RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 PRPF4O43172 522 aaKnown RBP eCLIP12.22□□□□□ -0.45
TPM1-209ENST00000558072 GRID2O43424 1007 aa12.22□□□□□ -0.45
TPM1-209ENST00000558072 GALR2O43603 387 aaPredicted RBP12.22□□□□□ -0.45
TPM1-209ENST00000558072 RFPL1O75677 317 aa12.22□□□□□ -0.45
TPM1-209ENST00000558072 PIAS1O75925 651 aa12.22□□□□□ -0.45
TPM1-209ENST00000558072 ZWINTO95229 277 aa12.22□□□□□ -0.45
TPM1-209ENST00000558072 TRIM16O95361 564 aa12.22□□□□□ -0.45
TPM1-209ENST00000558072 ALDOAP04075 364 aaKnown RBP12.22□□□□□ -0.45
TPM1-209ENST00000558072 C2P06681 752 aa12.22□□□□□ -0.45
TPM1-209ENST00000558072 RBP1P09455 135 aa12.22□□□□□ -0.45
TPM1-209ENST00000558072 PRSS56P0CW18 603 aa12.22□□□□□ -0.45
TPM1-209ENST00000558072 BRAFP15056 766 aa12.22□□□□□ -0.45
TPM1-209ENST00000558072 MAOBP27338 520 aa12.22□□□□□ -0.45
TPM1-209ENST00000558072 CRHR1P34998 444 aa12.22□□□□□ -0.45
TPM1-209ENST00000558072 AFF3P51826 1226 aaKnown RBP12.22□□□□□ -0.45
TPM1-209ENST00000558072 TAS2R39P59534 338 aa12.22□□□□□ -0.45
TPM1-209ENST00000558072 MAGOHP61326 146 aaKnown RBP12.22□□□□□ -0.45
TPM1-209ENST00000558072 SLC18A2Q05940 514 aa12.22□□□□□ -0.45
TPM1-209ENST00000558072 BMPR2Q13873 1038 aa12.22□□□□□ -0.45
TPM1-209ENST00000558072 TUBB8Q3ZCM7 444 aa12.22□□□□□ -0.45
TPM1-209ENST00000558072 CCDC153Q494R4 210 aa12.22□□□□□ -0.45
TPM1-209ENST00000558072 SYTL3Q4VX76 610 aa12.22□□□□□ -0.45
TPM1-209ENST00000558072 ZNF789Q5FWF6 425 aa12.22□□□□□ -0.45
TPM1-209ENST00000558072 CTSL3PQ5NE16 218 aa12.22□□□□□ -0.45
TPM1-209ENST00000558072 LYSMD4Q5XG99 296 aa12.22□□□□□ -0.45
TPM1-209ENST00000558072 PMS2CLQ68D20 193 aa12.22□□□□□ -0.45
TPM1-209ENST00000558072 ZNF549Q6P9A3 640 aa12.22□□□□□ -0.45
TPM1-209ENST00000558072 Q6ZSR6 202 aa12.22□□□□□ -0.45
TPM1-209ENST00000558072 NEK10Q6ZWH5 1172 aa12.22□□□□□ -0.45
TPM1-209ENST00000558072 AMZ2Q86W34 360 aa12.22□□□□□ -0.45
TPM1-209ENST00000558072 SLC41A1Q8IVJ1 513 aa12.22□□□□□ -0.45
TPM1-209ENST00000558072 SDR16C5Q8N3Y7 309 aa12.22□□□□□ -0.45
TPM1-209ENST00000558072 OXR1Q8N573 874 aa12.22□□□□□ -0.45
TPM1-209ENST00000558072 ZBTB2Q8N680 514 aa12.22□□□□□ -0.45
TPM1-209ENST00000558072 RASGEF1AQ8N9B8 481 aa12.22□□□□□ -0.45
TPM1-209ENST00000558072 CEP76Q8TAP6 659 aa12.22□□□□□ -0.45
TPM1-209ENST00000558072 HM13Q8TCT9 377 aa12.22□□□□□ -0.45
TPM1-209ENST00000558072 MZB1Q8WU39 189 aa12.22□□□□□ -0.45
TPM1-209ENST00000558072 TMEM159Q96B96 161 aa12.22□□□□□ -0.45
TPM1-209ENST00000558072 SCARF2Q96GP6 870 aaPredicted RBP12.22□□□□□ -0.45
TPM1-209ENST00000558072 ZC3H10Q96K80 434 aaKnown RBP12.22□□□□□ -0.45
TPM1-209ENST00000558072 BMFQ96LC9 184 aa12.22□□□□□ -0.45
TPM1-209ENST00000558072 FOPNLQ96NB1 174 aa12.22□□□□□ -0.45
TPM1-209ENST00000558072 TIMM29Q9BSF4 260 aa12.22□□□□□ -0.45
TPM1-209ENST00000558072 BOCQ9BWV1 1114 aa12.22□□□□□ -0.45
TPM1-209ENST00000558072 VPS11Q9H270 941 aa12.22□□□□□ -0.45
TPM1-209ENST00000558072 FAM86C1Q9NVL1 165 aa12.22□□□□□ -0.45
TPM1-209ENST00000558072 SLC17A6Q9P2U8 582 aa12.22□□□□□ -0.45
TPM1-209ENST00000558072 ATXN10Q9UBB4 475 aa12.22□□□□□ -0.45
TPM1-209ENST00000558072 CTNNAL1Q9UBT7 734 aa12.22□□□□□ -0.45
TPM1-209ENST00000558072 KLQ9UEF7 1012 aa12.22□□□□□ -0.45
TPM1-209ENST00000558072 RAPGEFL1Q9UHV5 662 aa12.22□□□□□ -0.45
TPM1-209ENST00000558072 TMPRSS11EQ9UL52 423 aa12.22□□□□□ -0.45
TPM1-209ENST00000558072 ACSL5Q9ULC5 683 aa12.22□□□□□ -0.45
TPM1-209ENST00000558072 TMCO1Q9UM00 188 aa12.22□□□□□ -0.45
TPM1-209ENST00000558072 OR1A2Q9Y585 309 aa12.22□□□□□ -0.45
TPM1-209ENST00000558072 ZNF318Q5VUA4 2279 aa12.21□□□□□ -0.45
TPM1-209ENST00000558072 A0A1B0GTW7 788 aa12.21□□□□□ -0.45
TPM1-209ENST00000558072 MGAT4DA6NG13 374 aa12.21□□□□□ -0.45
TPM1-209ENST00000558072 DNAJC6O75061 913 aa12.21□□□□□ -0.45
TPM1-209ENST00000558072 KLHL2O95198 593 aa12.21□□□□□ -0.45
TPM1-209ENST00000558072 RASGRP1O95267 797 aa12.21□□□□□ -0.45
TPM1-209ENST00000558072 SYF2O95926 243 aaKnown RBP12.21□□□□□ -0.45
TPM1-209ENST00000558072 TNFP01375 233 aa12.21□□□□□ -0.45
TPM1-209ENST00000558072 LTA4HP09960 611 aaKnown RBP12.21□□□□□ -0.45
TPM1-209ENST00000558072 THEGLP0DJG4 465 aa12.21□□□□□ -0.45
TPM1-209ENST00000558072 PYGBP11216 843 aa12.21□□□□□ -0.45
TPM1-209ENST00000558072 ZNF8P17098 575 aaPredicted RBP12.21□□□□□ -0.45
TPM1-209ENST00000558072 CCNFP41002 786 aa12.21□□□□□ -0.45
TPM1-209ENST00000558072 CLCNKAP51800 687 aa12.21□□□□□ -0.45
TPM1-209ENST00000558072 C21orf59P57076 290 aa12.21□□□□□ -0.45
TPM1-209ENST00000558072 B4GALNT1Q00973 533 aa12.21□□□□□ -0.45
TPM1-209ENST00000558072 ACAP2Q15057 778 aa12.21□□□□□ -0.45
TPM1-209ENST00000558072 RBM20Q5T481 1227 aaKnown RBP12.21□□□□□ -0.45
TPM1-209ENST00000558072 ENPP7Q6UWV6 458 aa12.21□□□□□ -0.45
TPM1-209ENST00000558072 GCNT7Q6ZNI0 430 aa12.21□□□□□ -0.45
TPM1-209ENST00000558072 EXOC3L1Q86VI1 746 aa12.21□□□□□ -0.45
TPM1-209ENST00000558072 CYP4X1Q8N118 509 aa12.21□□□□□ -0.45
TPM1-209ENST00000558072 MYO1HQ8N1T3 1032 aa12.21□□□□□ -0.45
TPM1-209ENST00000558072 CLDN19Q8N6F1 224 aa12.21□□□□□ -0.45
TPM1-209ENST00000558072 OR2L2Q8NH16 312 aa12.21□□□□□ -0.45
TPM1-209ENST00000558072 NAT14Q8WUY8 206 aa12.21□□□□□ -0.45
TPM1-209ENST00000558072 ELMO1Q92556 727 aa12.21□□□□□ -0.45
TPM1-209ENST00000558072 SGF29Q96ES7 293 aa12.21□□□□□ -0.45
TPM1-209ENST00000558072 CCDC97Q96F63 343 aaPredicted RBP12.21□□□□□ -0.45
TPM1-209ENST00000558072 APOPT1Q96IL0 206 aa12.21□□□□□ -0.45
TPM1-209ENST00000558072 LOXL4Q96JB6 756 aa12.21□□□□□ -0.45
TPM1-209ENST00000558072 NDNQ99608 321 aa12.21□□□□□ -0.45
TPM1-209ENST00000558072 GPR21Q99679 349 aa12.21□□□□□ -0.45
TPM1-209ENST00000558072 DERL2Q9GZP9 239 aa12.21□□□□□ -0.45
TPM1-209ENST00000558072 DPEP2Q9H4A9 486 aa12.21□□□□□ -0.45
TPM1-209ENST00000558072 KCNK9Q9NPC2 374 aa12.21□□□□□ -0.45
TPM1-209ENST00000558072 TRNAU1APQ9NX07 287 aaKnown RBP12.21□□□□□ -0.45
TPM1-209ENST00000558072 ZNHIT2Q9UHR6 403 aa12.21□□□□□ -0.45
TPM1-209ENST00000558072 EIF2B4Q9UI10 523 aaKnown RBP12.21□□□□□ -0.45
TPM1-209ENST00000558072 RAB23Q9ULC3 237 aa12.21□□□□□ -0.45
TPM1-209ENST00000558072 DGKBQ9Y6T7 804 aa12.21□□□□□ -0.45
TPM1-209ENST00000558072 PLXNB3Q9ULL4 1909 aa12.2□□□□□ -0.46
TPM1-209ENST00000558072 SPTY2D1-AS1A0A0U1RR47 76 aa12.2□□□□□ -0.46
TPM1-209ENST00000558072 PRSS38A1L453 326 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms