RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 INPP4BO15327 924 aa8.54□□□□□ -1.04
VRK1-206ENST00000557222 GRID2O43424 1007 aa8.54□□□□□ -1.04
VRK1-206ENST00000557222 TNFRSF21O75509 655 aa8.54□□□□□ -1.04
VRK1-206ENST00000557222 CLDN7O95471 211 aa8.54□□□□□ -1.04
VRK1-206ENST00000557222 EML2O95834 649 aa8.54□□□□□ -1.04
VRK1-206ENST00000557222 MT-ND3P03897 115 aa8.54□□□□□ -1.04
VRK1-206ENST00000557222 OAS2P29728 719 aaKnown RBP8.54□□□□□ -1.04
VRK1-206ENST00000557222 PPM1FP49593 454 aaPredicted RBP8.54□□□□□ -1.04
VRK1-206ENST00000557222 ARSEP51690 589 aa8.54□□□□□ -1.04
VRK1-206ENST00000557222 DCDC1P59894 354 aa8.54□□□□□ -1.04
VRK1-206ENST00000557222 SLC25A11Q02978 314 aaKnown RBP8.54□□□□□ -1.04
VRK1-206ENST00000557222 ITKQ08881 620 aa8.54□□□□□ -1.04
VRK1-206ENST00000557222 NFATC2Q13469 925 aa8.54□□□□□ -1.04
VRK1-206ENST00000557222 KRT81Q14533 505 aa8.54□□□□□ -1.04
VRK1-206ENST00000557222 PDK2Q15119 407 aa8.54□□□□□ -1.04
VRK1-206ENST00000557222 PTPRRQ15256 657 aa8.54□□□□□ -1.04
VRK1-206ENST00000557222 DEFB109BQ30KR1 87 aa8.54□□□□□ -1.04
VRK1-206ENST00000557222 FIGNQ5HY92 759 aa8.54□□□□□ -1.04
VRK1-206ENST00000557222 SNAP47Q5SQN1 464 aa8.54□□□□□ -1.04
VRK1-206ENST00000557222 C6orf15Q6UXA7 325 aaPredicted RBP8.54□□□□□ -1.04
VRK1-206ENST00000557222 WASH2PQ6VEQ5 465 aa8.54□□□□□ -1.04
VRK1-206ENST00000557222 Q6ZS46 218 aa8.54□□□□□ -1.04
VRK1-206ENST00000557222 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.54□□□□□ -1.04
VRK1-206ENST00000557222 TRIM74Q86UV6 250 aa8.54□□□□□ -1.04
VRK1-206ENST00000557222 ZNF761Q86XN6 746 aaPredicted RBP8.54□□□□□ -1.04
VRK1-206ENST00000557222 PHYKPLQ8IUZ5 450 aa8.54□□□□□ -1.04
VRK1-206ENST00000557222 MAP7D3Q8IWC1 876 aa8.54□□□□□ -1.04
VRK1-206ENST00000557222 ARRDC2Q8TBH0 407 aa8.54□□□□□ -1.04
VRK1-206ENST00000557222 SEC14L1Q92503 715 aa8.54□□□□□ -1.04
VRK1-206ENST00000557222 SYN2Q92777 582 aaPredicted RBP8.54□□□□□ -1.04
VRK1-206ENST00000557222 MIB2Q96AX9 1013 aa8.54□□□□□ -1.04
VRK1-206ENST00000557222 C9orf72Q96LT7 481 aa8.54□□□□□ -1.04
VRK1-206ENST00000557222 FCRL4Q96PJ5 515 aa8.54□□□□□ -1.04
VRK1-206ENST00000557222 WDR24Q96S15 920 aa8.54□□□□□ -1.04
VRK1-206ENST00000557222 SRPK1Q96SB4 655 aaKnown RBP8.54□□□□□ -1.04
VRK1-206ENST00000557222 CTRCQ99895 268 aa8.54□□□□□ -1.04
VRK1-206ENST00000557222 MLPHQ9BV36 600 aaPredicted RBP8.54□□□□□ -1.04
VRK1-206ENST00000557222 ADGRE3Q9BY15 652 aa8.54□□□□□ -1.04
VRK1-206ENST00000557222 ZNF768Q9H5H4 540 aaKnown RBP8.54□□□□□ -1.04
VRK1-206ENST00000557222 TRIM39Q9HCM9 518 aa8.54□□□□□ -1.04
VRK1-206ENST00000557222 WASH6PQ9NQA3 447 aa8.54□□□□□ -1.04
VRK1-206ENST00000557222 RBM22Q9NW64 420 aaKnown RBP eCLIP8.54□□□□□ -1.047e-6■■■■□ 24.6
VRK1-206ENST00000557222 NFKBIL1Q9UBC1 381 aaPredicted RBP8.54□□□□□ -1.04
VRK1-206ENST00000557222 MYO1AQ9UBC5 1043 aa8.54□□□□□ -1.04
VRK1-206ENST00000557222 EPHA6Q9UF33 1036 aa8.54□□□□□ -1.04
VRK1-206ENST00000557222 LCMT1Q9UIC8 334 aa8.54□□□□□ -1.04
VRK1-206ENST00000557222 CHKBQ9Y259 395 aa8.54□□□□□ -1.04
VRK1-206ENST00000557222 PCDHGA6Q9Y5G7 932 aa8.54□□□□□ -1.04
VRK1-206ENST00000557222 OAS3Q9Y6K5 1087 aaKnown RBP8.54□□□□□ -1.04
VRK1-206ENST00000557222 RPS6KL1Q9Y6S9 549 aa8.54□□□□□ -1.04
VRK1-206ENST00000557222 C1orf232A0A0U1RR37 186 aa8.53□□□□□ -1.04
VRK1-206ENST00000557222 PRR19A6NJB7 356 aa8.53□□□□□ -1.04
VRK1-206ENST00000557222 MYO1FO00160 1098 aa8.53□□□□□ -1.04
VRK1-206ENST00000557222 EREGO14944 169 aa8.53□□□□□ -1.04
VRK1-206ENST00000557222 CHUKO15111 745 aa8.53□□□□□ -1.04
VRK1-206ENST00000557222 KCNJ13O60928 360 aa8.53□□□□□ -1.04
VRK1-206ENST00000557222 ATP1A1P05023 1023 aaKnown RBP8.53□□□□□ -1.04
VRK1-206ENST00000557222 CYP1A2P05177 515 aa8.53□□□□□ -1.04
VRK1-206ENST00000557222 PRKAR1AP10644 381 aa8.53□□□□□ -1.04
VRK1-206ENST00000557222 FGF5P12034 268 aa8.53□□□□□ -1.04
VRK1-206ENST00000557222 ACP5P13686 325 aa8.53□□□□□ -1.04
VRK1-206ENST00000557222 TCF4P15884 667 aa8.53□□□□□ -1.04
VRK1-206ENST00000557222 DSC2Q02487 901 aa8.53□□□□□ -1.04
VRK1-206ENST00000557222 IHHQ14623 411 aa8.53□□□□□ -1.04
VRK1-206ENST00000557222 IGFBP7Q16270 282 aa8.53□□□□□ -1.04
VRK1-206ENST00000557222 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.53□□□□□ -1.04
VRK1-206ENST00000557222 AGAP9Q5VTM2 703 aa8.53□□□□□ -1.04
VRK1-206ENST00000557222 ABRAXAS1Q6UWZ7 409 aa8.53□□□□□ -1.04
VRK1-206ENST00000557222 TMEM26Q6ZUK4 368 aa8.53□□□□□ -1.04
VRK1-206ENST00000557222 PRSS42Q7Z5A4 293 aa8.53□□□□□ -1.04
VRK1-206ENST00000557222 CCDC13Q8IYE1 715 aa8.53□□□□□ -1.04
VRK1-206ENST00000557222 KLHL6Q8WZ60 621 aa8.53□□□□□ -1.04
VRK1-206ENST00000557222 ZDHHC12Q96GR4 267 aa8.53□□□□□ -1.04
VRK1-206ENST00000557222 PLEKHG4BQ96PX9 1271 aa8.53□□□□□ -1.04
VRK1-206ENST00000557222 PSMG3-AS1Q96PY0 264 aa8.53□□□□□ -1.04
VRK1-206ENST00000557222 ZNF670Q9BS34 389 aa8.53□□□□□ -1.04
VRK1-206ENST00000557222 TIMM29Q9BSF4 260 aa8.53□□□□□ -1.04
VRK1-206ENST00000557222 ZSCAN5AQ9BUG6 496 aa8.53□□□□□ -1.04
VRK1-206ENST00000557222 RAB33BQ9H082 229 aa8.53□□□□□ -1.04
VRK1-206ENST00000557222 APMAPQ9HDC9 416 aa8.53□□□□□ -1.04
VRK1-206ENST00000557222 ZNF71Q9NQZ8 489 aaPredicted RBP8.53□□□□□ -1.04
VRK1-206ENST00000557222 SEMA5BQ9P283 1151 aa8.53□□□□□ -1.04
VRK1-206ENST00000557222 POLHQ9Y253 713 aa8.53□□□□□ -1.04
VRK1-206ENST00000557222 KCNK6Q9Y257 313 aa8.53□□□□□ -1.04
VRK1-206ENST00000557222 MAN2B2Q9Y2E5 1009 aa8.53□□□□□ -1.04
VRK1-206ENST00000557222 PCYT1BQ9Y5K3 369 aaPredicted RBP8.53□□□□□ -1.04
VRK1-206ENST00000557222 ICE1Q9Y2F5 2266 aa8.53□□□□□ -1.04
VRK1-206ENST00000557222 ITPR2Q14571 2701 aa8.53□□□□□ -1.04
VRK1-206ENST00000557222 SPENQ96T58 3664 aaKnown RBP8.52□□□□□ -1.04
VRK1-206ENST00000557222 CREBBPQ92793 2442 aa8.52□□□□□ -1.05
VRK1-206ENST00000557222 A0A0U1RQS6 177 aa8.52□□□□□ -1.05
VRK1-206ENST00000557222 A0A1W2PQJ5 194 aa8.52□□□□□ -1.05
VRK1-206ENST00000557222 FADS2P1A8MWK0 482 aa8.52□□□□□ -1.05
VRK1-206ENST00000557222 C21orf140B9A014 251 aa8.52□□□□□ -1.05
VRK1-206ENST00000557222 KMOO15229 486 aa8.52□□□□□ -1.05
VRK1-206ENST00000557222 VEGFDO43915 354 aa8.52□□□□□ -1.05
VRK1-206ENST00000557222 MFSD11O43934 449 aa8.52□□□□□ -1.05
VRK1-206ENST00000557222 RFPL1O75677 317 aa8.52□□□□□ -1.05
VRK1-206ENST00000557222 MTA2O94776 668 aa8.52□□□□□ -1.05
VRK1-206ENST00000557222 UBXN7O94888 489 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms