RNA–Protein interactions for RNA: ENST00000556533.5

PSEN1-217, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-217ENST00000556533 CNTNAP3Q9BZ76 1288 aa16.78■□□□□ 0.28
PSEN1-217ENST00000556533 STN1Q9H668 368 aaKnown RBP16.78■□□□□ 0.28
PSEN1-217ENST00000556533 TREX1Q9NSU2 369 aa16.78■□□□□ 0.28
PSEN1-217ENST00000556533 SOX13Q9UN79 622 aa16.78■□□□□ 0.28
PSEN1-217ENST00000556533 WDR37Q9Y2I8 494 aa16.78■□□□□ 0.28
PSEN1-217ENST00000556533 PCDHB1Q9Y5F3 818 aa16.78■□□□□ 0.28
PSEN1-217ENST00000556533 PRSS21Q9Y6M0 314 aa16.78■□□□□ 0.28
PSEN1-217ENST00000556533 SCN8AQ9UQD0 1980 aa16.77■□□□□ 0.28
PSEN1-217ENST00000556533 IGLV3-16A0A075B6K0 115 aa16.77■□□□□ 0.28
PSEN1-217ENST00000556533 OR52A4PA6NMU1 304 aa16.77■□□□□ 0.28
PSEN1-217ENST00000556533 AGRPO00253 132 aa16.77■□□□□ 0.28
PSEN1-217ENST00000556533 NTN3O00634 580 aaPredicted RBP16.77■□□□□ 0.28
PSEN1-217ENST00000556533 OR1I1O60431 355 aa16.77■□□□□ 0.28
PSEN1-217ENST00000556533 URI1O94763 535 aaPredicted RBP16.77■□□□□ 0.28
PSEN1-217ENST00000556533 VIPP01282 170 aa16.77■□□□□ 0.28
PSEN1-217ENST00000556533 BRAFP15056 766 aa16.77■□□□□ 0.28
PSEN1-217ENST00000556533 C2orf54Q08AI8 447 aa16.77■□□□□ 0.28
PSEN1-217ENST00000556533 SEMA3AQ14563 771 aa16.77■□□□□ 0.28
PSEN1-217ENST00000556533 CLCA4Q14CN2 919 aa16.77■□□□□ 0.28
PSEN1-217ENST00000556533 ISXQ2M1V0 245 aa16.77■□□□□ 0.28
PSEN1-217ENST00000556533 AGAP9Q5VTM2 703 aa16.77■□□□□ 0.28
PSEN1-217ENST00000556533 UNQ6494/PRO21346Q6UXR6 183 aa16.77■□□□□ 0.28
PSEN1-217ENST00000556533 CERS6Q6ZMG9 384 aa16.77■□□□□ 0.28
PSEN1-217ENST00000556533 ZNF438Q7Z4V0 828 aa16.77■□□□□ 0.28
PSEN1-217ENST00000556533 SPATA4Q8NEY3 305 aa16.77■□□□□ 0.28
PSEN1-217ENST00000556533 PEX13Q92968 403 aa16.77■□□□□ 0.28
PSEN1-217ENST00000556533 SH3KBP1Q96B97 665 aa16.77■□□□□ 0.28
PSEN1-217ENST00000556533 ATXN7L3BQ96GX2 97 aa16.77■□□□□ 0.28
PSEN1-217ENST00000556533 AHCYL2Q96HN2 611 aaKnown RBP16.77■□□□□ 0.28
PSEN1-217ENST00000556533 TRIM56Q9BRZ2 755 aaKnown RBP16.77■□□□□ 0.28
PSEN1-217ENST00000556533 FOXP3Q9BZS1 431 aa16.77■□□□□ 0.28
PSEN1-217ENST00000556533 ZMYND15Q9H091 742 aa16.77■□□□□ 0.28
PSEN1-217ENST00000556533 WWP1Q9H0M0 922 aa16.77■□□□□ 0.28
PSEN1-217ENST00000556533 RDH14Q9HBH5 336 aa16.77■□□□□ 0.28
PSEN1-217ENST00000556533 MRM3Q9HC36 420 aaKnown RBP16.77■□□□□ 0.28
PSEN1-217ENST00000556533 SARS2Q9NP81 518 aaKnown RBP16.77■□□□□ 0.28
PSEN1-217ENST00000556533 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.77■□□□□ 0.28
PSEN1-217ENST00000556533 MARCH4Q9P2E8 410 aaPredicted RBP16.77■□□□□ 0.28
PSEN1-217ENST00000556533 ZNF624Q9P2J8 865 aaPredicted RBP16.77■□□□□ 0.28
PSEN1-217ENST00000556533 PRAMEF33A0A0G2JMD5 474 aa16.76■□□□□ 0.27
PSEN1-217ENST00000556533 MAGEB16A2A368 324 aa16.76■□□□□ 0.27
PSEN1-217ENST00000556533 PRR19A6NJB7 356 aa16.76■□□□□ 0.27
PSEN1-217ENST00000556533 GOLGA8KD6RF30 607 aa16.76■□□□□ 0.27
PSEN1-217ENST00000556533 GOLGA8TH3BQL2 631 aa16.76■□□□□ 0.27
PSEN1-217ENST00000556533 TCEA3O75764 348 aa16.76■□□□□ 0.27
PSEN1-217ENST00000556533 AP2A2O94973 939 aa16.76■□□□□ 0.27
PSEN1-217ENST00000556533 XRCC1P18887 633 aaPredicted RBP16.76■□□□□ 0.27
PSEN1-217ENST00000556533 CD1CP29017 333 aa16.76■□□□□ 0.27
PSEN1-217ENST00000556533 PPARGP37231 505 aaPredicted RBP16.76■□□□□ 0.27
PSEN1-217ENST00000556533 SLC19A1P41440 591 aa16.76■□□□□ 0.27
PSEN1-217ENST00000556533 NSG1P42857 185 aa16.76■□□□□ 0.27
PSEN1-217ENST00000556533 GPR3P46089 330 aa16.76■□□□□ 0.27
PSEN1-217ENST00000556533 FASLGP48023 281 aa16.76■□□□□ 0.27
PSEN1-217ENST00000556533 PRLHRP49683 370 aa16.76■□□□□ 0.27
PSEN1-217ENST00000556533 DMPKQ09013 629 aa16.76■□□□□ 0.27
PSEN1-217ENST00000556533 DHX34Q14147 1143 aaKnown RBP16.76■□□□□ 0.27
PSEN1-217ENST00000556533 ITIH4Q14624 930 aa16.76■□□□□ 0.27
PSEN1-217ENST00000556533 MAP9Q49MG5 647 aa16.76■□□□□ 0.27
PSEN1-217ENST00000556533 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.76■□□□□ 0.27
PSEN1-217ENST00000556533 METRNLQ641Q3 311 aa16.76■□□□□ 0.27
PSEN1-217ENST00000556533 FOXR1Q6PIV2 292 aa16.76■□□□□ 0.27
PSEN1-217ENST00000556533 ABRAXAS1Q6UWZ7 409 aa16.76■□□□□ 0.27
PSEN1-217ENST00000556533 WASH2PQ6VEQ5 465 aa16.76■□□□□ 0.27
PSEN1-217ENST00000556533 CACTIN-AS1Q8N1I8 211 aa16.76■□□□□ 0.27
PSEN1-217ENST00000556533 LILRA3Q8N6C8 439 aaPredicted RBP16.76■□□□□ 0.27
PSEN1-217ENST00000556533 GATA6Q92908 595 aa16.76■□□□□ 0.27
PSEN1-217ENST00000556533 ZNF669Q96BR6 464 aaPredicted RBP16.76■□□□□ 0.27
PSEN1-217ENST00000556533 VPS37BQ9H9H4 285 aa16.76■□□□□ 0.27
PSEN1-217ENST00000556533 WASH6PQ9NQA3 447 aa16.76■□□□□ 0.27
PSEN1-217ENST00000556533 AK5Q9Y6K8 562 aa16.76■□□□□ 0.27
PSEN1-217ENST00000556533 IGHV1OR21-1A0A087WYE8 117 aa16.75■□□□□ 0.27
PSEN1-217ENST00000556533 EFCAB8A8MWE9 144 aa16.75■□□□□ 0.27
PSEN1-217ENST00000556533 D6RAR5 112 aa16.75■□□□□ 0.27
PSEN1-217ENST00000556533 NDUFS3O75489 264 aa16.75■□□□□ 0.27
PSEN1-217ENST00000556533 ITGB6P18564 788 aa16.75■□□□□ 0.27
PSEN1-217ENST00000556533 PAMP19021 973 aa16.75■□□□□ 0.27
PSEN1-217ENST00000556533 IVDP26440 423 aa16.75■□□□□ 0.27
PSEN1-217ENST00000556533 UBE2IP63279 158 aaKnown RBP16.75■□□□□ 0.27
PSEN1-217ENST00000556533 CAMK2BQ13554 666 aa16.75■□□□□ 0.27
PSEN1-217ENST00000556533 BRD3Q15059 726 aa16.75■□□□□ 0.27
PSEN1-217ENST00000556533 RPE65Q16518 533 aa16.75■□□□□ 0.27
PSEN1-217ENST00000556533 ANKRD20A4Q4UJ75 823 aa16.75■□□□□ 0.27
PSEN1-217ENST00000556533 AARS2Q5JTZ9 985 aaKnown RBP16.75■□□□□ 0.27
PSEN1-217ENST00000556533 B3GNT8Q7Z7M8 397 aa16.75■□□□□ 0.27
PSEN1-217ENST00000556533 SDCCAG8Q86SQ7 713 aaPredicted RBP16.75■□□□□ 0.27
PSEN1-217ENST00000556533 PIM3Q86V86 326 aa16.75■□□□□ 0.27
PSEN1-217ENST00000556533 AVL9Q8NBF6 648 aa16.75■□□□□ 0.27
PSEN1-217ENST00000556533 OR10G6Q8NH81 332 aa16.75■□□□□ 0.27
PSEN1-217ENST00000556533 STAMBPL1Q96FJ0 436 aa16.75■□□□□ 0.27
PSEN1-217ENST00000556533 LINC00615Q96LM1 132 aaPredicted RBP16.75■□□□□ 0.27
PSEN1-217ENST00000556533 FCRL3Q96P31 734 aaPredicted RBP16.75■□□□□ 0.27
PSEN1-217ENST00000556533 TBC1D10AQ9BXI6 508 aa16.75■□□□□ 0.27
PSEN1-217ENST00000556533 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.75■□□□□ 0.27
PSEN1-217ENST00000556533 EPB41L5Q9HCM4 733 aa16.75■□□□□ 0.27
PSEN1-217ENST00000556533 IMP3Q9NV31 184 aaKnown RBP16.75■□□□□ 0.27
PSEN1-217ENST00000556533 ACSL5Q9ULC5 683 aa16.75■□□□□ 0.27
PSEN1-217ENST00000556533 SNX24Q9Y343 169 aa16.75■□□□□ 0.27
PSEN1-217ENST00000556533 CFAP20Q9Y6A4 193 aaKnown RBP16.75■□□□□ 0.27
PSEN1-217ENST00000556533 RPS6KL1Q9Y6S9 549 aa16.75■□□□□ 0.27
PSEN1-217ENST00000556533 FAM237BA0A1B0GVD1 139 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms