RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 NOMO1Q15155 1222 aa15.62■□□□□ 0.09
SCFD1-224ENST00000557713 RPE65Q16518 533 aa15.62■□□□□ 0.09
SCFD1-224ENST00000557713 TAZQ16635 292 aa15.62■□□□□ 0.09
SCFD1-224ENST00000557713 SIRPB2Q5JXA9 342 aa15.62■□□□□ 0.09
SCFD1-224ENST00000557713 ZDHHC20Q5W0Z9 365 aa15.62■□□□□ 0.09
SCFD1-224ENST00000557713 PWWP2BQ6NUJ5 590 aa15.62■□□□□ 0.09
SCFD1-224ENST00000557713 CYB5D1Q6P9G0 228 aa15.62■□□□□ 0.09
SCFD1-224ENST00000557713 MFSD7Q6UXD7 560 aa15.62■□□□□ 0.09
SCFD1-224ENST00000557713 FAM83HQ6ZRV2 1179 aaPredicted RBP15.62■□□□□ 0.09
SCFD1-224ENST00000557713 AMZ2Q86W34 360 aa15.62■□□□□ 0.09
SCFD1-224ENST00000557713 GPR150Q8NGU9 434 aa15.62■□□□□ 0.09
SCFD1-224ENST00000557713 CT55Q8WUE5 264 aa15.62■□□□□ 0.09
SCFD1-224ENST00000557713 TTC25Q96NG3 672 aa15.62■□□□□ 0.09
SCFD1-224ENST00000557713 DEF6Q9H4E7 631 aa15.62■□□□□ 0.09
SCFD1-224ENST00000557713 AKIRIN1Q9H9L7 192 aaPredicted RBP15.62■□□□□ 0.09
SCFD1-224ENST00000557713 UGT1A7Q9HAW7 530 aa15.62■□□□□ 0.09
SCFD1-224ENST00000557713 UGT1A10Q9HAW8 530 aa15.62■□□□□ 0.09
SCFD1-224ENST00000557713 UGT1A8Q9HAW9 530 aa15.62■□□□□ 0.09
SCFD1-224ENST00000557713 PDE7BQ9NP56 450 aa15.62■□□□□ 0.09
SCFD1-224ENST00000557713 DDX56Q9NY93 547 aaKnown RBP15.62■□□□□ 0.09
SCFD1-224ENST00000557713 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.62■□□□□ 0.095e-7■■■□□ 17.9
SCFD1-224ENST00000557713 FAM153AQ9UHL3 310 aa15.62■□□□□ 0.09
SCFD1-224ENST00000557713 TLK1Q9UKI8 766 aa15.62■□□□□ 0.09
SCFD1-224ENST00000557713 MAN2B2Q9Y2E5 1009 aa15.62■□□□□ 0.09
SCFD1-224ENST00000557713 DNMT3AQ9Y6K1 912 aaPredicted RBP15.62■□□□□ 0.09
SCFD1-224ENST00000557713 C21orf140B9A014 251 aa15.61■□□□□ 0.09
SCFD1-224ENST00000557713 MTSS1O43312 755 aa15.61■□□□□ 0.09
SCFD1-224ENST00000557713 AKR1B10O60218 316 aa15.61■□□□□ 0.09
SCFD1-224ENST00000557713 RFPL1O75677 317 aa15.61■□□□□ 0.09
SCFD1-224ENST00000557713 NFKB1P19838 968 aa15.61■□□□□ 0.09
SCFD1-224ENST00000557713 CTSCP53634 463 aa15.61■□□□□ 0.09
SCFD1-224ENST00000557713 PMS2P54278 862 aa15.61■□□□□ 0.09
SCFD1-224ENST00000557713 WNT3AP56704 352 aa15.61■□□□□ 0.09
SCFD1-224ENST00000557713 TUBB3Q13509 450 aa15.61■□□□□ 0.09
SCFD1-224ENST00000557713 CHRNA6Q15825 494 aa15.61■□□□□ 0.09
SCFD1-224ENST00000557713 TMEM220Q6QAJ8 160 aa15.61■□□□□ 0.09
SCFD1-224ENST00000557713 ASB18Q6ZVZ8 466 aa15.61■□□□□ 0.09
SCFD1-224ENST00000557713 BZW1Q7L1Q6 419 aaKnown RBP15.61■□□□□ 0.09
SCFD1-224ENST00000557713 BPHLQ86WA6 291 aaPredicted RBP15.61■□□□□ 0.09
SCFD1-224ENST00000557713 APLFQ8IW19 511 aaPredicted RBP15.61■□□□□ 0.09
SCFD1-224ENST00000557713 RHOT2Q8IXI1 618 aa15.61■□□□□ 0.09
SCFD1-224ENST00000557713 RHOT1Q8IXI2 618 aa15.61■□□□□ 0.09
SCFD1-224ENST00000557713 TEX19Q8NA77 164 aa15.61■□□□□ 0.09
SCFD1-224ENST00000557713 SIDT2Q8NBJ9 832 aaKnown RBP15.61■□□□□ 0.09
SCFD1-224ENST00000557713 DDHD1Q8NEL9 900 aa15.61■□□□□ 0.09
SCFD1-224ENST00000557713 MRGPRX2Q96LB1 330 aa15.61■□□□□ 0.09
SCFD1-224ENST00000557713 CHP1Q99653 195 aa15.61■□□□□ 0.09
SCFD1-224ENST00000557713 RARRES3Q9UL19 164 aa15.61■□□□□ 0.09
SCFD1-224ENST00000557713 PSMD13Q9UNM6 376 aa15.61■□□□□ 0.09
SCFD1-224ENST00000557713 GAPDHSO14556 408 aaPredicted RBP15.6■□□□□ 0.09
SCFD1-224ENST00000557713 GPR39O43194 453 aa15.6■□□□□ 0.09
SCFD1-224ENST00000557713 PDGFAP04085 211 aa15.6■□□□□ 0.09
SCFD1-224ENST00000557713 GP1BBP13224 206 aa15.6■□□□□ 0.09
SCFD1-224ENST00000557713 PECAM1P16284 738 aaPredicted RBP15.6■□□□□ 0.09
SCFD1-224ENST00000557713 SPAM1P38567 509 aa15.6■□□□□ 0.09
SCFD1-224ENST00000557713 CDKN2BP42772 138 aa15.6■□□□□ 0.09
SCFD1-224ENST00000557713 SLC1A1P43005 524 aa15.6■□□□□ 0.09
SCFD1-224ENST00000557713 CHRNA4P43681 627 aa15.6■□□□□ 0.09
SCFD1-224ENST00000557713 MLLT10P55197 1068 aa15.6■□□□□ 0.09
SCFD1-224ENST00000557713 SEMA5AQ13591 1074 aa15.6■□□□□ 0.09
SCFD1-224ENST00000557713 KCNAB1Q14722 419 aa15.6■□□□□ 0.09
SCFD1-224ENST00000557713 TCEAL1Q15170 157 aa15.6■□□□□ 0.09
SCFD1-224ENST00000557713 LDLRAP1Q5SW96 308 aa15.6■□□□□ 0.09
SCFD1-224ENST00000557713 METRNLQ641Q3 311 aa15.6■□□□□ 0.09
SCFD1-224ENST00000557713 FAM199XQ6PEV8 388 aaPredicted RBP15.6■□□□□ 0.09
SCFD1-224ENST00000557713 KLHL35Q6PF15 583 aa15.6■□□□□ 0.09
SCFD1-224ENST00000557713 FAM151BQ6UXP7 276 aa15.6■□□□□ 0.09
SCFD1-224ENST00000557713 CERS6Q6ZMG9 384 aa15.6■□□□□ 0.09
SCFD1-224ENST00000557713 KMT5CQ86Y97 462 aa15.6■□□□□ 0.09
SCFD1-224ENST00000557713 FAM26EQ8N5C1 309 aa15.6■□□□□ 0.09
SCFD1-224ENST00000557713 SLC25A41Q8N5S1 370 aa15.6■□□□□ 0.09
SCFD1-224ENST00000557713 TFB1MQ8WVM0 346 aaKnown RBP15.6■□□□□ 0.09
SCFD1-224ENST00000557713 PSMG3-AS1Q96PY0 264 aa15.6■□□□□ 0.09
SCFD1-224ENST00000557713 FCRL5Q96RD9 977 aa15.6■□□□□ 0.09
SCFD1-224ENST00000557713 RUFY1Q96T51 708 aa15.6■□□□□ 0.09
SCFD1-224ENST00000557713 MAP3K3Q99759 626 aa15.6■□□□□ 0.09
SCFD1-224ENST00000557713 GPR87Q9BY21 358 aa15.6■□□□□ 0.09
SCFD1-224ENST00000557713 ZCCHC2Q9C0B9 1178 aaKnown RBP15.6■□□□□ 0.09
SCFD1-224ENST00000557713 ACTL8Q9H568 366 aa15.6■□□□□ 0.09
SCFD1-224ENST00000557713 SPTLC3Q9NUV7 552 aa15.6■□□□□ 0.09
SCFD1-224ENST00000557713 HACD3Q9P035 362 aa15.6■□□□□ 0.09
SCFD1-224ENST00000557713 HYOU1Q9Y4L1 999 aa15.6■□□□□ 0.09
SCFD1-224ENST00000557713 DOPEY2Q9Y3R5 2298 aa15.59■□□□□ 0.09
SCFD1-224ENST00000557713 GLYATL1P3A0A0U1RQE8 302 aa15.59■□□□□ 0.09
SCFD1-224ENST00000557713 CST8O60676 142 aa15.59■□□□□ 0.09
SCFD1-224ENST00000557713 NTRK1P04629 796 aa15.59■□□□□ 0.09
SCFD1-224ENST00000557713 EBLN1P0CF75 366 aa15.59■□□□□ 0.09
SCFD1-224ENST00000557713 TNNT1P13805 278 aa15.59■□□□□ 0.09
SCFD1-224ENST00000557713 ACY1Q03154 408 aa15.59■□□□□ 0.09
SCFD1-224ENST00000557713 ADCY2Q08462 1091 aa15.59■□□□□ 0.09
SCFD1-224ENST00000557713 LAMB3Q13751 1172 aa15.59■□□□□ 0.09
SCFD1-224ENST00000557713 TFDP2Q14188 446 aa15.59■□□□□ 0.09
SCFD1-224ENST00000557713 NFE2L1Q14494 772 aa15.59■□□□□ 0.09
SCFD1-224ENST00000557713 SLC1A5Q15758 541 aa15.59■□□□□ 0.09
SCFD1-224ENST00000557713 PPP2R5EQ16537 467 aa15.59■□□□□ 0.09
SCFD1-224ENST00000557713 ODF2Q5BJF6 829 aa15.59■□□□□ 0.09
SCFD1-224ENST00000557713 GPRC6AQ5T6X5 926 aa15.59■□□□□ 0.09
SCFD1-224ENST00000557713 ZNF567Q8N184 647 aa15.59■□□□□ 0.09
SCFD1-224ENST00000557713 D2HGDHQ8N465 521 aa15.59■□□□□ 0.09
SCFD1-224ENST00000557713 OXNAD1Q96HP4 312 aaPredicted RBP15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms