RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 GPR21Q99679 349 aa8.21□□□□□ -1.1
ATXN3-235ENST00000556082 MIPEPQ99797 713 aa8.21□□□□□ -1.1
ATXN3-235ENST00000556082 OSBPL1AQ9BXW6 950 aa8.21□□□□□ -1.1
ATXN3-235ENST00000556082 CADM1Q9BY67 442 aaKnown RBP8.21□□□□□ -1.1
ATXN3-235ENST00000556082 TNKS2Q9H2K2 1166 aa8.21□□□□□ -1.1
ATXN3-235ENST00000556082 GSTO2Q9H4Y5 243 aa8.21□□□□□ -1.1
ATXN3-235ENST00000556082 ZNF385DQ9H6B1 395 aa8.21□□□□□ -1.1
ATXN3-235ENST00000556082 BPIFA1Q9NP55 256 aa8.21□□□□□ -1.1
ATXN3-235ENST00000556082 RAD18Q9NS91 495 aa8.21□□□□□ -1.1
ATXN3-235ENST00000556082 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.21□□□□□ -1.1
ATXN3-235ENST00000556082 ARMCX1Q9P291 453 aa8.21□□□□□ -1.1
ATXN3-235ENST00000556082 DKK3Q9UBP4 350 aa8.21□□□□□ -1.1
ATXN3-235ENST00000556082 SLCO3A1Q9UIG8 710 aa8.21□□□□□ -1.1
ATXN3-235ENST00000556082 TRMT6Q9UJA5 497 aaKnown RBP8.21□□□□□ -1.1
ATXN3-235ENST00000556082 ERVW-1Q9UQF0 538 aa8.21□□□□□ -1.1
ATXN3-235ENST00000556082 MYLKQ15746 1914 aa8.21□□□□□ -1.1
ATXN3-235ENST00000556082 GOLGA8QA0A0J9YX86 632 aa8.2□□□□□ -1.1
ATXN3-235ENST00000556082 GLYATL1P3A0A0U1RQE8 302 aa8.2□□□□□ -1.1
ATXN3-235ENST00000556082 UBA6A0AVT1 1052 aaPredicted RBP8.2□□□□□ -1.1
ATXN3-235ENST00000556082 GOLGA8OA6NCC3 632 aa8.2□□□□□ -1.1
ATXN3-235ENST00000556082 NEMP2A6NFY4 417 aa8.2□□□□□ -1.1
ATXN3-235ENST00000556082 B2RBV5 119 aa8.2□□□□□ -1.1
ATXN3-235ENST00000556082 GOLGA8NF8WBI6 632 aa8.2□□□□□ -1.1
ATXN3-235ENST00000556082 EIF3FO00303 357 aaPredicted RBP8.2□□□□□ -1.1
ATXN3-235ENST00000556082 PER2O15055 1255 aa8.2□□□□□ -1.1
ATXN3-235ENST00000556082 OR1I1O60431 355 aa8.2□□□□□ -1.1
ATXN3-235ENST00000556082 CLDN7O95471 211 aa8.2□□□□□ -1.1
ATXN3-235ENST00000556082 PRAMEF1O95521 474 aa8.2□□□□□ -1.1
ATXN3-235ENST00000556082 ATP6V1G2O95670 118 aa8.2□□□□□ -1.1
ATXN3-235ENST00000556082 MYOGP15173 224 aa8.2□□□□□ -1.1
ATXN3-235ENST00000556082 ZNF30P17039 623 aa8.2□□□□□ -1.1
ATXN3-235ENST00000556082 CCND1P24385 295 aa8.2□□□□□ -1.1
ATXN3-235ENST00000556082 NFKBIAP25963 317 aa8.2□□□□□ -1.1
ATXN3-235ENST00000556082 ACRV1P26436 265 aa8.2□□□□□ -1.1
ATXN3-235ENST00000556082 NOS3P29474 1203 aa8.2□□□□□ -1.1
ATXN3-235ENST00000556082 NNMTP40261 264 aa8.2□□□□□ -1.1
ATXN3-235ENST00000556082 RECQLP46063 649 aaPredicted RBP8.2□□□□□ -1.1
ATXN3-235ENST00000556082 STK19P49842 368 aaPredicted RBP8.2□□□□□ -1.1
ATXN3-235ENST00000556082 CDC16Q13042 620 aa8.2□□□□□ -1.1
ATXN3-235ENST00000556082 KLF10Q13118 480 aa8.2□□□□□ -1.1
ATXN3-235ENST00000556082 NAA25Q14CX7 972 aa8.2□□□□□ -1.1
ATXN3-235ENST00000556082 HERC3Q15034 1050 aa8.2□□□□□ -1.1
ATXN3-235ENST00000556082 PTPRRQ15256 657 aa8.2□□□□□ -1.1
ATXN3-235ENST00000556082 SLC9B1Q4ZJI4 515 aa8.2□□□□□ -1.1
ATXN3-235ENST00000556082 VWA5B1Q5TIE3 1220 aa8.2□□□□□ -1.1
ATXN3-235ENST00000556082 TMEM215Q68D42 235 aa8.2□□□□□ -1.1
ATXN3-235ENST00000556082 METTL2BQ6P1Q9 378 aaKnown RBP8.2□□□□□ -1.1
ATXN3-235ENST00000556082 TMEM184AQ6ZMB5 413 aa8.2□□□□□ -1.1
ATXN3-235ENST00000556082 RINLQ6ZS11 566 aa8.2□□□□□ -1.1
ATXN3-235ENST00000556082 SPRED2Q7Z698 418 aa8.2□□□□□ -1.1
ATXN3-235ENST00000556082 CUZD1Q86UP6 607 aa8.2□□□□□ -1.1
ATXN3-235ENST00000556082 SERPINA9Q86WD7 417 aa8.2□□□□□ -1.1
ATXN3-235ENST00000556082 CLYBLQ8N0X4 340 aa8.2□□□□□ -1.1
ATXN3-235ENST00000556082 NXPE1Q8N323 547 aa8.2□□□□□ -1.1
ATXN3-235ENST00000556082 CHCHD4Q8N4Q1 142 aa8.2□□□□□ -1.1
ATXN3-235ENST00000556082 FAM13CQ8NE31 585 aa8.2□□□□□ -1.1
ATXN3-235ENST00000556082 TTC16Q8NEE8 873 aa8.2□□□□□ -1.1
ATXN3-235ENST00000556082 OR6K2Q8NGY2 324 aa8.2□□□□□ -1.1
ATXN3-235ENST00000556082 CEP70Q8NHQ1 597 aa8.2□□□□□ -1.1
ATXN3-235ENST00000556082 CD200R1Q8TD46 325 aa8.2□□□□□ -1.1
ATXN3-235ENST00000556082 SMG7Q92540 1137 aaKnown RBP8.2□□□□□ -1.1
ATXN3-235ENST00000556082 FUBP1Q96AE4 644 aaKnown RBP8.2□□□□□ -1.1
ATXN3-235ENST00000556082 ULK4Q96C45 1275 aa8.2□□□□□ -1.1
ATXN3-235ENST00000556082 RPL10LQ96L21 214 aaKnown RBP8.2□□□□□ -1.1
ATXN3-235ENST00000556082 LRRC3BQ96PB8 259 aa8.2□□□□□ -1.1
ATXN3-235ENST00000556082 OR52B2Q96RD2 323 aa8.2□□□□□ -1.1
ATXN3-235ENST00000556082 HEPHQ9BQS7 1158 aa8.2□□□□□ -1.1
ATXN3-235ENST00000556082 KRTAP4-8Q9BYQ9 185 aa8.2□□□□□ -1.1
ATXN3-235ENST00000556082 CLPBQ9H078 707 aa8.2□□□□□ -1.1
ATXN3-235ENST00000556082 ASB8Q9H765 288 aa8.2□□□□□ -1.1
ATXN3-235ENST00000556082 BRD9Q9H8M2 597 aa8.2□□□□□ -1.1
ATXN3-235ENST00000556082 AKTIPQ9H8T0 292 aa8.2□□□□□ -1.1
ATXN3-235ENST00000556082 SFXN1Q9H9B4 322 aa8.2□□□□□ -1.1
ATXN3-235ENST00000556082 MEAF6Q9HAF1 191 aa8.2□□□□□ -1.1
ATXN3-235ENST00000556082 PIDD1Q9HB75 910 aa8.2□□□□□ -1.1
ATXN3-235ENST00000556082 DZANK1Q9NVP4 752 aa8.2□□□□□ -1.1
ATXN3-235ENST00000556082 DUS2Q9NX74 493 aaKnown RBP8.2□□□□□ -1.1
ATXN3-235ENST00000556082 GDE1Q9NZC3 331 aa8.2□□□□□ -1.1
ATXN3-235ENST00000556082 NFKBIL1Q9UBC1 381 aaPredicted RBP8.2□□□□□ -1.1
ATXN3-235ENST00000556082 GNPTGQ9UJJ9 305 aa8.2□□□□□ -1.1
ATXN3-235ENST00000556082 SLC8A2Q9UPR5 921 aa8.2□□□□□ -1.1
ATXN3-235ENST00000556082 CDYLQ9Y232 598 aa8.2□□□□□ -1.1
ATXN3-235ENST00000556082 FAM50BQ9Y247 325 aa8.2□□□□□ -1.1
ATXN3-235ENST00000556082 TRAF6Q9Y4K3 522 aa8.2□□□□□ -1.1
ATXN3-235ENST00000556082 WNT6Q9Y6F9 365 aa8.2□□□□□ -1.1
ATXN3-235ENST00000556082 IGLV3-16A0A075B6K0 115 aa8.19□□□□□ -1.1
ATXN3-235ENST00000556082 NPIPB15A6NHN6 443 aaPredicted RBP8.19□□□□□ -1.1
ATXN3-235ENST00000556082 SDHDO14521 159 aa8.19□□□□□ -1.1
ATXN3-235ENST00000556082 UBFD1O14562 309 aaKnown RBP8.19□□□□□ -1.1
ATXN3-235ENST00000556082 CHUKO15111 745 aa8.19□□□□□ -1.1
ATXN3-235ENST00000556082 NIPSNAP2O75323 286 aa8.19□□□□□ -1.1
ATXN3-235ENST00000556082 ECI2O75521 394 aa8.19□□□□□ -1.1
ATXN3-235ENST00000556082 SUPT7LO94864 414 aa8.19□□□□□ -1.1
ATXN3-235ENST00000556082 CYP17A1P05093 508 aa8.19□□□□□ -1.1
ATXN3-235ENST00000556082 ENO1P06733 434 aaKnown RBP8.19□□□□□ -1.1
ATXN3-235ENST00000556082 CBSLP0DN79 551 aa8.19□□□□□ -1.1
ATXN3-235ENST00000556082 THRAP10827 490 aa8.19□□□□□ -1.1
ATXN3-235ENST00000556082 CYP2A6P11509 494 aaPredicted RBP8.19□□□□□ -1.1
ATXN3-235ENST00000556082 ADH5P11766 374 aa8.19□□□□□ -1.1
ATXN3-235ENST00000556082 HNRNPLP14866 589 aaKnown RBP eCLIP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms