa17.4■□□□□ 0.38
TSPAN3-204ENST00000558394 C9J4A7 227 aa17.4■□□□□ 0.38
TSPAN3-204ENST00000558394 KRT38O76015 456 aa17.4■□□□□ 0.38
TSPAN3-204ENST00000558394 IPO13O94829 963 aaKnown RBP17.4■□□□□ 0.38
TSPAN3-204ENST00000558394 MYBL1P10243 752 aa17.4■□□□□ 0.38
TSPAN3-204ENST00000558394 TCF4P15884 667 aa17.4■□□□□ 0.38
TSPAN3-204ENST00000558394 PIGHQ14442 188 aaPredicted RBP17.4■□□□□ 0.38
TSPAN3-204ENST00000558394 RPE65Q16518 533 aa17.4■□□□□ 0.38
TSPAN3-204ENST00000558394 IRF2BP2Q7Z5L9 587 aa17.4■□□□□ 0.38
TSPAN3-204ENST00000558394 AMZ2Q86W34 360 aa17.4■□□□□ 0.38
TSPAN3-204ENST00000558394 ZADH2Q8N4Q0 377 aa17.4■□□□□ 0.38
TSPAN3-204ENST00000558394 SLC38A9Q8NBW4 561 aa17.4■□□□□ 0.38
TSPAN3-204ENST00000558394 CLEC1AQ8NC01 280 aa17.4■□□□□ 0.38
TSPAN3-204ENST00000558394 GPR150Q8NGU9 434 aa17.4■□□□□ 0.38
TSPAN3-204ENST00000558394 FER1L6-AS2Q96M78 137 aa17.4■□□□□ 0.38
TSPAN3-204ENST00000558394 ERGIC2Q96RQ1 377 aa17.4■□□□□ 0.38
TSPAN3-204ENST00000558394 NUP62CLQ9H1M0 184 aa17.4■□□□□ 0.38
TSPAN3-204ENST00000558394 MDC1Q14676 2089 aaKnown RBP17.4■□□□□ 0.38
TSPAN3-204ENST00000558394 SPTBP11277 2137 aa17.39■□□□□ 0.38
TSPAN3-204ENST00000558394 MAP3K7O43318 606 aa17.39■□□□□ 0.37
TSPAN3-204ENST00000558394 GZMAP12544 262 aa17.39■□□□□ 0.37
TSPAN3-204ENST00000558394 CYP2A7P20853 494 aa17.39■□□□□ 0.37
TSPAN3-204ENST00000558394 CDK11BP21127 795 aaKnown RBP17.39■□□□□ 0.37
TSPAN3-204ENST00000558394 OTX2P32243 289 aa17.39■□□□□ 0.37
TSPAN3-204ENST00000558394 SSR1P43307 286 aaKnown RBP17.39■□□□□ 0.37
TSPAN3-204ENST00000558394 ADCY2Q08462 1091 aa17.39■□□□□ 0.37
TSPAN3-204ENST00000558394 TMEM115Q12893 351 aaPredicted RBP17.39■□□□□ 0.37
TSPAN3-204ENST00000558394 XRCC4Q13426 336 aa17.39■□□□□ 0.37
TSPAN3-204ENST00000558394 FAM69BQ5VUD6 431 aa17.39■□□□□ 0.37
TSPAN3-204ENST00000558394 LCN10Q6JVE6 187 aa17.39■□□□□ 0.37
TSPAN3-204ENST00000558394 SYTL1Q8IYJ3 562 aa17.39■□□□□ 0.37
TSPAN3-204ENST00000558394 CARFQ8N187 725 aa17.39■□□□□ 0.37
TSPAN3-204ENST00000558394 CCNYQ8ND76 341 aa17.39■□□□□ 0.37
TSPAN3-204ENST00000558394 BRSK1Q8TDC3 778 aa17.39■□□□□ 0.37
TSPAN3-204ENST00000558394 UBE2Q2Q8WVN8 375 aa17.39■□□□□ 0.37
TSPAN3-204ENST00000558394 FATE1Q969F0 183 aa17.39■□□□□ 0.37
TSPAN3-204ENST00000558394 EID2BQ96D98 161 aa17.39■□□□□ 0.37
TSPAN3-204ENST00000558394 IP6K3Q96PC2 410 aa17.39■□□□□ 0.37
TSPAN3-204ENST00000558394 TSGA13Q96PP4 275 aa17.39■□□□□ 0.37
TSPAN3-204ENST00000558394 ZCCHC2Q9C0B9 1178 aaKnown RBP17.39■□□□□ 0.37
TSPAN3-204ENST00000558394 IMP3Q9NV31 184 aaKnown RBP17.39■□□□□ 0.37
TSPAN3-204ENST00000558394 FANCLQ9NW38 375 aa17.39■□□□□ 0.37
TSPAN3-204ENST00000558394 NFKBIL1Q9UBC1 381 aaPredicted RBP17.39■□□□□ 0.37
TSPAN3-204ENST00000558394 PSMD13Q9UNM6 376 aa17.39■□□□□ 0.37
TSPAN3-204ENST00000558394 POLQO75417 2590 aa17.39■□□□□ 0.37
TSPAN3-204ENST00000558394 FBN2P35556 2912 aa17.39■□□□□ 0.37
TSPAN3-204ENST00000558394 CROCCQ5TZA2 2017 aa17.38■□□□□ 0.37
TSPAN3-204ENST00000558394 PEX12O00623 359 aa17.38■□□□□ 0.37
TSPAN3-204ENST00000558394 LRRTM2O43300 516 aa17.38■□□□□ 0.37
TSPAN3-204ENST00000558394 IGHEP01854 428 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms