RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 LLGL2Q6P1M3 1020 aa8.75□□□□□ -1.01
SYNE3-205ENST00000557275 TSPAN33Q86UF1 283 aa8.75□□□□□ -1.01
SYNE3-205ENST00000557275 ADAMTS15Q8TE58 950 aa8.75□□□□□ -1.01
SYNE3-205ENST00000557275 BAP1Q92560 729 aa8.75□□□□□ -1.01
SYNE3-205ENST00000557275 SAV1Q9H4B6 383 aaPredicted RBP8.75□□□□□ -1.01
SYNE3-205ENST00000557275 B3GAT2Q9NPZ5 323 aa8.75□□□□□ -1.01
SYNE3-205ENST00000557275 IFNA5P01569 189 aa8.75□□□□□ -1.01
SYNE3-205ENST00000557275 C8BP07358 591 aa8.75□□□□□ -1.01
SYNE3-205ENST00000557275 VLDLRP98155 873 aa8.75□□□□□ -1.01
SYNE3-205ENST00000557275 TLE2Q04725 743 aa8.75□□□□□ -1.01
SYNE3-205ENST00000557275 ZNF169Q14929 603 aaPredicted RBP8.75□□□□□ -1.01
SYNE3-205ENST00000557275 ZNF420Q8TAQ5 688 aaPredicted RBP8.75□□□□□ -1.01
SYNE3-205ENST00000557275 ALG2Q9H553 416 aa8.75□□□□□ -1.01
SYNE3-205ENST00000557275 PNO1Q9NRX1 252 aaKnown RBP8.75□□□□□ -1.01
SYNE3-205ENST00000557275 MKS1Q9NXB0 559 aa8.75□□□□□ -1.01
SYNE3-205ENST00000557275 STMND1H3BQB6 276 aa8.75□□□□□ -1.01
SYNE3-205ENST00000557275 H6PDO95479 791 aa8.75□□□□□ -1.01
SYNE3-205ENST00000557275 ERCC1P07992 297 aaPredicted RBP8.75□□□□□ -1.01
SYNE3-205ENST00000557275 CHKAP35790 457 aa8.75□□□□□ -1.01
SYNE3-205ENST00000557275 RPL38P63173 70 aaKnown RBP8.75□□□□□ -1.01
SYNE3-205ENST00000557275 RAD9BQ6WBX8 426 aa8.75□□□□□ -1.01
SYNE3-205ENST00000557275 AHSA2Q719I0 299 aa8.75□□□□□ -1.01
SYNE3-205ENST00000557275 C22orf15Q8WYQ4 148 aa8.75□□□□□ -1.01
SYNE3-205ENST00000557275 H7C417 338 aa8.75□□□□□ -1.01
SYNE3-205ENST00000557275 ZBTB11O95625 1053 aaPredicted RBP8.75□□□□□ -1.01
SYNE3-205ENST00000557275 AKR1C8PQ5T2L2 129 aa8.75□□□□□ -1.01
SYNE3-205ENST00000557275 GPAT4Q86UL3 456 aa8.75□□□□□ -1.01
SYNE3-205ENST00000557275 LRRC58Q96CX6 371 aa8.75□□□□□ -1.01
SYNE3-205ENST00000557275 ZNF578Q96N58 590 aaPredicted RBP8.75□□□□□ -1.01
SYNE3-205ENST00000557275 ZNF670Q9BS34 389 aa8.75□□□□□ -1.01
SYNE3-205ENST00000557275 IDI2Q9BXS1 227 aa8.75□□□□□ -1.01
SYNE3-205ENST00000557275 CHRAC1Q9NRG0 131 aa8.75□□□□□ -1.01
SYNE3-205ENST00000557275 PDP1Q9P0J1 537 aaPredicted RBP8.75□□□□□ -1.01
SYNE3-205ENST00000557275 RNF17Q9BXT8 1623 aaKnown RBP8.75□□□□□ -1.01
SYNE3-205ENST00000557275 CLCN7P51798 805 aa8.75□□□□□ -1.01
SYNE3-205ENST00000557275 EFCAB3Q8N7B9 438 aa8.75□□□□□ -1.01
SYNE3-205ENST00000557275 SULT4A1Q9BR01 284 aa8.75□□□□□ -1.01
SYNE3-205ENST00000557275 CXorf21Q9HAI6 301 aa8.75□□□□□ -1.01
SYNE3-205ENST00000557275 USP6P35125 1406 aa8.75□□□□□ -1.01
SYNE3-205ENST00000557275 CD79BP40259 229 aa8.75□□□□□ -1.01
SYNE3-205ENST00000557275 MAGEA8P43361 318 aa8.75□□□□□ -1.01
SYNE3-205ENST00000557275 MAD2L1BPQ15013 274 aaPredicted RBP8.75□□□□□ -1.01
SYNE3-205ENST00000557275 CAPN13Q6MZZ7 669 aaPredicted RBP8.75□□□□□ -1.01
SYNE3-205ENST00000557275 TBC1D10CQ8IV04 446 aa8.75□□□□□ -1.01
SYNE3-205ENST00000557275 ALG9Q9H6U8 611 aa8.75□□□□□ -1.01
SYNE3-205ENST00000557275 ADCY10Q96PN6 1610 aa8.75□□□□□ -1.01
SYNE3-205ENST00000557275 ZBTB22O15209 634 aa8.75□□□□□ -1.01
SYNE3-205ENST00000557275 UGT1A3P35503 534 aa8.75□□□□□ -1.01
SYNE3-205ENST00000557275 SOX9P48436 509 aa8.75□□□□□ -1.01
SYNE3-205ENST00000557275 RAB5CP51148 216 aa8.75□□□□□ -1.01
SYNE3-205ENST00000557275 SBK1Q52WX2 424 aa8.75□□□□□ -1.01
SYNE3-205ENST00000557275 ZNF808Q8N4W9 903 aaPredicted RBP8.75□□□□□ -1.01
SYNE3-205ENST00000557275 OR7D4Q8NG98 312 aa8.75□□□□□ -1.01
SYNE3-205ENST00000557275 BTBD2Q9BX70 525 aa8.75□□□□□ -1.01
SYNE3-205ENST00000557275 CISHQ9NSE2 258 aa8.75□□□□□ -1.01
SYNE3-205ENST00000557275 FAM86C1Q9NVL1 165 aa8.75□□□□□ -1.01
SYNE3-205ENST00000557275 BRWD1Q9NSI6 2320 aa8.75□□□□□ -1.01
SYNE3-205ENST00000557275 CSTBP04080 98 aaKnown RBP8.75□□□□□ -1.01
SYNE3-205ENST00000557275 CETPP11597 493 aa8.75□□□□□ -1.01
SYNE3-205ENST00000557275 TPH1P17752 444 aa8.75□□□□□ -1.01
SYNE3-205ENST00000557275 GLDCP23378 1020 aa8.75□□□□□ -1.01
SYNE3-205ENST00000557275 VAMP1P23763 118 aa8.75□□□□□ -1.01
SYNE3-205ENST00000557275 GALK1P51570 392 aa8.75□□□□□ -1.01
SYNE3-205ENST00000557275 SMARCB1Q12824 385 aa8.75□□□□□ -1.01
SYNE3-205ENST00000557275 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.75□□□□□ -1.01
SYNE3-205ENST00000557275 ZSWIM2Q8NEG5 633 aa8.75□□□□□ -1.01
SYNE3-205ENST00000557275 GPRC5AQ8NFJ5 357 aa8.75□□□□□ -1.01
SYNE3-205ENST00000557275 CXorf40AQ8TE69 158 aa8.75□□□□□ -1.01
SYNE3-205ENST00000557275 DENND1AQ8TEH3 1009 aa8.75□□□□□ -1.01
SYNE3-205ENST00000557275 OR14A2Q96R54 314 aa8.75□□□□□ -1.01
SYNE3-205ENST00000557275 AGAP2Q99490 1192 aa8.75□□□□□ -1.01
SYNE3-205ENST00000557275 TLR6Q9Y2C9 796 aa8.75□□□□□ -1.01
SYNE3-205ENST00000557275 HEBP2Q9Y5Z4 205 aa8.75□□□□□ -1.01
SYNE3-205ENST00000557275 UGT2B4P06133 528 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 TKTL1P51854 596 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 LIMK2P53671 638 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 ARFRP1Q13795 201 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 FAM83AQ86UY5 434 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 CHAC2Q8WUX2 184 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 PCDHB5Q9Y5E4 795 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 SCN2BO60939 215 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 CRTAPO75718 401 aaPredicted RBP8.74□□□□□ -1.01
SYNE3-205ENST00000557275 CYP11B2P19099 503 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 MASP1P48740 699 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 TUBP50607 506 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 AUHQ13825 339 aaKnown RBP8.74□□□□□ -1.01
SYNE3-205ENST00000557275 INAVAQ3KP66 663 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 ZNF410Q86VK4 478 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 DNASE1L2Q92874 299 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 SPTLC1O15269 473 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 NRIP1P48552 1158 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 SLC3A1Q07837 685 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 IDNKQ5T6J7 187 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 TOP1MTQ969P6 601 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 BORCS8Q96FH0 119 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 ZSCAN5AQ9BUG6 496 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 SEMA4AQ9H3S1 761 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 MTMR4Q9NYA4 1195 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 DGKBQ9Y6T7 804 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 FAM230AA0A1W2PPH8 454 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms