RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 MGAT1P26572 445 aa14.91□□□□□ -0.02
ACTN1-217ENST00000556203 CCKBRP32239 447 aa14.91□□□□□ -0.02
ACTN1-217ENST00000556203 SLC19A1P41440 591 aa14.91□□□□□ -0.02
ACTN1-217ENST00000556203 HALP42357 657 aa14.91□□□□□ -0.02
ACTN1-217ENST00000556203 MAGEA6P43360 314 aa14.91□□□□□ -0.02
ACTN1-217ENST00000556203 LSSP48449 732 aa14.91□□□□□ -0.02
ACTN1-217ENST00000556203 NPY2RP49146 381 aa14.91□□□□□ -0.02
ACTN1-217ENST00000556203 PPM1FP49593 454 aaPredicted RBP14.91□□□□□ -0.02
ACTN1-217ENST00000556203 PRLHRP49683 370 aa14.91□□□□□ -0.02
ACTN1-217ENST00000556203 PRAMEP78395 509 aa14.91□□□□□ -0.02
ACTN1-217ENST00000556203 SARNPP82979 210 aaKnown RBP14.91□□□□□ -0.02
ACTN1-217ENST00000556203 ACVR1Q04771 509 aa14.91□□□□□ -0.02
ACTN1-217ENST00000556203 ZFP36L1Q07352 338 aaKnown RBP14.91□□□□□ -0.02
ACTN1-217ENST00000556203 CLCA4Q14CN2 919 aa14.91□□□□□ -0.02
ACTN1-217ENST00000556203 CLPPQ16740 277 aaPredicted RBP14.91□□□□□ -0.02
ACTN1-217ENST00000556203 ANKRD22Q5VYY1 191 aa14.91□□□□□ -0.02
ACTN1-217ENST00000556203 PIM3Q86V86 326 aa14.91□□□□□ -0.02
ACTN1-217ENST00000556203 CREG2Q8IUH2 290 aa14.91□□□□□ -0.02
ACTN1-217ENST00000556203 TRIM48Q8IWZ4 208 aa14.91□□□□□ -0.02
ACTN1-217ENST00000556203 OR6P1Q8NGX9 317 aa14.91□□□□□ -0.02
ACTN1-217ENST00000556203 OR2L2Q8NH16 312 aa14.91□□□□□ -0.02
ACTN1-217ENST00000556203 OR10G6Q8NH81 332 aa14.91□□□□□ -0.02
ACTN1-217ENST00000556203 CPT1BQ92523 772 aa14.91□□□□□ -0.02
ACTN1-217ENST00000556203 PEX13Q92968 403 aa14.91□□□□□ -0.02
ACTN1-217ENST00000556203 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.91□□□□□ -0.02
ACTN1-217ENST00000556203 AHCYL2Q96HN2 611 aaKnown RBP14.91□□□□□ -0.02
ACTN1-217ENST00000556203 LINC00615Q96LM1 132 aaPredicted RBP14.91□□□□□ -0.02
ACTN1-217ENST00000556203 STRADBQ9C0K7 418 aa14.91□□□□□ -0.02
ACTN1-217ENST00000556203 ZMYND15Q9H091 742 aa14.91□□□□□ -0.02
ACTN1-217ENST00000556203 DDX47Q9H0S4 455 aaKnown RBP14.91□□□□□ -0.02
ACTN1-217ENST00000556203 SEMA6CQ9H3T2 930 aa14.91□□□□□ -0.02
ACTN1-217ENST00000556203 KCND1Q9NSA2 647 aa14.91□□□□□ -0.02
ACTN1-217ENST00000556203 POT1Q9NUX5 634 aa14.91□□□□□ -0.02
ACTN1-217ENST00000556203 SYBUQ9NX95 663 aa14.91□□□□□ -0.02
ACTN1-217ENST00000556203 FAM8A1Q9UBU6 413 aa14.91□□□□□ -0.02
ACTN1-217ENST00000556203 ARHGEF17Q96PE2 2063 aaPredicted RBP14.91□□□□□ -0.02
ACTN1-217ENST00000556203 CCDC187A0A096LP49 1063 aa14.9□□□□□ -0.02
ACTN1-217ENST00000556203 PMS2P1A4D2B8 440 aa14.9□□□□□ -0.02
ACTN1-217ENST00000556203 AGRPO00253 132 aa14.9□□□□□ -0.02
ACTN1-217ENST00000556203 TMEM63AO94886 807 aa14.9□□□□□ -0.02
ACTN1-217ENST00000556203 HOXB3P14651 431 aaPredicted RBP14.9□□□□□ -0.02
ACTN1-217ENST00000556203 CSF2RBP32927 897 aa14.9□□□□□ -0.02
ACTN1-217ENST00000556203 MAPK9P45984 424 aa14.9□□□□□ -0.02
ACTN1-217ENST00000556203 GPLD1P80108 840 aa14.9□□□□□ -0.02
ACTN1-217ENST00000556203 CFHR1Q03591 330 aa14.9□□□□□ -0.02
ACTN1-217ENST00000556203 ITIH4Q14624 930 aa14.9□□□□□ -0.02
ACTN1-217ENST00000556203 PPP1R7Q15435 360 aa14.9□□□□□ -0.02
ACTN1-217ENST00000556203 PHF19Q5T6S3 580 aa14.9□□□□□ -0.02
ACTN1-217ENST00000556203 METRNLQ641Q3 311 aa14.9□□□□□ -0.02
ACTN1-217ENST00000556203 FOXR1Q6PIV2 292 aa14.9□□□□□ -0.02
ACTN1-217ENST00000556203 SLITRK4Q8IW52 837 aa14.9□□□□□ -0.02
ACTN1-217ENST00000556203 OR4L1Q8NH43 312 aa14.9□□□□□ -0.02
ACTN1-217ENST00000556203 WDR36Q8NI36 951 aaKnown RBP14.9□□□□□ -0.02
ACTN1-217ENST00000556203 CXorf40BQ96DE9 158 aa14.9□□□□□ -0.02
ACTN1-217ENST00000556203 LIN37Q96GY3 246 aaPredicted RBP14.9□□□□□ -0.02
ACTN1-217ENST00000556203 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.9□□□□□ -0.02
ACTN1-217ENST00000556203 PSMD13Q9UNM6 376 aa14.9□□□□□ -0.02
ACTN1-217ENST00000556203 RAXQ9Y2V3 346 aa14.9□□□□□ -0.02
ACTN1-217ENST00000556203 ZNF106Q9H2Y7 1883 aaKnown RBP14.9□□□□□ -0.02
ACTN1-217ENST00000556203 COL27A1Q8IZC6 1860 aaPredicted RBP14.89□□□□□ -0.03
ACTN1-217ENST00000556203 PRAMEF33A0A0G2JMD5 474 aa14.89□□□□□ -0.03
ACTN1-217ENST00000556203 KLHL33A6NCF5 533 aa14.89□□□□□ -0.03
ACTN1-217ENST00000556203 SRRM3A6NNA2 597 aaPredicted RBP14.89□□□□□ -0.03
ACTN1-217ENST00000556203 DUX1O43812 170 aa14.89□□□□□ -0.03
ACTN1-217ENST00000556203 AVILO75366 819 aa14.89□□□□□ -0.03
ACTN1-217ENST00000556203 AP2A2O94973 939 aa14.89□□□□□ -0.03
ACTN1-217ENST00000556203 MPSTP25325 297 aa14.89□□□□□ -0.03
ACTN1-217ENST00000556203 NMBRP28336 390 aa14.89□□□□□ -0.03
ACTN1-217ENST00000556203 EPHA4P54764 986 aa14.89□□□□□ -0.03
ACTN1-217ENST00000556203 EIF3IQ13347 325 aaKnown RBP14.89□□□□□ -0.03
ACTN1-217ENST00000556203 SQSTM1Q13501 440 aa14.89□□□□□ -0.03
ACTN1-217ENST00000556203 RPE65Q16518 533 aa14.89□□□□□ -0.03
ACTN1-217ENST00000556203 FASTKD1Q53R41 847 aaKnown RBP14.89□□□□□ -0.03
ACTN1-217ENST00000556203 XKR5Q6UX68 686 aa14.89□□□□□ -0.03
ACTN1-217ENST00000556203 PACS1Q6VY07 963 aa14.89□□□□□ -0.03
ACTN1-217ENST00000556203 ZNF574Q6ZN55 896 aaPredicted RBP14.89□□□□□ -0.03
ACTN1-217ENST00000556203 TMEM26Q6ZUK4 368 aa14.89□□□□□ -0.03
ACTN1-217ENST00000556203 RAB11FIP2Q7L804 512 aa14.89□□□□□ -0.03
ACTN1-217ENST00000556203 KLHL7Q8IXQ5 586 aa14.89□□□□□ -0.03
ACTN1-217ENST00000556203 CFAP206Q8IYR0 622 aa14.89□□□□□ -0.03
ACTN1-217ENST00000556203 LSMEM2Q8N112 164 aa14.89□□□□□ -0.03
ACTN1-217ENST00000556203 FBXO39Q8N4B4 442 aa14.89□□□□□ -0.03
ACTN1-217ENST00000556203 CLDN19Q8N6F1 224 aa14.89□□□□□ -0.03
ACTN1-217ENST00000556203 HM13Q8TCT9 377 aa14.89□□□□□ -0.03
ACTN1-217ENST00000556203 CCM2Q9BSQ5 444 aa14.89□□□□□ -0.03
ACTN1-217ENST00000556203 KIFC1Q9BW19 673 aa14.89□□□□□ -0.03
ACTN1-217ENST00000556203 TBC1D10AQ9BXI6 508 aa14.89□□□□□ -0.03
ACTN1-217ENST00000556203 WWP1Q9H0M0 922 aa14.89□□□□□ -0.03
ACTN1-217ENST00000556203 VPS37BQ9H9H4 285 aa14.89□□□□□ -0.03
ACTN1-217ENST00000556203 UCK1Q9HA47 277 aa14.89□□□□□ -0.03
ACTN1-217ENST00000556203 TREX1Q9NSU2 369 aa14.89□□□□□ -0.03
ACTN1-217ENST00000556203 TMEM9Q9P0T7 183 aa14.89□□□□□ -0.03
ACTN1-217ENST00000556203 LOXL2Q9Y4K0 774 aa14.89□□□□□ -0.03
ACTN1-217ENST00000556203 PCDHGA8Q9Y5G5 932 aa14.89□□□□□ -0.03
ACTN1-217ENST00000556203 PRSS21Q9Y6M0 314 aa14.89□□□□□ -0.03
ACTN1-217ENST00000556203 CEP295Q9C0D2 2601 aa14.89□□□□□ -0.03
ACTN1-217ENST00000556203 ASPMQ8IZT6 3477 aa14.89□□□□□ -0.03
ACTN1-217ENST00000556203 CHD8Q9HCK8 2581 aa14.88□□□□□ -0.03
ACTN1-217ENST00000556203 MYLKQ15746 1914 aa14.88□□□□□ -0.03
ACTN1-217ENST00000556203 IGHV5-10-1A0A0J9YXX1 117 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms