RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 OR10V1Q8NGI7 309 aa4.79□□□□□ -1.64
PRPF39-209ENST00000556353 OR5R1Q8NH85 324 aa4.79□□□□□ -1.64
PRPF39-209ENST00000556353 HVCN1Q96D96 273 aa4.79□□□□□ -1.64
PRPF39-209ENST00000556353 ST6GAL2Q96JF0 529 aa4.79□□□□□ -1.64
PRPF39-209ENST00000556353 EIF2AK1Q9BQI3 630 aaKnown RBP4.79□□□□□ -1.64
PRPF39-209ENST00000556353 ANP32EQ9BTT0 268 aa4.79□□□□□ -1.64
PRPF39-209ENST00000556353 C1QTNF5Q9BXJ0 243 aa4.79□□□□□ -1.64
PRPF39-209ENST00000556353 UPF2Q9HAU5 1272 aaKnown RBP4.79□□□□□ -1.64
PRPF39-209ENST00000556353 SLC6A13Q9NSD5 602 aa4.79□□□□□ -1.64
PRPF39-209ENST00000556353 MAP3K20Q9NYL2 800 aaKnown RBP4.79□□□□□ -1.64
PRPF39-209ENST00000556353 SBF1O95248 1867 aa4.79□□□□□ -1.64
PRPF39-209ENST00000556353 CCDC88AQ3V6T2 1871 aa4.79□□□□□ -1.64
PRPF39-209ENST00000556353 ARFGEF1Q9Y6D6 1849 aa4.79□□□□□ -1.64
PRPF39-209ENST00000556353 MAP3K5Q99683 1374 aa4.78□□□□□ -1.64
PRPF39-209ENST00000556353 CCDC196A0A1B0GTZ2 297 aa4.78□□□□□ -1.64
PRPF39-209ENST00000556353 A0A1W2PQM1 296 aa4.78□□□□□ -1.64
PRPF39-209ENST00000556353 ANTXRLA6NF34 631 aa4.78□□□□□ -1.64
PRPF39-209ENST00000556353 SNAP23O00161 211 aa4.78□□□□□ -1.64
PRPF39-209ENST00000556353 TUBBP07437 444 aa4.78□□□□□ -1.64
PRPF39-209ENST00000556353 FAM106CPP0CH98 169 aa4.78□□□□□ -1.64
PRPF39-209ENST00000556353 CPOXP36551 454 aa4.78□□□□□ -1.64
PRPF39-209ENST00000556353 KRTAP10-12P60413 245 aa4.78□□□□□ -1.64
PRPF39-209ENST00000556353 TUBB4BP68371 445 aa4.78□□□□□ -1.64
PRPF39-209ENST00000556353 FCN2Q15485 313 aa4.78□□□□□ -1.64
PRPF39-209ENST00000556353 ZNF876PQ49A33 203 aa4.78□□□□□ -1.64
PRPF39-209ENST00000556353 ZNF704Q6ZNC4 412 aaPredicted RBP4.78□□□□□ -1.64
PRPF39-209ENST00000556353 HMGCLL1Q8TB92 370 aa4.78□□□□□ -1.64
PRPF39-209ENST00000556353 THAP6Q8TBB0 222 aa4.78□□□□□ -1.64
PRPF39-209ENST00000556353 TAS1R2Q8TE23 839 aa4.78□□□□□ -1.64
PRPF39-209ENST00000556353 SLC38A5Q8WUX1 472 aa4.78□□□□□ -1.64
PRPF39-209ENST00000556353 RHBDF1Q96CC6 855 aa4.78□□□□□ -1.64
PRPF39-209ENST00000556353 PRKRIP1Q9H875 184 aaPredicted RBP4.78□□□□□ -1.64
PRPF39-209ENST00000556353 BRF2Q9HAW0 419 aa4.78□□□□□ -1.64
PRPF39-209ENST00000556353 SEBOXQ9HB31 216 aaPredicted RBP4.78□□□□□ -1.64
PRPF39-209ENST00000556353 ACSS1Q9NUB1 689 aaPredicted RBP4.78□□□□□ -1.64
PRPF39-209ENST00000556353 TERF2IPQ9NYB0 399 aa4.78□□□□□ -1.64
PRPF39-209ENST00000556353 POLG2Q9UHN1 485 aa4.78□□□□□ -1.64
PRPF39-209ENST00000556353 FBXL2Q9UKC9 423 aa4.78□□□□□ -1.64
PRPF39-209ENST00000556353 SMG6Q86US8 1419 aaKnown RBP4.78□□□□□ -1.64
PRPF39-209ENST00000556353 SNED1Q8TER0 1413 aa4.78□□□□□ -1.64
PRPF39-209ENST00000556353 DLEC1Q9Y238 1755 aa4.78□□□□□ -1.64
PRPF39-209ENST00000556353 CACNA1SQ13698 1873 aa4.77□□□□□ -1.65
PRPF39-209ENST00000556353 IGLV5-45A0A087WSX0 123 aa4.77□□□□□ -1.65
PRPF39-209ENST00000556353 HOXC11O43248 304 aaPredicted RBP4.77□□□□□ -1.65
PRPF39-209ENST00000556353 IGHV4-39P01824 125 aa4.77□□□□□ -1.65
PRPF39-209ENST00000556353 INHBAP08476 426 aa4.77□□□□□ -1.65
PRPF39-209ENST00000556353 CTCFP49711 727 aaPredicted RBP4.77□□□□□ -1.65
PRPF39-209ENST00000556353 GRIK2Q13002 908 aa4.77□□□□□ -1.65
PRPF39-209ENST00000556353 ALG11Q2TAA5 492 aa4.77□□□□□ -1.65
PRPF39-209ENST00000556353 DCST1Q5T197 706 aa4.77□□□□□ -1.65
PRPF39-209ENST00000556353 SLC27A1Q6PCB7 646 aa4.77□□□□□ -1.65
PRPF39-209ENST00000556353 CCDC13Q8IYE1 715 aa4.77□□□□□ -1.65
PRPF39-209ENST00000556353 ACVR1CQ8NER5 493 aa4.77□□□□□ -1.65
PRPF39-209ENST00000556353 TAAR8Q969N4 342 aa4.77□□□□□ -1.65
PRPF39-209ENST00000556353 ZNF524Q96C55 264 aa4.77□□□□□ -1.65
PRPF39-209ENST00000556353 RNF125Q96EQ8 232 aa4.77□□□□□ -1.65
PRPF39-209ENST00000556353 SAAL1Q96ER3 474 aa4.77□□□□□ -1.65
PRPF39-209ENST00000556353 LINGO1Q96FE5 620 aa4.77□□□□□ -1.65
PRPF39-209ENST00000556353 SCRN2Q96FV2 425 aa4.77□□□□□ -1.65
PRPF39-209ENST00000556353 ZNF354BQ96LW1 612 aa4.77□□□□□ -1.65
PRPF39-209ENST00000556353 LITAFQ99732 161 aa4.77□□□□□ -1.65
PRPF39-209ENST00000556353 PCGF1Q9BSM1 259 aa4.77□□□□□ -1.65
PRPF39-209ENST00000556353 GFRA4Q9GZZ7 299 aa4.77□□□□□ -1.65
PRPF39-209ENST00000556353 ASAH2Q9NR71 780 aa4.77□□□□□ -1.65
PRPF39-209ENST00000556353 PADI3Q9ULW8 664 aa4.77□□□□□ -1.65
PRPF39-209ENST00000556353 KLHL20Q9Y2M5 609 aa4.77□□□□□ -1.65
PRPF39-209ENST00000556353 INSRP06213 1382 aa4.77□□□□□ -1.65
PRPF39-209ENST00000556353 FLT4P35916 1363 aa4.77□□□□□ -1.65
PRPF39-209ENST00000556353 ZCWPW2A0A1B0GU75 182 aa4.76□□□□□ -1.65
PRPF39-209ENST00000556353 CTAGE9A4FU28 777 aa4.76□□□□□ -1.65
PRPF39-209ENST00000556353 HS3ST1O14792 307 aa4.76□□□□□ -1.65
PRPF39-209ENST00000556353 SYNGR3O43761 229 aa4.76□□□□□ -1.65
PRPF39-209ENST00000556353 PCDH7O60245 1069 aa4.76□□□□□ -1.65
PRPF39-209ENST00000556353 CTAGE8P0CG41 777 aa4.76□□□□□ -1.65
PRPF39-209ENST00000556353 MCCP23508 829 aa4.76□□□□□ -1.65
PRPF39-209ENST00000556353 PLIN5Q00G26 463 aa4.76□□□□□ -1.65
PRPF39-209ENST00000556353 PPIGQ13427 754 aaKnown RBP eCLIP4.76□□□□□ -1.65
PRPF39-209ENST00000556353 DECR1Q16698 335 aa4.76□□□□□ -1.65
PRPF39-209ENST00000556353 PRICKLE4Q2TBC4 344 aa4.76□□□□□ -1.65
PRPF39-209ENST00000556353 MYLK3Q32MK0 819 aa4.76□□□□□ -1.65
PRPF39-209ENST00000556353 FAM69AQ5T7M9 428 aa4.76□□□□□ -1.65
PRPF39-209ENST00000556353 SFMBT2Q5VUG0 894 aa4.76□□□□□ -1.65
PRPF39-209ENST00000556353 DPPA4Q7L190 304 aa4.76□□□□□ -1.65
PRPF39-209ENST00000556353 MAP7D3Q8IWC1 876 aa4.76□□□□□ -1.65
PRPF39-209ENST00000556353 CTAGE4Q8IX94 777 aa4.76□□□□□ -1.65
PRPF39-209ENST00000556353 ANKRD31Q8N7Z5 1873 aa4.76□□□□□ -1.65
PRPF39-209ENST00000556353 OR52I2Q8NH67 350 aa4.76□□□□□ -1.65
PRPF39-209ENST00000556353 APBB2Q92870 758 aa4.76□□□□□ -1.65
PRPF39-209ENST00000556353 LGALS12Q96DT0 336 aa4.76□□□□□ -1.65
PRPF39-209ENST00000556353 COG3Q96JB2 828 aa4.76□□□□□ -1.65
PRPF39-209ENST00000556353 HARBI1Q96MB7 349 aa4.76□□□□□ -1.65
PRPF39-209ENST00000556353 C17orf77Q96MU5 243 aa4.76□□□□□ -1.65
PRPF39-209ENST00000556353 ACOX2Q99424 681 aa4.76□□□□□ -1.65
PRPF39-209ENST00000556353 MOV10L1Q9BXT6 1211 aaKnown RBP4.76□□□□□ -1.65
PRPF39-209ENST00000556353 KIF9Q9HAQ2 790 aa4.76□□□□□ -1.65
PRPF39-209ENST00000556353 RRN3Q9NYV6 651 aa4.76□□□□□ -1.65
PRPF39-209ENST00000556353 GGA3Q9NZ52 723 aa4.76□□□□□ -1.65
PRPF39-209ENST00000556353 HAO1Q9UJM8 370 aa4.76□□□□□ -1.65
PRPF39-209ENST00000556353 ACSL5Q9ULC5 683 aa4.76□□□□□ -1.65
PRPF39-209ENST00000556353 KDRP35968 1356 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms