RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 BCL7AQ4VC05 210 aa15.04■□□□□ -0
NEDD1-213ENST00000557644 ZNF549Q6P9A3 640 aa15.04■□□□□ -0
NEDD1-213ENST00000557644 KIAA0408Q6ZU52 694 aa15.04■□□□□ -0
NEDD1-213ENST00000557644 NRROSQ86YC3 692 aa15.04■□□□□ -0
NEDD1-213ENST00000557644 KRT222Q8N1A0 295 aa15.04■□□□□ -0
NEDD1-213ENST00000557644 SLC25A45Q8N413 288 aa15.04■□□□□ -0
NEDD1-213ENST00000557644 OXR1Q8N573 874 aa15.04■□□□□ -0
NEDD1-213ENST00000557644 LILRA3Q8N6C8 439 aaPredicted RBP15.04■□□□□ -0
NEDD1-213ENST00000557644 TRNAU1APQ9NX07 287 aaKnown RBP15.04■□□□□ -0
NEDD1-213ENST00000557644 GFRA3O60609 400 aa15.04■□□□□ -0
NEDD1-213ENST00000557644 UAP1Q16222 522 aaPredicted RBP15.04■□□□□ -0
NEDD1-213ENST00000557644 INSCQ1MX18 579 aa15.04■□□□□ -0
NEDD1-213ENST00000557644 AASDHQ4L235 1098 aaPredicted RBP15.04■□□□□ -0
NEDD1-213ENST00000557644 ZNF449Q6P9G9 518 aa15.04■□□□□ -0
NEDD1-213ENST00000557644 SLC30A9Q6PML9 568 aa15.04■□□□□ -0
NEDD1-213ENST00000557644 MYRIPQ8NFW9 859 aa15.04■□□□□ -0
NEDD1-213ENST00000557644 SAP25Q8TEE9 199 aa15.04■□□□□ -0
NEDD1-213ENST00000557644 UBLCP1Q8WVY7 318 aaPredicted RBP15.04■□□□□ -0
NEDD1-213ENST00000557644 CDKL2Q92772 493 aa15.04■□□□□ -0
NEDD1-213ENST00000557644 ZNF514Q96K75 400 aaPredicted RBP15.04■□□□□ -0
NEDD1-213ENST00000557644 NDNQ99608 321 aa15.04■□□□□ -0
NEDD1-213ENST00000557644 KLC4Q9NSK0 619 aa15.04■□□□□ -0
NEDD1-213ENST00000557644 PFDN6O15212 129 aa15.03■□□□□ -0
NEDD1-213ENST00000557644 AQP9O43315 295 aa15.03■□□□□ -0
NEDD1-213ENST00000557644 NIPSNAP2O75323 286 aa15.03■□□□□ -0
NEDD1-213ENST00000557644 AP2A2O94973 939 aa15.03■□□□□ -0
NEDD1-213ENST00000557644 CCT8P50990 548 aa15.03■□□□□ -0
NEDD1-213ENST00000557644 PTRHD1Q6GMV3 140 aaKnown RBP15.03■□□□□ -0
NEDD1-213ENST00000557644 EMBQ6PCB8 327 aa15.03■□□□□ -0
NEDD1-213ENST00000557644 FAM83HQ6ZRV2 1179 aaPredicted RBP15.03■□□□□ -0
NEDD1-213ENST00000557644 GABPB2Q8TAK5 448 aaPredicted RBP15.03■□□□□ -0
NEDD1-213ENST00000557644 GPBAR1Q8TDU6 330 aa15.03■□□□□ -0
NEDD1-213ENST00000557644 FUT8Q9BYC5 575 aa15.03■□□□□ -0
NEDD1-213ENST00000557644 ACSS3Q9H6R3 686 aa15.03■□□□□ -0
NEDD1-213ENST00000557644 SPASTQ9UBP0 616 aa15.03■□□□□ -0
NEDD1-213ENST00000557644 FFAR2O15552 330 aa15.03■□□□□ -0
NEDD1-213ENST00000557644 DFNA5O60443 496 aa15.03■□□□□ -0
NEDD1-213ENST00000557644 TRIM16O95361 564 aa15.03■□□□□ -0
NEDD1-213ENST00000557644 OR56A5P0C7T3 313 aa15.03■□□□□ -0
NEDD1-213ENST00000557644 RPS3P23396 243 aaKnown RBP eCLIP15.03■□□□□ -0
NEDD1-213ENST00000557644 PGGT1BP53609 377 aa15.03■□□□□ -0
NEDD1-213ENST00000557644 ADARP55265 1226 aaKnown RBP15.03■□□□□ -0
NEDD1-213ENST00000557644 NFE2L1Q14494 772 aa15.03■□□□□ -0
NEDD1-213ENST00000557644 RBM20Q5T481 1227 aaKnown RBP15.03■□□□□ -0
NEDD1-213ENST00000557644 XKR5Q6UX68 686 aa15.03■□□□□ -0
NEDD1-213ENST00000557644 KANSL1Q7Z3B3 1105 aa15.03■□□□□ -0
NEDD1-213ENST00000557644 TAF8Q7Z7C8 310 aa15.03■□□□□ -0
NEDD1-213ENST00000557644 AMZ2Q86W34 360 aa15.03■□□□□ -0
NEDD1-213ENST00000557644 SLC26A11Q86WA9 606 aa15.03■□□□□ -0
NEDD1-213ENST00000557644 SFTPA2Q8IWL1 248 aa15.03■□□□□ -0
NEDD1-213ENST00000557644 ACVR1CQ8NER5 493 aa15.03■□□□□ -0
NEDD1-213ENST00000557644 SCG3Q8WXD2 468 aaKnown RBP15.03■□□□□ -0
NEDD1-213ENST00000557644 CYTH2Q99418 400 aa15.03■□□□□ -0
NEDD1-213ENST00000557644 OSGEPL1Q9H4B0 414 aa15.03■□□□□ -0
NEDD1-213ENST00000557644 GALPQ9UBC7 116 aa15.03■□□□□ -0
NEDD1-213ENST00000557644 GNPTGQ9UJJ9 305 aa15.03■□□□□ -0
NEDD1-213ENST00000557644 VPS9D1Q9Y2B5 631 aa15.03■□□□□ -0
NEDD1-213ENST00000557644 MED16Q9Y2X0 877 aa15.03■□□□□ -0
NEDD1-213ENST00000557644 PIKFYVEQ9Y2I7 2098 aa15.03■□□□□ -0
NEDD1-213ENST00000557644 A0A087WUV0 522 aaPredicted RBP15.02■□□□□ -0
NEDD1-213ENST00000557644 ESR1P03372 595 aa15.02■□□□□ -0
NEDD1-213ENST00000557644 TUBBP07437 444 aa15.02■□□□□ -0
NEDD1-213ENST00000557644 PKMP14618 531 aaKnown RBP15.02■□□□□ -0
NEDD1-213ENST00000557644 ACTR1BP42025 376 aa15.02■□□□□ -0
NEDD1-213ENST00000557644 CD151P48509 253 aa15.02■□□□□ -0
NEDD1-213ENST00000557644 ACTR1AP61163 376 aa15.02■□□□□ -0
NEDD1-213ENST00000557644 ILF3Q12906 894 aaKnown RBP eCLIP15.02■□□□□ -0
NEDD1-213ENST00000557644 BRD3Q15059 726 aa15.02■□□□□ -0
NEDD1-213ENST00000557644 DEFB133Q30KQ1 61 aa15.02■□□□□ -0
NEDD1-213ENST00000557644 ZC3HC1Q86WB0 502 aaKnown RBP15.02■□□□□ -0
NEDD1-213ENST00000557644 CAVIN3Q969G5 261 aa15.02■□□□□ -0
NEDD1-213ENST00000557644 LINC00615Q96LM1 132 aaPredicted RBP15.02■□□□□ -0
NEDD1-213ENST00000557644 CCM2Q9BSQ5 444 aa15.02■□□□□ -0
NEDD1-213ENST00000557644 MCMBPQ9BTE3 642 aa15.02■□□□□ -0
NEDD1-213ENST00000557644 DNAAF2Q9NVR5 837 aaKnown RBP15.02■□□□□ -0
NEDD1-213ENST00000557644 YY2O15391 372 aa15.02□□□□□ -0.01
NEDD1-213ENST00000557644 ABHD2P08910 425 aa15.02□□□□□ -0.01
NEDD1-213ENST00000557644 GIMD1P0DJR0 217 aa15.02□□□□□ -0.01
NEDD1-213ENST00000557644 CCR7P32248 378 aa15.02□□□□□ -0.01
NEDD1-213ENST00000557644 HSD17B3P37058 310 aa15.02□□□□□ -0.01
NEDD1-213ENST00000557644 ARHGAP8P85298 464 aa15.02□□□□□ -0.01
NEDD1-213ENST00000557644 LRP8Q14114 963 aa15.02□□□□□ -0.01
NEDD1-213ENST00000557644 ELOCQ15369 112 aa15.02□□□□□ -0.01
NEDD1-213ENST00000557644 SEPT7Q16181 437 aaKnown RBP15.02□□□□□ -0.01
NEDD1-213ENST00000557644 UAP1L1Q3KQV9 507 aa15.02□□□□□ -0.01
NEDD1-213ENST00000557644 ZNF658BQ4V348 819 aaPredicted RBP15.02□□□□□ -0.01
NEDD1-213ENST00000557644 GALNT7Q86SF2 657 aa15.02□□□□□ -0.01
NEDD1-213ENST00000557644 LRRC6Q86X45 466 aa15.02□□□□□ -0.01
NEDD1-213ENST00000557644 OR2L2Q8NH16 312 aa15.02□□□□□ -0.01
NEDD1-213ENST00000557644 TIMM29Q9BSF4 260 aa15.02□□□□□ -0.01
NEDD1-213ENST00000557644 TMEM9BQ9NQ34 198 aa15.02□□□□□ -0.01
NEDD1-213ENST00000557644 PCDHB1Q9Y5F3 818 aa15.02□□□□□ -0.01
NEDD1-213ENST00000557644 MGAT4DA6NG13 374 aa15.01□□□□□ -0.01
NEDD1-213ENST00000557644 C4orf47A7E2U8 309 aa15.01□□□□□ -0.01
NEDD1-213ENST00000557644 EML2O95834 649 aa15.01□□□□□ -0.01
NEDD1-213ENST00000557644 SHBGP04278 402 aa15.01□□□□□ -0.01
NEDD1-213ENST00000557644 RPL10P27635 214 aaKnown RBP15.01□□□□□ -0.01
NEDD1-213ENST00000557644 CSE1LP55060 971 aaKnown RBP15.01□□□□□ -0.01
NEDD1-213ENST00000557644 CFAP206Q8IYR0 622 aa15.01□□□□□ -0.01
NEDD1-213ENST00000557644 KIAA2013Q8IYS2 634 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms