RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 ENTPD2Q9Y5L3 495 aa10.5□□□□□ -0.73
LINC00239-201ENST00000556973 RP1P56715 2156 aa10.49□□□□□ -0.73
LINC00239-201ENST00000556973 OR51F1A6NGY5 319 aa10.49□□□□□ -0.73
LINC00239-201ENST00000556973 F8W8V4 182 aa10.49□□□□□ -0.73
LINC00239-201ENST00000556973 QSOX1O00391 747 aa10.49□□□□□ -0.73
LINC00239-201ENST00000556973 DNALI1O14645 258 aaPredicted RBP10.49□□□□□ -0.73
LINC00239-201ENST00000556973 CASC3O15234 703 aaKnown RBP10.49□□□□□ -0.73
LINC00239-201ENST00000556973 AVILO75366 819 aa10.49□□□□□ -0.73
LINC00239-201ENST00000556973 TMEM63AO94886 807 aa10.49□□□□□ -0.73
LINC00239-201ENST00000556973 CPNE6O95741 557 aa10.49□□□□□ -0.73
LINC00239-201ENST00000556973 VIPP01282 170 aa10.49□□□□□ -0.73
LINC00239-201ENST00000556973 PRSS56P0CW18 603 aa10.49□□□□□ -0.73
LINC00239-201ENST00000556973 BRAFP15056 766 aa10.49□□□□□ -0.73
LINC00239-201ENST00000556973 NMBRP28336 390 aa10.49□□□□□ -0.73
LINC00239-201ENST00000556973 CD1CP29017 333 aa10.49□□□□□ -0.73
LINC00239-201ENST00000556973 PRLHRP49683 370 aa10.49□□□□□ -0.73
LINC00239-201ENST00000556973 GPLD1P80108 840 aa10.49□□□□□ -0.73
LINC00239-201ENST00000556973 DR1Q01658 176 aa10.49□□□□□ -0.73
LINC00239-201ENST00000556973 DHX34Q14147 1143 aaKnown RBP10.49□□□□□ -0.73
LINC00239-201ENST00000556973 NFE2L1Q14494 772 aa10.49□□□□□ -0.73
LINC00239-201ENST00000556973 RTP5Q14D33 572 aa10.49□□□□□ -0.73
LINC00239-201ENST00000556973 SEPT7Q16181 437 aaKnown RBP10.49□□□□□ -0.73
LINC00239-201ENST00000556973 DBN1Q16643 649 aa10.49□□□□□ -0.73
LINC00239-201ENST00000556973 RNASEH2BQ5TBB1 312 aaKnown RBP10.49□□□□□ -0.73
LINC00239-201ENST00000556973 PACS1Q6VY07 963 aa10.49□□□□□ -0.73
LINC00239-201ENST00000556973 RBM12BQ8IXT5 1001 aaKnown RBP10.49□□□□□ -0.73
LINC00239-201ENST00000556973 CFAP206Q8IYR0 622 aa10.49□□□□□ -0.73
LINC00239-201ENST00000556973 TMEM74Q96NL1 305 aa10.49□□□□□ -0.73
LINC00239-201ENST00000556973 DPYSL5Q9BPU6 564 aa10.49□□□□□ -0.73
LINC00239-201ENST00000556973 CCM2Q9BSQ5 444 aa10.49□□□□□ -0.73
LINC00239-201ENST00000556973 SYNDIG1Q9H7V2 258 aa10.49□□□□□ -0.73
LINC00239-201ENST00000556973 UCK1Q9HA47 277 aa10.49□□□□□ -0.73
LINC00239-201ENST00000556973 CATSPERZQ9NTU4 200 aa10.49□□□□□ -0.73
LINC00239-201ENST00000556973 POT1Q9NUX5 634 aa10.49□□□□□ -0.73
LINC00239-201ENST00000556973 SYBUQ9NX95 663 aa10.49□□□□□ -0.73
LINC00239-201ENST00000556973 KCNK4Q9NYG8 393 aa10.49□□□□□ -0.73
LINC00239-201ENST00000556973 SCHIP1Q9P0W5 487 aaPredicted RBP10.49□□□□□ -0.73
LINC00239-201ENST00000556973 SAMD15Q9P1V8 674 aa10.49□□□□□ -0.73
LINC00239-201ENST00000556973 ZNF624Q9P2J8 865 aaPredicted RBP10.49□□□□□ -0.73
LINC00239-201ENST00000556973 ASIC3Q9UHC3 531 aa10.49□□□□□ -0.73
LINC00239-201ENST00000556973 WDR37Q9Y2I8 494 aa10.49□□□□□ -0.73
LINC00239-201ENST00000556973 ASXL3Q9C0F0 2248 aa10.49□□□□□ -0.73
LINC00239-201ENST00000556973 IGHV1OR21-1A0A087WYE8 117 aa10.48□□□□□ -0.73
LINC00239-201ENST00000556973 FAM237BA0A1B0GVD1 139 aa10.48□□□□□ -0.73
LINC00239-201ENST00000556973 D6RAR5 112 aa10.48□□□□□ -0.73
LINC00239-201ENST00000556973 GOLGA8MH3BSY2 632 aa10.48□□□□□ -0.73
LINC00239-201ENST00000556973 CD3EAPO15446 510 aaKnown RBP10.48□□□□□ -0.73
LINC00239-201ENST00000556973 VAPBO95292 243 aa10.48□□□□□ -0.73
LINC00239-201ENST00000556973 TUBB4AP04350 444 aa10.48□□□□□ -0.73
LINC00239-201ENST00000556973 CAPNS1P04632 268 aa10.48□□□□□ -0.73
LINC00239-201ENST00000556973 PAMP19021 973 aa10.48□□□□□ -0.73
LINC00239-201ENST00000556973 IVDP26440 423 aa10.48□□□□□ -0.73
LINC00239-201ENST00000556973 PBLDP30039 288 aaPredicted RBP10.48□□□□□ -0.73
LINC00239-201ENST00000556973 SLC19A1P41440 591 aa10.48□□□□□ -0.73
LINC00239-201ENST00000556973 TTPAP49638 278 aa10.48□□□□□ -0.73
LINC00239-201ENST00000556973 EPHA4P54764 986 aa10.48□□□□□ -0.73
LINC00239-201ENST00000556973 DRG2P55039 364 aaKnown RBP10.48□□□□□ -0.73
LINC00239-201ENST00000556973 INHBCP55103 352 aa10.48□□□□□ -0.73
LINC00239-201ENST00000556973 UBE2IP63279 158 aaKnown RBP10.48□□□□□ -0.73
LINC00239-201ENST00000556973 ZFP36L1Q07352 338 aaKnown RBP10.48□□□□□ -0.73
LINC00239-201ENST00000556973 CLCA4Q14CN2 919 aa10.48□□□□□ -0.73
LINC00239-201ENST00000556973 AMZ1Q400G9 498 aa10.48□□□□□ -0.73
LINC00239-201ENST00000556973 AARS2Q5JTZ9 985 aaKnown RBP10.48□□□□□ -0.73
LINC00239-201ENST00000556973 CASC4Q6P4E1 433 aa10.48□□□□□ -0.73
LINC00239-201ENST00000556973 ZNF449Q6P9G9 518 aa10.48□□□□□ -0.73
LINC00239-201ENST00000556973 FAM83HQ6ZRV2 1179 aaPredicted RBP10.48□□□□□ -0.73
LINC00239-201ENST00000556973 USP53Q70EK8 1073 aa10.48□□□□□ -0.73
LINC00239-201ENST00000556973 HOOK3Q86VS8 718 aa10.48□□□□□ -0.73
LINC00239-201ENST00000556973 TRIM48Q8IWZ4 208 aa10.48□□□□□ -0.73
LINC00239-201ENST00000556973 MPP5Q8N3R9 675 aa10.48□□□□□ -0.73
LINC00239-201ENST00000556973 CLDN19Q8N6F1 224 aa10.48□□□□□ -0.73
LINC00239-201ENST00000556973 KDF1Q8NAX2 398 aaPredicted RBP10.48□□□□□ -0.73
LINC00239-201ENST00000556973 OR10G6Q8NH81 332 aa10.48□□□□□ -0.73
LINC00239-201ENST00000556973 CXorf40BQ96DE9 158 aa10.48□□□□□ -0.73
LINC00239-201ENST00000556973 MFSD3Q96ES6 412 aa10.48□□□□□ -0.73
LINC00239-201ENST00000556973 AHCYL2Q96HN2 611 aaKnown RBP10.48□□□□□ -0.73
LINC00239-201ENST00000556973 SERPINB12Q96P63 405 aa10.48□□□□□ -0.73
LINC00239-201ENST00000556973 STRADBQ9C0K7 418 aa10.48□□□□□ -0.73
LINC00239-201ENST00000556973 EPB41L1Q9H4G0 881 aa10.48□□□□□ -0.73
LINC00239-201ENST00000556973 CCDC86Q9H6F5 360 aaKnown RBP10.48□□□□□ -0.73
LINC00239-201ENST00000556973 SLC40A1Q9NP59 571 aa10.48□□□□□ -0.73
LINC00239-201ENST00000556973 DKK4Q9UBT3 224 aa10.48□□□□□ -0.73
LINC00239-201ENST00000556973 ATXN7L1Q9ULK2 861 aaPredicted RBP10.48□□□□□ -0.73
LINC00239-201ENST00000556973 PCDHB1Q9Y5F3 818 aa10.48□□□□□ -0.73
LINC00239-201ENST00000556973 AK5Q9Y6K8 562 aa10.48□□□□□ -0.73
LINC00239-201ENST00000556973 OR52A4PA6NMU1 304 aa10.47□□□□□ -0.73
LINC00239-201ENST00000556973 SMAPO00193 183 aa10.47□□□□□ -0.73
LINC00239-201ENST00000556973 FTH1P02794 183 aa10.47□□□□□ -0.73
LINC00239-201ENST00000556973 OR56A5P0C7T3 313 aa10.47□□□□□ -0.73
LINC00239-201ENST00000556973 CCKBRP32239 447 aa10.47□□□□□ -0.73
LINC00239-201ENST00000556973 MAGEA3P43357 314 aa10.47□□□□□ -0.73
LINC00239-201ENST00000556973 LSSP48449 732 aa10.47□□□□□ -0.73
LINC00239-201ENST00000556973 PDX1P52945 283 aa10.47□□□□□ -0.73
LINC00239-201ENST00000556973 CYP4F3Q08477 520 aa10.47□□□□□ -0.73
LINC00239-201ENST00000556973 RPA4Q13156 261 aa10.47□□□□□ -0.73
LINC00239-201ENST00000556973 SEMA3AQ14563 771 aa10.47□□□□□ -0.73
LINC00239-201ENST00000556973 RPE65Q16518 533 aa10.47□□□□□ -0.73
LINC00239-201ENST00000556973 MAP9Q49MG5 647 aa10.47□□□□□ -0.73
LINC00239-201ENST00000556973 NKAIN2Q5VXU1 208 aa10.47□□□□□ -0.73
LINC00239-201ENST00000556973 IZUMO3Q5VZ72 239 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms