RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 BRAPQ7Z569 592 aa4.71□□□□□ -1.66
SCFD1-223ENST00000557076 ARHGAP22Q7Z5H3 698 aa4.71□□□□□ -1.66
SCFD1-223ENST00000557076 SETD3Q86TU7 594 aaPredicted RBP4.71□□□□□ -1.66
SCFD1-223ENST00000557076 TTC7BQ86TV6 843 aa4.71□□□□□ -1.66
SCFD1-223ENST00000557076 CHSY1Q86X52 802 aa4.71□□□□□ -1.66
SCFD1-223ENST00000557076 NRSN1Q8IZ57 195 aa4.71□□□□□ -1.66
SCFD1-223ENST00000557076 MMP21Q8N119 569 aa4.71□□□□□ -1.66
SCFD1-223ENST00000557076 PCDH20Q8N6Y1 951 aaKnown RBP4.71□□□□□ -1.66
SCFD1-223ENST00000557076 CELF2-AS1Q8N7Q2 184 aa4.71□□□□□ -1.66
SCFD1-223ENST00000557076 ATP6V0D2Q8N8Y2 350 aa4.71□□□□□ -1.66
SCFD1-223ENST00000557076 UBA3Q8TBC4 463 aa4.71□□□□□ -1.66
SCFD1-223ENST00000557076 KIAA1524Q8TCG1 905 aa4.71□□□□□ -1.66
SCFD1-223ENST00000557076 DQX1Q8TE96 717 aaKnown RBP4.71□□□□□ -1.66
SCFD1-223ENST00000557076 THAP4Q8WY91 577 aa4.71□□□□□ -1.66
SCFD1-223ENST00000557076 PNPLA2Q96AD5 504 aa4.71□□□□□ -1.66
SCFD1-223ENST00000557076 ISG20Q96AZ6 181 aaKnown RBP4.71□□□□□ -1.66
SCFD1-223ENST00000557076 ZNF669Q96BR6 464 aaPredicted RBP4.71□□□□□ -1.66
SCFD1-223ENST00000557076 SNRNP40Q96DI7 357 aaKnown RBP4.71□□□□□ -1.66
SCFD1-223ENST00000557076 C19orf60Q96EN9 201 aa4.71□□□□□ -1.66
SCFD1-223ENST00000557076 PSMB7Q99436 277 aa4.71□□□□□ -1.66
SCFD1-223ENST00000557076 C7orf25Q9BPX7 421 aa4.71□□□□□ -1.66
SCFD1-223ENST00000557076 APOOQ9BUR5 198 aa4.71□□□□□ -1.66
SCFD1-223ENST00000557076 SLC25A23Q9BV35 468 aa4.71□□□□□ -1.66
SCFD1-223ENST00000557076 TRIM62Q9BVG3 475 aa4.71□□□□□ -1.66
SCFD1-223ENST00000557076 TNMDQ9H2S6 317 aa4.71□□□□□ -1.66
SCFD1-223ENST00000557076 NELFAQ9H3P2 528 aa4.71□□□□□ -1.66
SCFD1-223ENST00000557076 CUEDC2Q9H467 287 aa4.71□□□□□ -1.66
SCFD1-223ENST00000557076 DPEP2Q9H4A9 486 aa4.71□□□□□ -1.66
SCFD1-223ENST00000557076 GALNT8Q9NY28 637 aa4.71□□□□□ -1.66
SCFD1-223ENST00000557076 KCND3Q9UK17 655 aa4.71□□□□□ -1.66
SCFD1-223ENST00000557076 FBXO2Q9UK22 296 aaPredicted RBP4.71□□□□□ -1.66
SCFD1-223ENST00000557076 ITGB1BP2Q9UKP3 347 aa4.71□□□□□ -1.66
SCFD1-223ENST00000557076 TSPAN16Q9UKR8 245 aa4.71□□□□□ -1.66
SCFD1-223ENST00000557076 ATP23Q9Y6H3 246 aa4.71□□□□□ -1.66
SCFD1-223ENST00000557076 MORC2Q9Y6X9 1032 aaPredicted RBP4.71□□□□□ -1.66
SCFD1-223ENST00000557076 ACANP16112 2415 aa4.71□□□□□ -1.66
SCFD1-223ENST00000557076 CSPG4Q6UVK1 2322 aa4.71□□□□□ -1.66
SCFD1-223ENST00000557076 CNTRLQ7Z7A1 2325 aa4.71□□□□□ -1.66
SCFD1-223ENST00000557076 IGHV1OR21-1A0A087WYE8 117 aa4.7□□□□□ -1.66
SCFD1-223ENST00000557076 A0A087X1B8 175 aa4.7□□□□□ -1.66
SCFD1-223ENST00000557076 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.7□□□□□ -1.66
SCFD1-223ENST00000557076 PVALEFA0A1B0GWK0 134 aa4.7□□□□□ -1.66
SCFD1-223ENST00000557076 ZSCAN5CA6NGD5 496 aaPredicted RBP4.7□□□□□ -1.66
SCFD1-223ENST00000557076 FAM90A27PA6NNH2 459 aa4.7□□□□□ -1.66
SCFD1-223ENST00000557076 H3BQV1 296 aa4.7□□□□□ -1.66
SCFD1-223ENST00000557076 O00370 1275 aa4.7□□□□□ -1.66
SCFD1-223ENST00000557076 PDXKO00764 312 aa4.7□□□□□ -1.66
SCFD1-223ENST00000557076 SNAP91O60641 907 aa4.7□□□□□ -1.66
SCFD1-223ENST00000557076 DIAPH2O60879 1101 aa4.7□□□□□ -1.66
SCFD1-223ENST00000557076 POP4O95707 220 aaKnown RBP4.7□□□□□ -1.66
SCFD1-223ENST00000557076 TRUB2O95900 331 aaKnown RBP4.7□□□□□ -1.66
SCFD1-223ENST00000557076 IGLV3-25P01717 112 aa4.7□□□□□ -1.66
SCFD1-223ENST00000557076 VDRP11473 427 aa4.7□□□□□ -1.66
SCFD1-223ENST00000557076 NAT1P18440 290 aa4.7□□□□□ -1.66
SCFD1-223ENST00000557076 CCR1P32246 355 aa4.7□□□□□ -1.66
SCFD1-223ENST00000557076 DLSTP36957 453 aa4.7□□□□□ -1.66
SCFD1-223ENST00000557076 STAT1P42224 750 aa4.7□□□□□ -1.66
SCFD1-223ENST00000557076 GCLMP48507 274 aa4.7□□□□□ -1.66
SCFD1-223ENST00000557076 RPL34P49207 117 aaKnown RBP4.7□□□□□ -1.66
SCFD1-223ENST00000557076 NUMBP49757 651 aa4.7□□□□□ -1.66
SCFD1-223ENST00000557076 SUOXP51687 545 aa4.7□□□□□ -1.66
SCFD1-223ENST00000557076 NDST2P52849 883 aa4.7□□□□□ -1.66
SCFD1-223ENST00000557076 CDH4P55283 916 aa4.7□□□□□ -1.66
SCFD1-223ENST00000557076 HDAC4P56524 1084 aa4.7□□□□□ -1.66
SCFD1-223ENST00000557076 PER3P56645 1201 aa4.7□□□□□ -1.66
SCFD1-223ENST00000557076 IL13RA1P78552 427 aa4.7□□□□□ -1.66
SCFD1-223ENST00000557076 HHEXQ03014 270 aa4.7□□□□□ -1.66
SCFD1-223ENST00000557076 ART3Q13508 389 aa4.7□□□□□ -1.66
SCFD1-223ENST00000557076 RAPGEF1Q13905 1077 aa4.7□□□□□ -1.66
SCFD1-223ENST00000557076 STILQ15468 1287 aa4.7□□□□□ -1.66
SCFD1-223ENST00000557076 CNGA2Q16280 664 aa4.7□□□□□ -1.66
SCFD1-223ENST00000557076 KLHL40Q2TBA0 621 aa4.7□□□□□ -1.66
SCFD1-223ENST00000557076 WSCD2Q2TBF2 565 aa4.7□□□□□ -1.66
SCFD1-223ENST00000557076 SYPL2Q5VXT5 272 aa4.7□□□□□ -1.66
SCFD1-223ENST00000557076 SPECC1LQ69YQ0 1117 aa4.7□□□□□ -1.66
SCFD1-223ENST00000557076 RETSATQ6NUM9 610 aa4.7□□□□□ -1.66
SCFD1-223ENST00000557076 C22orf39Q6P5X5 142 aa4.7□□□□□ -1.66
SCFD1-223ENST00000557076 WDR74Q6RFH5 385 aaPredicted RBP4.7□□□□□ -1.66
SCFD1-223ENST00000557076 PARS2Q7L3T8 475 aaKnown RBP4.7□□□□□ -1.66
SCFD1-223ENST00000557076 GDF7Q7Z4P5 450 aa4.7□□□□□ -1.66
SCFD1-223ENST00000557076 SFTPA2Q8IWL1 248 aa4.7□□□□□ -1.66
SCFD1-223ENST00000557076 FAM186BQ8IYM0 893 aa4.7□□□□□ -1.66
SCFD1-223ENST00000557076 ZNF808Q8N4W9 903 aaPredicted RBP4.7□□□□□ -1.66
SCFD1-223ENST00000557076 DCAF4L2Q8NA75 395 aa4.7□□□□□ -1.66
SCFD1-223ENST00000557076 CLEC4CQ8WTT0 213 aa4.7□□□□□ -1.66
SCFD1-223ENST00000557076 NEU4Q8WWR8 484 aaPredicted RBP4.7□□□□□ -1.66
SCFD1-223ENST00000557076 WDR92Q96MX6 357 aa4.7□□□□□ -1.66
SCFD1-223ENST00000557076 RPRD1AQ96P16 312 aaPredicted RBP4.7□□□□□ -1.66
SCFD1-223ENST00000557076 RANBP9Q96S59 729 aa4.7□□□□□ -1.66
SCFD1-223ENST00000557076 TWSG1Q9GZX9 223 aa4.7□□□□□ -1.66
SCFD1-223ENST00000557076 PIF1Q9H611 641 aa4.7□□□□□ -1.66
SCFD1-223ENST00000557076 ZNF703Q9H7S9 590 aaPredicted RBP4.7□□□□□ -1.66
SCFD1-223ENST00000557076 CHST11Q9NPF2 352 aa4.7□□□□□ -1.66
SCFD1-223ENST00000557076 SPATS2LQ9NUQ6 558 aaKnown RBP4.7□□□□□ -1.66
SCFD1-223ENST00000557076 HECAQ9UBI9 543 aaPredicted RBP4.7□□□□□ -1.66
SCFD1-223ENST00000557076 KLQ9UEF7 1012 aa4.7□□□□□ -1.66
SCFD1-223ENST00000557076 VPS51Q9UID3 782 aa4.7□□□□□ -1.66
SCFD1-223ENST00000557076 PADI1Q9ULC6 663 aa4.7□□□□□ -1.66
SCFD1-223ENST00000557076 FRMD4BQ9Y2L6 1034 aa4.7□□□□□ -1.66
SCFD1-223ENST00000557076 KLF2Q9Y5W3 355 aaPredicted RBP4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms