RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 FAM153CQ494X1 144 aa3.74□□□□□ -1.81
TDP1-217ENST00000557782 CCDC40Q4G0X9 1142 aa3.74□□□□□ -1.81
TDP1-217ENST00000557782 TSTD2Q5T7W7 516 aa3.74□□□□□ -1.81
TDP1-217ENST00000557782 PRAMEF8Q5VWM4 474 aa3.74□□□□□ -1.81
TDP1-217ENST00000557782 METTL2BQ6P1Q9 378 aaKnown RBP3.74□□□□□ -1.81
TDP1-217ENST00000557782 NOTUMQ6P988 496 aa3.74□□□□□ -1.81
TDP1-217ENST00000557782 SLC27A1Q6PCB7 646 aa3.74□□□□□ -1.81
TDP1-217ENST00000557782 PSRC1Q6PGN9 363 aaPredicted RBP3.74□□□□□ -1.81
TDP1-217ENST00000557782 PIGWQ7Z7B1 504 aa3.74□□□□□ -1.81
TDP1-217ENST00000557782 SFTPA2Q8IWL1 248 aa3.74□□□□□ -1.81
TDP1-217ENST00000557782 CFAP206Q8IYR0 622 aa3.74□□□□□ -1.81
TDP1-217ENST00000557782 ELMOD2Q8IZ81 293 aa3.74□□□□□ -1.81
TDP1-217ENST00000557782 ARL14EPQ8N8R7 260 aaPredicted RBP3.74□□□□□ -1.81
TDP1-217ENST00000557782 B4GALNT2Q8NHY0 566 aa3.74□□□□□ -1.81
TDP1-217ENST00000557782 EXOC6Q8TAG9 804 aa3.74□□□□□ -1.81
TDP1-217ENST00000557782 LRRC8CQ8TDW0 803 aa3.74□□□□□ -1.81
TDP1-217ENST00000557782 SLC25A43Q8WUT9 341 aaPredicted RBP3.74□□□□□ -1.81
TDP1-217ENST00000557782 TMEM186Q96B77 213 aa3.74□□□□□ -1.81
TDP1-217ENST00000557782 AP2M1Q96CW1 435 aa3.74□□□□□ -1.81
TDP1-217ENST00000557782 OTUB1Q96FW1 271 aaPredicted RBP3.74□□□□□ -1.81
TDP1-217ENST00000557782 ZNF419Q96HQ0 510 aaPredicted RBP3.74□□□□□ -1.81
TDP1-217ENST00000557782 METTL2AQ96IZ6 378 aaKnown RBP3.74□□□□□ -1.81
TDP1-217ENST00000557782 ZNF333Q96JL9 665 aa3.74□□□□□ -1.81
TDP1-217ENST00000557782 CLMNQ96JQ2 1002 aa3.74□□□□□ -1.81
TDP1-217ENST00000557782 NSMCE2Q96MF7 247 aa3.74□□□□□ -1.81
TDP1-217ENST00000557782 SLX1AQ9BQ83 275 aa3.74□□□□□ -1.81
TDP1-217ENST00000557782 WDR83Q9BRX9 315 aaKnown RBP3.74□□□□□ -1.81
TDP1-217ENST00000557782 LSG1Q9H089 658 aaKnown RBP3.74□□□□□ -1.81
TDP1-217ENST00000557782 VPS33BQ9H267 617 aa3.74□□□□□ -1.81
TDP1-217ENST00000557782 PPANQ9NQ55 473 aaKnown RBP3.74□□□□□ -1.81
TDP1-217ENST00000557782 CYSLTR2Q9NS75 346 aa3.74□□□□□ -1.81
TDP1-217ENST00000557782 RNF146Q9NTX7 359 aa3.74□□□□□ -1.81
TDP1-217ENST00000557782 ACSS1Q9NUB1 689 aaPredicted RBP3.74□□□□□ -1.81
TDP1-217ENST00000557782 OR6C3Q9NZP0 311 aa3.74□□□□□ -1.81
TDP1-217ENST00000557782 PLEKHB1Q9UF11 243 aaPredicted RBP3.74□□□□□ -1.81
TDP1-217ENST00000557782 MAD2L2Q9UI95 211 aa3.74□□□□□ -1.81
TDP1-217ENST00000557782 TRMT6Q9UJA5 497 aaKnown RBP3.74□□□□□ -1.81
TDP1-217ENST00000557782 WDR37Q9Y2I8 494 aa3.74□□□□□ -1.81
TDP1-217ENST00000557782 NFE2L3Q9Y4A8 694 aa3.74□□□□□ -1.81
TDP1-217ENST00000557782 STON1Q9Y6Q2 735 aa3.74□□□□□ -1.81
TDP1-217ENST00000557782 SLC4A4Q9Y6R1 1079 aa3.74□□□□□ -1.81
TDP1-217ENST00000557782 SYNRGQ9UMZ2 1314 aa3.73□□□□□ -1.81
TDP1-217ENST00000557782 A0A0A6YYC8 382 aaPredicted RBP3.73□□□□□ -1.81
TDP1-217ENST00000557782 TCRBV5S1A1TA0A578 114 aa3.73□□□□□ -1.81
TDP1-217ENST00000557782 ELOVL7A1L3X0 281 aa3.73□□□□□ -1.81
TDP1-217ENST00000557782 PIPSLA2A3N6 862 aa3.73□□□□□ -1.81
TDP1-217ENST00000557782 C5orf51A6NDU8 294 aa3.73□□□□□ -1.81
TDP1-217ENST00000557782 CFAP73A6NFT4 308 aa3.73□□□□□ -1.81
TDP1-217ENST00000557782 FOXO6A8MYZ6 492 aa3.73□□□□□ -1.81
TDP1-217ENST00000557782 PATE3B3GLJ2 98 aa3.73□□□□□ -1.81
TDP1-217ENST00000557782 GPR89AB7ZAQ6 455 aa3.73□□□□□ -1.81
TDP1-217ENST00000557782 KBTBD13C9JR72 458 aa3.73□□□□□ -1.81
TDP1-217ENST00000557782 I3L1I5 382 aaPredicted RBP3.73□□□□□ -1.81
TDP1-217ENST00000557782 RHODO00212 210 aa3.73□□□□□ -1.81
TDP1-217ENST00000557782 O00370 1275 aa3.73□□□□□ -1.81
TDP1-217ENST00000557782 MEIS2O14770 477 aa3.73□□□□□ -1.81
TDP1-217ENST00000557782 SLC16A5O15375 505 aa3.73□□□□□ -1.81
TDP1-217ENST00000557782 RIPK2O43353 540 aa3.73□□□□□ -1.81
TDP1-217ENST00000557782 SSX4O60224 188 aa3.73□□□□□ -1.81
TDP1-217ENST00000557782 ZNF623O75123 536 aa3.73□□□□□ -1.81
TDP1-217ENST00000557782 PRDM1O75626 825 aa3.73□□□□□ -1.81
TDP1-217ENST00000557782 RAD51DO75771 328 aa3.73□□□□□ -1.81
TDP1-217ENST00000557782 RNF8O76064 485 aa3.73□□□□□ -1.81
TDP1-217ENST00000557782 AKR7A3O95154 331 aa3.73□□□□□ -1.81
TDP1-217ENST00000557782 PLAUP00749 431 aa3.73□□□□□ -1.81
TDP1-217ENST00000557782 TGFAP01135 160 aa3.73□□□□□ -1.81
TDP1-217ENST00000557782 GPR89BP0CG08 455 aa3.73□□□□□ -1.81
TDP1-217ENST00000557782 CBSLP0DN79 551 aa3.73□□□□□ -1.81
TDP1-217ENST00000557782 SPP1P10451 314 aa3.73□□□□□ -1.81
TDP1-217ENST00000557782 TCF4P15884 667 aa3.73□□□□□ -1.81
TDP1-217ENST00000557782 CYP11B2P19099 503 aa3.73□□□□□ -1.81
TDP1-217ENST00000557782 ZFP36P26651 326 aaKnown RBP3.73□□□□□ -1.81
TDP1-217ENST00000557782 RPA1P27694 616 aa3.73□□□□□ -1.81
TDP1-217ENST00000557782 CCND2P30279 289 aa3.73□□□□□ -1.81
TDP1-217ENST00000557782 GABRA5P31644 462 aa3.73□□□□□ -1.81
TDP1-217ENST00000557782 CHRNA3P32297 505 aa3.73□□□□□ -1.81
TDP1-217ENST00000557782 SERPINB6P35237 376 aa3.73□□□□□ -1.81
TDP1-217ENST00000557782 CBSP35520 551 aa3.73□□□□□ -1.81
TDP1-217ENST00000557782 MAGEA4P43358 317 aa3.73□□□□□ -1.81
TDP1-217ENST00000557782 ME1P48163 572 aa3.73□□□□□ -1.81
TDP1-217ENST00000557782 SERPINH1P50454 418 aaKnown RBP3.73□□□□□ -1.81
TDP1-217ENST00000557782 ARFIP1P53367 373 aa3.73□□□□□ -1.81
TDP1-217ENST00000557782 RAD23BP54727 409 aa3.73□□□□□ -1.81
TDP1-217ENST00000557782 UCP2P55851 309 aa3.73□□□□□ -1.81
TDP1-217ENST00000557782 PRKCZQ05513 592 aa3.73□□□□□ -1.81
TDP1-217ENST00000557782 FAM27E3Q08E93 113 aa3.73□□□□□ -1.81
TDP1-217ENST00000557782 MAD2L1Q13257 205 aaPredicted RBP3.73□□□□□ -1.81
TDP1-217ENST00000557782 TNK1Q13470 666 aa3.73□□□□□ -1.81
TDP1-217ENST00000557782 PKP1Q13835 747 aa3.73□□□□□ -1.81
TDP1-217ENST00000557782 DPYSQ14117 519 aa3.73□□□□□ -1.81
TDP1-217ENST00000557782 MELKQ14680 651 aa3.73□□□□□ -1.81
TDP1-217ENST00000557782 LPIN1Q14693 890 aa3.73□□□□□ -1.81
TDP1-217ENST00000557782 MVPQ14764 893 aaKnown RBP3.73□□□□□ -1.81
TDP1-217ENST00000557782 KCNA10Q16322 511 aa3.73□□□□□ -1.81
TDP1-217ENST00000557782 CERKLQ49MI3 558 aaPredicted RBP3.73□□□□□ -1.81
TDP1-217ENST00000557782 CEP55Q53EZ4 464 aa3.73□□□□□ -1.81
TDP1-217ENST00000557782 FASTKD1Q53R41 847 aaKnown RBP3.73□□□□□ -1.81
TDP1-217ENST00000557782 AWAT1Q58HT5 328 aa3.73□□□□□ -1.81
TDP1-217ENST00000557782 DCAF6Q58WW2 860 aa3.73□□□□□ -1.81
TDP1-217ENST00000557782 TTC39AQ5SRH9 613 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms